KEGG   Parus major (Great Tit): 107208280
Entry
107208280         CDS       T04864                                 
Symbol
PRPF38A
Name
(RefSeq) pre-mRNA-splicing factor 38A
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
pmaj  Parus major (Great Tit)
Pathway
pmaj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pmaj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107208280 (PRPF38A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pmaj03041]
    107208280 (PRPF38A)
Spliceosome [BR:pmaj03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    107208280 (PRPF38A)
SSDB
Motif
Pfam: PRP38 PRP38_assoc GIP4
Other DBs
NCBI-GeneID: 107208280
NCBI-ProteinID: XP_015492004
Ensembl: ENSPMJG00000001097
LinkDB
Position
8:25592693..25596438
AA seq 312 aa
MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKYVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHEERVCDIILPRLQKRYVLEEAEQLEPR
VSALEEDMDDVESSEEEEEEDEKLERIPSPDHRRRGYRDLDKPRRSPVVRYRRSRSRSPR
RRSRSPKRRSPSPRRERHRSKSPRRHRSRSRERRHRSRSKSPGHHRSHRHRSHSKSPERS
KKSHKKSRRGNE
NT seq 939 nt   +upstreamnt  +downstreamnt
atggccaaccgcacggtgaaagacgcgcacagcatccacggcaccaacccgcagtacctg
gtggagaagatcatccgcacgcgcatctacgagtccaagtactggaaggaggagtgtttc
ggcctcacggccgagctggtggtggacaaggccatggagctgaagtacgtagggggcgtc
tatggagggaacattaaacccacgcccttcttgtgcctgacgctaaagatgctgcagatc
cagcccgagaaggacatcattgtggagttcataaaaaacgaagacttcaagtatgtccga
atgcttggagcactgtacatgagactgacaggcactgccatcgactgctacaagtacctg
gaaccgctgtacaatgactatcggaaaattaaaagtcagaacagaaatggggaatttgag
ctgatgcatgtggatgaatttattgatgagctactccacgaagaacgtgtttgtgacatc
atcctgcctcgactgcagaaacggtatgttctggaagaagctgaacaacttgagcctcgt
gttagtgctctggaagaagatatggatgatgtagaatctagtgaggaggaggaagaagaa
gatgaaaagctggaacggatcccatctcctgaccaccgcaggaggggctacagggacctg
gacaagccccgcagatctccggtggtgcggtaccggcggagccggagcaggtccccaagg
aggcgcagccgctctccaaagagaagaagcccatcaccgcgccgggagcggcatcgcagc
aaaagcccaagacggcaccggagcagatcccgggagaggcgccacagatcgagatcgaaa
tctccagggcatcaccgcagtcacagacacagaagtcattccaaatcacctgaaagatct
aagaaaagtcacaaaaagagtcggcgagggaatgaataa

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