Parus major (Great Tit): 107208760
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Entry
107208760 CDS
T04864
Symbol
RUBCN
Name
(RefSeq) run domain Beclin-1-interacting and cysteine-rich domain-containing protein isoform X1
KO
K19330
run domain Beclin-1 interacting and cysteine-rich containing protein
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107208760 (RUBCN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmaj04131
]
107208760 (RUBCN)
Membrane trafficking [BR:
pmaj04131
]
Autophagy
Other autophagy associated proteins
Others
107208760 (RUBCN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUBC_PIKBD
RUN
Motif
Other DBs
NCBI-GeneID:
107208760
NCBI-ProteinID:
XP_015493030
Ensembl:
ENSPMJG00000019607
LinkDB
All DBs
Position
9:complement(15512692..15542512)
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AA seq
1047 aa
AA seq
DB search
MEIGPHAGHAESRKEHWKLLGNLKTTVEGLVSISNPNVWSKYGGLERLCRDMHSILYHGL
MHDKVCCRQKDYWHFVKDIRWLSPGSAHHLEKFISLQESGQRDPEGPGDQAIAQLWLQHS
LQCHCLSAQLRPLLENRQYIRKFYTDTAFLLSDAHVTAMLQCLEAVEQNNPRLLAQIDTS
MLAGTSLPSLCASDPSAGTREMCDHSGEGQKSRLPGALGCLDHFTESLLTRKSDNPSPVT
KSQSLTALPASPSVPAATCTQQRCFGSFSSLQHPASSGLPDRRPVSSCGSSNSSQPQERC
PSTRSSSFSEGRSPLEQPSSVTRFHVPSPKDPVFPASEMSSSTTSQSEDTWTGSQDDPQS
DVNDGPEYLAIGNSGRRGRACSSTSTSSTKSSSSKLFSSSSSQKLDSVSSLGEQGASGGG
SRGLSLLRRSSFSEGQSSAPQGILKKSHVRSHSDTNVTSGKLHGGLRDITIIIEDPVAES
HGDPSGGRGPISASTQSSELSTPSSLYMEYDSGQYLSSGEGMFRRPSEGQSLISYLSEQD
FGSCADLEKENAHFSISESLIAAIELMKCNMMSRQLEEEEEDSDKEIQELKQKIRIRRQQ
IRTRHLFPTCQEMGSDSLVATDSGSQFSSHGSMRLSDSGSAEDVEEYEIRDGNDGSNLIQ
MSKNGLSVSMASLFSDADIKRNPDSSRKSFLSSDSISHSFLNSNSAEAVAMGLLKQFEGM
QLPAASELEWLVPEHDAPQKLLPIPDSLPISPDDGEHADIYKLRIRVRGNLEWAPPRPQI
IFNVHPALARKVAVAKQNYRCAGCGIRTDPDYIKRLRYCEYLGKYFCQCCHENAQTVIPS
RILRKWDFSRYYVSNFSKDLLSKIWSDPLFNVQAINPALYQKVKALNQVRLLRIQLFHMK
NMFKTCRLAKDLLDSFDTVPGHLTEDLHLYSLSDFSAIKKGDLMPRLTELLKAGSLHVDK
CMLCQAKGFICEFCQNEDDIIFPFELNKCKTCEECKACYHKSCFKSTRCPRCERLQARRE
LMAKPSLESYISDYEDELEQPEAVAAT
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atggagatcgggccccacgcggggcacgcggagagccggaaggagcactggaagctcctt
ggcaacctgaagaccacagtggaaggtttggtgtctataagcaacccaaatgtctggtcc
aagtatggcggcttggaacggctctgcagagacatgcacagcatcctctaccatgggctc
atgcatgacaaggtgtgctgcagacagaaggattactggcactttgtgaaggacattcgc
tggctgagtccaggctctgctcatcatttggagaagttcatcagcctgcaggagagtggc
cagcgtgaccccgagggcccaggggaccaggccattgcgcagctgtggctgcagcacagc
ctgcagtgccactgcctgtcagcgcagctgaggccgctcctggagaaccggcagtacatc
aggaagttctacacagatactgccttcctgctcagtgacgcccacgtcacggccatgctg
cagtgcctggaagctgttgagcagaacaaccccaggcttctggctcagatcgacacttcc
atgctggccggcacgtcactgccgtccctgtgcgcgtcagacccttctgctgggacaaga
gagatgtgtgatcacagtggtgagggacaaaagagccgtctgccaggagcgctgggctgc
ctggatcatttcactgagagcctgcttaccaggaagagtgacaatccttctccagtgaca
aagagtcagagcctgactgccctccctgcatccccgagtgtccctgctgccacctgcaca
cagcagcgctgctttgggtccttctccagcctccagcatccagcctcctctggcctccca
gacaggagaccagtgagttcctgtggcagctccaactccagccagccccaggagcgctgc
ccgtccacccggtcctcctccttcagtgagggcaggtcccctctggagcagcccagctct
gtcacccgcttccacgtcccctcacccaaagaccccgtctttccagccagcgagatgagc
tccagcaccaccagccagagcgaggacacttggacagggagtcaggatgatccacagagt
gatgttaatgacgggccggagtacctggccattgggaactcgggacgccggggccgggca
tgcagcagcaccagcaccagcagcaccaagagcagtagctccaaactcttctcctccagc
agctcccagaagctggactcagtatcatccctgggggagcagggagcaagtggaggtggc
agcaggggcctgagcctgttgcgccggtccagcttctcagagggacagtcttcagctcca
cagggcatcctcaagaagagccacgtgcgctcacactctgacaccaatgtgacttctggg
aagttgcacggaggcctcagggatatcaccattataatagaagatccagtggcagagtcc
catggtgatccaagtggagggagagggcccatctctgcttccacacagagcagtgaactg
agtacacccagctccctctacatggagtatgactctggacagtacctgagctcgggggaa
gggatgttcaggagaccttcagaagggcagtccctcatcagctatctctctgagcaggac
tttggcagctgtgcagacctggagaaggagaatgcccacttcagcatctcagagtccctg
atcgctgccattgagctgatgaagtgcaacatgatgagccggcagctggaggaggaggaa
gaagacagtgacaaggagatccaggagcttaaacaaaagattcgcattcggcgccagcag
atccgcaccagacacctgttccctacctgccaggagatgggctcagacagtctcgtggca
acagacagcgggtcccagttcagctcccatggctccatgcggctctctgactctggctct
gcagaggatgtggaagagtacgagatccgagatggtaacgatggatctaacctgattcaa
atgtccaagaacggcctctcagtgtcaatggcttccttgttctcagatgcagacatcaag
aggaacccagactccagcaggaagtcctttctctcctcagactccatatcccactccttc
ctcaattcaaactcggcagaggcggtggccatgggcttgctgaagcagtttgagggcatg
caactcccagctgcctctgaattggagtggctggtccctgagcatgacgccccacagaag
ctcctgcccatccctgactctctgcctatctctccggacgatggagagcacgccgacatc
tacaagttgaggattcgggtgcgcggaaacctggagtgggccccgccgcgaccgcagatc
atcttcaatgttcacccagccctagcgaggaaggtggctgtggccaaacagaattaccgg
tgtgcaggctgtggcatccggactgatcctgattacatcaagcggctgcggtactgtgaa
tacctgggcaagtatttctgccagtgctgccacgagaacgcccagaccgtcatccccagc
cgcatcctgcgcaagtgggacttcagcaggtactatgtgagcaacttctccaaagacctg
ctgagcaagatctggagtgacccactcttcaacgtgcaagctatcaatcctgccctgtac
cagaaagtgaaagctctcaaccaagtgcggctgctgcgaatccagcttttccacatgaag
aacatgttcaagacgtgccggctagctaaagacctcctggactcctttgacacagtgcct
ggccacttgaccgaggatttgcacctctactcgctgagtgacttcagtgccatcaaaaaa
ggggacctgatgcctcgcctgacagagctcctgaaggcaggcagcctgcacgttgacaag
tgcatgttgtgccaagccaaaggcttcatctgtgagttctgccagaatgaggatgacata
atcttcccctttgagctcaacaagtgcaagacatgtgaagagtgcaaagcctgctaccac
aaatcctgcttcaaatccacccgctgtccccggtgcgagcgtcttcaagcccggagagag
ctgatggccaagccgagcctggagtcctacatctcggactacgaagatgagctggagcag
ccggaggcagtggcagccacatga
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integrated database retrieval system
