Parus major (Great Tit): 107208638
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Entry
107208638 CDS
T04864
Symbol
TRPC1
Name
(RefSeq) short transient receptor potential channel 1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmaj04040
]
107208638 (TRPC1)
Ion channels [BR:
pmaj04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
107208638 (TRPC1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
Dsc3_C
MTR4-like_stalk
LHD_TRPY1
RIN1
Motif
Other DBs
NCBI-GeneID:
107208638
NCBI-ProteinID:
XP_015492630
Ensembl:
ENSPMJG00000018593
LinkDB
All DBs
Position
9:10684832..10702241
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AA seq
781 aa
AA seq
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MAALYQSADPSASASPNKLLALKDVRQVKEETTLDEKLFLLACDKGDYYMVKKLLEENSS
GEMNINCVDVLGRNAVTITIENENLDILQLLLDYGCQSSDALLVAIDSEVVGAVDILLNH
RPKRSSRPTIVKLMERIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQDISLPKPHAVG
CECTLCTAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFELSADLKELSLVEV
EFRNDYEELAQQCKTFAKDLLAQARNSRELEVILNHTSSDEHVDKRGLLEERMNLSRLKL
AIKYNQKEFVAQSNCQQFLNTVWFGQMAGYRRKHTCKKILTVLMVGIFWPVLSLCYLLAP
KSRVGRIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNENKKNTMGPALERIDYLLIIWLI
GMVWSDVKRLWYDGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNKFHDYAERKDWDAF
HPTLVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQDFGKFLGMFLLVLFSFT
IGLTQLYDKGFTVNEEKDCAGIFCEQQSNDTFHSFIGTCFALFWYIFSLAHVAIFVTRFS
YGEELQSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKEWKFARAKLWLSYF
DDKCTLPPPFNVIPSPKTICYLFNSLSKWICSHTSSGKVKRQNSLKEWRNLKQKRDENYQ
KVMCCLVHRYLTSMRQKMQSTDQATVENLNELRQDLSKFRNEMRDLLGFRTSKYAMFYPR
N
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggccgccctgtaccagagcgcggacccgtccgcctcggcctcgcccaacaagctgctg
gcgctgaaggatgtgcggcaggtgaaggaggagaccacgctggacgagaagcttttcctg
ctggcatgcgacaaaggtgactattacatggttaagaaactcttagaggaaaacagctca
ggtgaaatgaacataaattgtgtggatgtgcttgggcgaaatgctgttaccataaccatt
gaaaatgaaaacttggacatactacagctgcttttagattatggctgccagtcctcggat
gcacttttggtggctattgactcagaagtggtgggagctgttgatattctacttaatcac
cgaccaaaacgatcctccagaccaaccattgtgaaattaatggagcgcattcagaaccca
gagtactcaacaaccatggatgtagcaccagtaattttagctgctcatcgtaacaactat
gaaattctcaccatgctgttgaagcaagacatatcattacccaaaccccatgctgtgggc
tgtgagtgcacactgtgcactgccaagaacaaaaaagacagtctgcggcattccaggttt
cgtcttgacatttatcggtgtttggccagtcctgccttaataatgttaacagaggaggat
ccaattctaagagcttttgaacttagtgcagacttgaaagaattaagccttgttgaggtt
gagttcagaaatgattatgaggagctcgctcaacagtgcaaaacctttgctaaagatttg
cttgcacaagcacggaattcccgggagctggaagtcattctgaatcacacctccagtgat
gaacatgtagacaagcgaggattgttggaagagaggatgaacttaagccgcttaaaactt
gcaatcaagtataatcaaaaagagtttgttgcccagtccaactgccagcagtttctcaac
acagtgtggttcgggcagatggccggctatcggcgcaagcacacttgcaagaagatcctg
actgttctgatggttggcattttctggccagttctgtccctgtgttacttgttagctcct
aaatctcgagtaggtcgaataattcacactccttttatgaagtttattattcacggagct
tcatatttcacatttctgttattacttaatttgtactcccttgtctacaatgagaataag
aagaatacaatgggaccagcccttgagagaatagactatcttctgataatatggcttatt
ggaatggtgtggtcagatgttaagaggctctggtatgatggtttagaagattttttagaa
gaatcccgcaatcagcttagttttgtcatgaattccctgtatttggcaacttttgccctc
aaagttgttgcccataacaagtttcatgattatgctgaaaggaaggactgggatgcattc
catcctaccctagtggcagaaggtctttttgcctttgccaatgttcttagttacctgcgt
ctcttcttcatgtacacaaccagctccattctgggaccactccagatttcaatgggccag
atgctacaagattttggaaaatttctgggcatgtttcttcttgtcttgttctcattcaca
attggattgacccaactttatgataaaggatttactgtaaatgaagaaaaggactgtgcg
ggcattttctgtgaacaacagagcaatgacacgttccattcgtttattggtacatgtttt
gctctcttctggtacatattctccctggcacatgtcgcaatctttgtgacacgttttagc
tatggtgaagaattacagtcttttgtgggtgctgttattgttgggacctacaacgtggtg
gttgtgatagtattaactaaactcctagtggcaatgcttcataaaagttttcagctgata
gcaaatcatgaagataaggagtggaagtttgctcgtgccaagctctggcttagctacttc
gatgataaatgcacgctccctccacctttcaacgttatcccctctcccaagactatttgt
taccttttcaacagtctcagtaaatggatctgctctcatacatcaagtggcaaagtgaaa
cgtcagaacagcctcaaggaatggagaaatctgaagcagaagagagatgagaattaccaa
aaggtgatgtgttgcttagtccaccgttacttgacttccatgaggcagaaaatgcaaagt
acggatcaggccacagtggaaaacctcaacgaactgcggcaggacttgtcaaagttccgg
aatgaaatgagagacctgcttggcttccgaacttctaagtatgctatgttttatccaaga
aactaa
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