Parus major (Great Tit): 107208636
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Entry
107208636 CDS
T04864
Symbol
U2SURP
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
KO
K12842
U2-associated protein SR140
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107208636 (U2SURP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmaj03041
]
107208636 (U2SURP)
Spliceosome [BR:
pmaj03041
]
Complex A
U2 snRNP components
U2 related factors
107208636 (U2SURP)
Complex B
107208636 (U2SURP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Surp
RRM_1
cwf21
CID
CTK3
SET_assoc
RRM_7
Motif
Other DBs
NCBI-GeneID:
107208636
NCBI-ProteinID:
XP_015492624
Ensembl:
ENSPMJG00000018596
LinkDB
All DBs
Position
9:10762652..10806913
Genome browser
AA seq
1001 aa
AA seq
DB search
MADKAPGGSQKPAGKVRGPDAVHTTGSADSHPLMESKLKAFSIGKMSAAKRTLSKKEQEE
LKKKEDEKAAAEIYEEFLAAFEGGDGNKVKTFVRGGIVNASKEEHETDEKRGKIYKPSSR
FSDQKNQPSQPSNEKPPSLLMIETKKPTLPKNKNKQTTLPGPLKKGEKEKKKSNLELFKE
ELKQIQEERDERHKTKGRLSRFEPPQSDSDGQRRSMDAPSRRNRSSGVLDDYAPGSHDVG
DPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRR
DAERALKNLNGKMIMSFEMKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRE
RLKNPNAPMLPPPKNKEDFEKTLSQAIVKVVIPTERNLLALIHRMIEFVVREGPMFEAMI
MNREINNPMFRFLFENQTPAHVYYRWKLYSILQGDAPTKWRTEDFRMFKNGSFWRPPPLN
PYLHGMSEEQETEAFVEEPNKKGALKEEQRDKLEEILRGLTPRKNDIGDAMVFCLNNAEA
AEEIVDCITESLSILKTPLPKKIARLYLVSDVLYNSSAKVANASYYRKFFETKLCQIFSD
LNATYRTIQGHLQSENFKQRVMTCFRAWEDWAIYPEPFLIKLQNIFLGLVNIMEDKETEE
VPDDLDGAPIEEELDGAPLEDVDGIPIDTAPIDDLDGVPIKSLDDDLDGVPLDTTEDSKK
NEPIFKVAPSKWEAVDESELEAQAVTTSKWELFDQHEESEEEEIQNQEEESEDEEDTQSS
KSEEQHMYSNPIKEEMPESKSSVKYSEMSEEKRAKLREIELKVMKFQDELESGKRPKKPG
QSFQEQVEHYRDKLLQREKEKEMERERDRDKKDKEKSETRSKDKKEKEECTPTRKERKRR
HSASPSPSRSSGSRRAKSPSPKSERSERSERSHKESSRSRSSHKDSPRDVSKKGKRSPSG
SRTPKRSRRSRSRSPKKSGKKSRSQSRSPHRSHKKSKKSKH
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaggcgcccggcggctcgcagaaacccgccgggaaggtcagggggccagat
gcagtacataccactggatctgctgattcacatcctctaatggaaagtaaacttaaagca
ttcagtattggcaaaatgagtgctgccaaacggactctgagcaagaaagagcaagaagaa
ttaaaaaagaaggaggatgagaaggctgctgcagaaatttatgaagaattccttgctgcc
tttgaaggaggtgatggtaataaagtgaaaacatttgtaagaggaggaatcgttaatgca
tctaaagaggagcatgaaacagatgagaaacggggtaaaatctataaaccttcgtcacga
ttctcagatcaaaaaaatcaaccaagtcagccatctaatgagaaacctccatccctccta
atgatagaaaccaaaaagcctaccctccccaaaaacaaaaacaaacaaacaactttgcct
gggcctttgaagaaaggagagaaggaaaagaaaaagagtaatttggaactttttaaagag
gaattaaagcaaatccaagaggagcgtgatgaaaggcacaaaacaaaaggtagattgagt
cgttttgaaccaccccagtctgattcagatgggcagcggcgttcgatggatgctccttca
agaagaaacagatcatctggtgtactggatgattatgcaccagggtcacatgatgttgga
gatccaagcacaacaaatttgtatctgggaaacatcaatcctcagatgaatgaagagatg
ttatgtcaagaatttggccgctttggaccattagcaagtgttaaaattatgtggccaaga
actgatgaagaaagagcaagagaaagaaattgtggctttgttgcctttatgaacaggaga
gatgctgaaagagcattgaagaatttaaatggcaagatgattatgtcgtttgaaatgaag
ctgggctggggcaaagctgtacctataccaccacatccaatctacattccgccttccatg
atggagcacaccctgccaccgcccccgtcaggactgcccttcaatgcccagcctagggag
agattgaagaaccctaatgctccaatgttaccaccaccaaaaaacaaggaagattttgag
aagactctgtcgcaagccatagtcaaagtggttatcccaacagaaaggaatttgctcgct
ttgatacatcgaatgatagagtttgtggttcgggaagggcccatgttcgaagccatgatc
atgaaccgagaaatcaacaacccaatgttcaggtttttatttgaaaaccagactccagcc
catgtatattatagatggaagctttattcaattcttcagggggatgctccaaccaaatgg
aggacagaagatttccgtatgttcaaaaatggatccttctggaggccaccaccattgaat
ccatacttgcatgggatgtcagaagagcaagaaacagaagcatttgtggaggagccgaac
aagaagggtgcacttaaggaagaacagagggacaaactagaggaaattctacgtggatta
acacctcggaagaatgatattggtgacgcaatggttttctgtctaaataatgcagaagct
gctgaagaaattgtggactgcattacagagtcattatccatcctcaagactcctcttcct
aagaagattgcaagattgtatttagtgtcggatgtgttatacaactcttcagctaaagtt
gccaatgcttcctactatagaaaattttttgaaacaaaattatgtcagatattctctgat
ctcaatgctacttaccgtacaatacaaggccatttacagtctgaaaatttcaagcaacgg
gtgatgacatgcttccgagcatgggaagactgggcaatctatccagagccatttctgatc
aaactgcagaatattttcttggggcttgtaaatatcatggaagataaagaaacagaggaa
gtaccggatgatcttgatggtgctcccattgaggaagagctcgatggtgctccactagaa
gatgtggatggaattcctattgatactgctcctattgatgatctggatggagtcccaatt
aaatcactggatgatgatcttgatggcgttcctttggatacaactgaagactcaaaaaag
aatgagcctatatttaaagttgccccttcgaagtgggaagcagtggatgaatcagaactg
gaagctcaagctgttactacttctaagtgggagctttttgaccaacatgaagaatctgag
gaggaagaaattcaaaatcaagaagaagaaagtgaagatgaagaagacacacagagttct
aagtcagaagaacaacacatgtattccaatcctattaaagaggaaatgcctgaatccaag
tcatcagtcaaatattcagaaatgagtgaagaaaagcgtgccaaactccgagagatagag
cttaaggtgatgaagtttcaggatgagttagagtctgggaaaagacccaagaagccaggc
cagagttttcaggaacaggttgaacactatagagacaagctgctccagagggaaaaagaa
aaagagatggaaagagaacgggacagagacaaaaaggacaaggaaaagtctgagaccagg
tccaaagataagaaggaaaaggaggaatgcacaccaacacggaaagagaggaaaaggcgg
cacagcgcttcccccagcccgtcccgcagcagcggcagccgccgagccaagtcaccctcg
cccaaatcggaacgctccgagcgctccgaacgctcccacaaggagagctcccgctcccgc
tcctcacacaaagattctcccagagatgtcagtaaaaaaggcaaaaggtcgccatctggc
tccaggacacccaaaagatcaagaagatcacgatccagatcccctaaaaagtcagggaag
aaatccaggtctcagtcccgttctcctcacagatctcacaagaagtcaaagaaaagcaaa
cactga
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