Parus major (Great Tit): 107208280
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Entry
107208280 CDS
T04864
Symbol
PRPF38A
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107208280 (PRPF38A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmaj03041
]
107208280 (PRPF38A)
Spliceosome [BR:
pmaj03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
107208280 (PRPF38A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
GIP4
Motif
Other DBs
NCBI-GeneID:
107208280
NCBI-ProteinID:
XP_015492004
Ensembl:
ENSPMJG00000001097
LinkDB
All DBs
Position
8:25592693..25596438
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AA seq
312 aa
AA seq
DB search
MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKYVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHEERVCDIILPRLQKRYVLEEAEQLEPR
VSALEEDMDDVESSEEEEEEDEKLERIPSPDHRRRGYRDLDKPRRSPVVRYRRSRSRSPR
RRSRSPKRRSPSPRRERHRSKSPRRHRSRSRERRHRSRSKSPGHHRSHRHRSHSKSPERS
KKSHKKSRRGNE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggccaaccgcacggtgaaagacgcgcacagcatccacggcaccaacccgcagtacctg
gtggagaagatcatccgcacgcgcatctacgagtccaagtactggaaggaggagtgtttc
ggcctcacggccgagctggtggtggacaaggccatggagctgaagtacgtagggggcgtc
tatggagggaacattaaacccacgcccttcttgtgcctgacgctaaagatgctgcagatc
cagcccgagaaggacatcattgtggagttcataaaaaacgaagacttcaagtatgtccga
atgcttggagcactgtacatgagactgacaggcactgccatcgactgctacaagtacctg
gaaccgctgtacaatgactatcggaaaattaaaagtcagaacagaaatggggaatttgag
ctgatgcatgtggatgaatttattgatgagctactccacgaagaacgtgtttgtgacatc
atcctgcctcgactgcagaaacggtatgttctggaagaagctgaacaacttgagcctcgt
gttagtgctctggaagaagatatggatgatgtagaatctagtgaggaggaggaagaagaa
gatgaaaagctggaacggatcccatctcctgaccaccgcaggaggggctacagggacctg
gacaagccccgcagatctccggtggtgcggtaccggcggagccggagcaggtccccaagg
aggcgcagccgctctccaaagagaagaagcccatcaccgcgccgggagcggcatcgcagc
aaaagcccaagacggcaccggagcagatcccgggagaggcgccacagatcgagatcgaaa
tctccagggcatcaccgcagtcacagacacagaagtcattccaaatcacctgaaagatct
aagaaaagtcacaaaaagagtcggcgagggaatgaataa
DBGET
integrated database retrieval system