Parus major (Great Tit): 107208785
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Entry
107208785 CDS
T04864
Symbol
HPS3
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein isoform X1
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmaj04131
]
107208785 (HPS3)
Membrane trafficking [BR:
pmaj04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
107208785 (HPS3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
Motif
Other DBs
NCBI-GeneID:
107208785
NCBI-ProteinID:
XP_015493117
Ensembl:
ENSPMJG00000007142
LinkDB
All DBs
Position
9:complement(25032126..25053856)
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AA seq
1009 aa
AA seq
DB search
MVQLYNLHPFGSQRVVPCKQEPSHFCCGQDVLFVASTAASCKVEVFAVHEQGRCEALGSF
ATLGPVLRMAHSSTGDYLVTIEEKSKATFLRAYMNWRCMSAGSSRVCVRMVGHKMEESYS
ETFKEQMSVVEMPLSDPPLCISCCPVNGDLLVGCKNKLVMFCLKYRVINQNLTVLDFERS
LILHINNLIPAEVAFCARHIAVTTELDVLMLKLELVQQRADRTEQCAQAVNAPEKAVDGG
VKDESTSTDPLQLELDEFIICQKPVELLGEESKLCEIPITLESTELPTEDTKHFQVRYLL
FRRFAPHQSPFGFCEETKLHSVQLLPVYQTGISTTAYEETENKRKLLSLFCFFSLPYVGY
LYSIGKLVELISTYQYSEKSEQAVLTPQFLHVITSQSLQCFTVRCSAAAARGEDPYIDTT
VKACPPVTLDVCTLRMQLFIGPRAICHFKNHIILLTKADTEDITERRKPTRRMLSRKTDS
IKSRTNSESEPGWNLYIINTVSTIQLYREMVDYSRTYENVKTESCIHLLSEAHLLVRAAM
MDPHFLKSDEKEDLLKAFRESCAFLGDCYGRFDTKDYHLALPYYRMSGLSMTEVLKRLVS
EGDEMQTYAKGFIFYLTHSLNEDSNEELSKESGNKVLQIFYLADPVQLPHVLCSPSMRNV
CPLTAVKYLQKVEKMMPSAVLTLTKAFLALKMGDLTMYEHEMDSCKETTLACGFIGQPRL
LHQRKEGIVMPTEFAVHLKEMQPGLLVAATVALYENRKIELEEADTFFKMLCNSSENTIP
QLLVDFWEALLVVSSQEEILQELLLRVTSQYVWRISRKQLPETKPLKTTEDLINSCRHFG
LIVPWVTSVMSVGCSSDKDYHGDISRLQSLLCSQSINIASALPVLEPLTEADNVGLTIRV
LSSTRLGKYEEAIEQLLRRCPDAAVFYAQHELKGDNQALWWKKLLPELCKRTRLTGNDCP
VLISSLKETLSIVAMELELRDFLSVLPEDGTAGFFLPHLLHCSQGKLLT
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagctgtacaatctgcacccgttcgggtcacagcgagtagtgccctgcaagcaa
gaaccgtcgcacttctgctgcggccaagacgtgctgttcgtggccagcacggcggccagc
tgcaaggtggaggtgttcgccgtgcacgaacagggccgctgcgaggccctgggctccttc
gccacgctgggtccggtgctgcgcatggcgcacagctcgacaggagactatctggtgaca
attgaagaaaaaagcaaagcaactttcctaagagcatatatgaactggagatgcatgtct
gcagggagttctcgcgtgtgtgttcggatggttggtcacaagatggaagagtcatacagt
gaaacctttaaagaacagatgtcagttgttgaaatgccactttcagatcctccactgtgc
atttcgtgttgtcctgtgaatggagatcttcttgtgggctgcaagaataaactagtcatg
ttctgtttgaaataccgggtcataaatcagaatttgactgtgttagattttgaacgctcc
ttaattttgcacattaataacctcattcctgctgaagttgcgttttgtgccagacatata
gctgtaacaacagagctggatgttctaatgctgaaactggaactggtccagcagagggca
gacaggacagagcaatgtgctcaggcagtcaatgcaccagaaaaggctgtggatggaggt
gtgaaagatgaaagtacttcaacagatcctttacagcttgaattagatgagttcatcata
tgtcagaaaccagtggaactgcttggggaagaaagtaagctatgtgagatacccatcaca
ctggaatccacagagttacctacagaagacacaaagcacttccaagtgcggtatctgctt
ttcagacgttttgcaccccaccagtcgccttttgggttttgtgaagagacaaagttgcac
tctgttcaactgcttcctgtataccagacaggaatttctacaacagcctatgaggaaact
gagaacaagagaaaacttctgagtctcttctgctttttctctttaccttatgttggatat
ctctactccattggaaagttagtagagctaatttctacttaccaatattcagagaagtca
gagcaggcagtcctcactccacagttcctgcatgtcattacaagtcagagcctgcagtgc
ttcacagtgcgatgcagtgcagcagcagctcgtggtgaggatccctatatcgacacgact
gtgaaggcttgtccacctgtcacactcgatgtctgtacattaagaatgcagctttttata
ggaccaagagctatctgtcatttcaaaaaccatataattcttttgactaaggcagacaca
gaagatattactgaaagaagaaagcctacaagaaggatgctttccagaaagactgacagc
atcaaatccagaacaaattctgagtcagagcctggttggaatttatatattataaacact
gtttcaacaattcagctttacagagaaatggtagattatagtagaacttacgaaaatgtt
aaaactgagagctgcatccatcttctaagtgaggctcacttattggtcagagcagctatg
atggaccctcatttccttaaatcagatgagaaggaagatcttctaaaagcattcagagaa
agttgtgccttcttaggagactgctacggcaggtttgacacaaaggattaccaccttgct
ttgccatactacagaatgtcaggtttatccatgactgaagttttaaagagactagtttca
gaaggtgatgaaatgcagacatacgcgaaaggatttatattttacttaactcattctctt
aatgaagactcaaatgaagaattaagtaaggaatcaggaaataaagttctccagatattc
tatcttgcggaccctgtgcagctgcctcacgtcctttgcagtcccagcatgagaaacgta
tgtcctttgacagctgtgaagtatcttcagaaagtagaaaagatgatgccatcagcagtc
ctgacacttactaaggctttcttggctctgaaaatgggagacctaacaatgtatgaacat
gaaatggactcctgtaaggagacaacactggcttgtggcttcattgggcaaccacgactc
ttgcatcagcgtaaagagggaattgttatgccaactgagtttgctgttcacctgaaggag
atgcagcctggtttgctggtggctgccactgtggctttatatgagaacaggaaaattgaa
ctagaagaagcagatacctttttcaagatgctgtgtaatagtagtgaaaacactattccc
cagctcctggtggatttctgggaagctcttcttgtagtgtcgtctcaggaagaaatactt
caggaactcctattgagggttacttctcagtatgtttggagaatatcaaggaagcagctt
cctgaaactaagccattgaaaacaacagaggatctaataaactcctgtcgtcattttggg
ttgatcgtcccatgggtaacttctgtaatgtcagtgggttgttcatctgacaaagattac
catggagacatctcaagactacagtctcttttatgtagtcagtcaatcaatatagcatca
gctctgcctgttttggagcccctgacagaagctgacaatgttggcctcaccatccgtgtc
ctcagcagtacccgtctgggcaagtatgaggaagccatcgagcagcttctcagaaggtgt
cctgatgcagctgtgttctacgctcagcatgagctgaaaggtgacaatcaggctctctgg
tggaagaagctgcttcctgaactttgcaagagaactagacttactggaaatgactgccct
gttcttatttcatcactcaaagaaactttatcaattgttgcaatggaactggagctaagg
gatttcctaagtgttctaccagaggatgggactgcaggattttttctgccacatcttctt
cactgcagccaggggaagttgctgacctaa
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