Parus major (Great Tit): 107208797
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Entry
107208797 CDS
T04864
Symbol
FXR1
Name
(RefSeq) fragile X mental retardation syndrome-related protein 1 isoform X3
KO
K15516
fragile X mental retardation protein
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmaj03019
]
107208797 (FXR1)
Messenger RNA biogenesis [BR:
pmaj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
107208797 (FXR1)
Factors involved in mRNA localization
Other mRNA localization factors
107208797 (FXR1)
mRNA cycle factors
Stress granule specific factors
107208797 (FXR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
FXR_C1
KH_9
FXR_C3
Tudor_FRX1
KH_1
Agenet
KH_2
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
107208797
NCBI-ProteinID:
XP_015493155
Ensembl:
ENSPMJG00000002237
LinkDB
All DBs
Position
9:complement(17977455..18010709)
Genome browser
AA seq
670 aa
AA seq
DB search
MKSFCFFLEVGFIKDVHEDSLTVVFENNWQPERQVPFNEVRLPPPPDIKKEIGEGDEVEV
YSRANEQEPCGWWLAKVRMMKGEFYVIEYAACDATYNEIVTYERLRPVNQNKTVKKNTFF
KCTVDVPEDLRDACANENAHKDFKKAVGACRIFYHAETAQLIILSASEATVKRVNILSDM
HLRSIRTKLMLMSRNEEATKHLECTKQLAAAFHEEFVVREDLMGLAIGTHGSNIQQARKV
PGVTTIELEEDTGTFRIYGETADAVKKARSYLEFVEDFIQVPRNLVGKVIGKNGKVIQEI
VDKSGVVRVRIEGDNENKLPREDGMVPFVFVGTKESIGNVQVLLEYHIAYLKEVEQLRLE
RLQIDEQLRQIGMGFRPSSTRVPEKEKGYTTDESTLSSVQGSRSYSGRGRGRRGPNYTSG
YGTNSELSNPSETESERKDELSDWSLAGEDDRESRHQRDNRRRPGGRGRSVSGGRGRGGP
RGGKSSISSVLKDPDSNPYSLLDNTESDQTVDTDASESHHSSNRRRRSRRRRTDEDAVLM
DGMTESDTASVNENGLDDSDKKPQRRNRSRRRRFRGQAEDRQPVTVADYISRAESQSRQR
NPPKETVAKTKKETAKDAIDENSPSEKAVNGPATTSGDEPSKLQHSPDEKKVTVQEDGNN
QEEAVLNGVS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctttctgtttttttctggaagttggatttatcaaagatgttcatgaggactcc
ctcacagttgtatttgaaaacaattggcaaccagagcgccaggtgcccttcaatgaagtc
agattaccaccaccccctgatatcaagaaagaaattggtgaaggagatgaggtggaggtt
tattcacgggcaaatgaacaagaaccttgtggctggtggctggcaaaagttcgaatgatg
aaaggagagttttacgtcattgaatatgctgcttgtgatgccacttacaatgaaattgtc
acttatgaacgactccgacctgtgaatcagaacaaaactgtcaaaaagaacaccttcttc
aagtgcacagtggatgttcctgaagacctgagagatgcgtgtgctaatgaaaatgcacat
aaagatttcaagaaagctgtgggagcatgtcgaattttttatcatgctgaaactgctcaa
ctaataatactgtctgccagtgaagcaacagtaaagagagtgaacatcctcagtgacatg
cacctgcgcagcattcgcaccaaactcatgctgatgtcaagaaacgaggaagctacaaaa
cacttggagtgcacaaagcagcttgctgcagcatttcatgaggagtttgtagtcagagaa
gatttaatgggacttgctataggaacacatggcagtaacatacaacaagccagaaaggtt
ccaggagttacaaccattgaacttgaggaggataccggtactttcagaatctatggagag
actgctgatgcagtaaaaaaggccagaagttacttggaatttgtggaggattttattcaa
gttcccagaaatcttgttggaaaagttattggaaaaaatggaaaagtgattcaggagatt
gtagacaagtctggagtcgtcagggtgagaattgaaggagacaatgaaaataagctgccc
cgtgaagatggaatggtaccgtttgtatttgttggtactaaagaaagcattggcaatgtc
caagttctgttggagtatcacatcgcatatctaaaggaggtagaacaactaagactggaa
aggctccaaatcgatgaacagctgcgccagattgggatgggcttcaggccctcctcgact
cgagttcctgagaaggagaagggttacaccaccgacgagagcaccctctcctcagtgcag
ggctccaggtcctacagcgggcggggcagaggccgcaggggccccaattacacatctggt
tatggtacaaactctgagctctctaatccctctgaaacagaatctgagaggaaagatgaa
cttagtgactggtccttggcaggagaagacgacagggagagcaggcaccaacgtgacaac
agacgacgtcctgggggacgagggcgtagcgtgtctggaggtcgtggacgcgggggacct
cgtggtggaaagtcatccattagctctgtgcttaaagacccggacagcaacccttacagc
ttgctggataacacggagtcagaccagaccgtggacacggacgccagcgagtcccaccac
agcagcaaccgccgccggaggtcacgccggcgaaggactgatgaagatgctgttcttatg
gatggaatgacagagtctgatacagcttctgttaatgagaatggtttagatgatagtgac
aaaaaaccccagcgacgcaatcgtagccgcaggcgtcgcttcaggggtcaggcagaagat
agacagccagtaacagtagctgattatatatcacgagctgaatctcaaagtagacagaga
aaccctccaaaggagacagtagccaaaaccaagaaagaaacggcaaaagatgcgattgac
gaaaacagcccatctgaaaaggcagtgaatggtcctgccaccacctctggggatgagcct
tctaaactacagcacagccctgatgaaaagaaagtcactgttcaggaggatggaaataat
caggaagaagcagtgctgaatggtgtttcataa
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