Parus major (Great Tit): 107208850
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Entry
107208850 CDS
T04864
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107208850 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmaj03019
]
107208850 (DHX36)
03012 Translation factors [BR:
pmaj03012
]
107208850 (DHX36)
Enzymes [BR:
pmaj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107208850 (DHX36)
Messenger RNA biogenesis [BR:
pmaj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
107208850 (DHX36)
Translation factors [BR:
pmaj03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
107208850 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
HA2_N
AAA_22
nSTAND3
ATPase
AAA_19
Sir1
NPHP3_N
AAA_23
Motif
Other DBs
NCBI-GeneID:
107208850
NCBI-ProteinID:
XP_015493282
Ensembl:
ENSPMJG00000006774
LinkDB
All DBs
Position
9:24330764..24346241
Genome browser
AA seq
983 aa
AA seq
DB search
MSYEQRRDWGRGRGRGRGGDGGSASAASSSAGGPGGRGRHPGHLKGREIGLWYARKQGQK
SRDADRQQRAVVRMDERREEQIVQLLNSVQTKNDKEQEAMSWWSGDEEGPAPEQPAKVKP
HAVKAPVRQRPAWEKTSLDLDVEYLCEKTEQDADLDEQLKEDLMKKRSDPRYIEMQRFRE
KLPSYGMREELVRLINNNRVTVISGETGCGKTTQVTQFILDDHIERGLGSTCRIVCTQPR
RISAISVAERVAAERAEGCGNGRSTGYQIRLQSRLPRKQGSILYCTTGIVLQWLQSDKHL
SSISHVVLDEIHERNLQSDVLMSIIKDLLNVRLDLKVILMSATLNAEKFSEYFDHCPMIH
IPGFTFPVVEYLLEDVIEKLRYTPEKMDRRTHWRKGFMQGHVSRPEKEEKEEIYRQQWPG
YLRQLQGRYSASTIDALEMMDDDKVDLDLVAALIRHIVLEEEDGAILVFLPGWDNISTLH
EILMSQVMFKSDRFIIIPLHSLMPTVNQTQVFKKTLPGVRKIVIATNIAETSITIDDVVF
VIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDD
YQLPEILRTPLEELCLQIKILKLGGIANFLSKLMDPPSRDAVMLAINHLMELNALDRQEE
LTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARR
KELSKNSKSDHLTVVNAFTGWEEARSCGFRNEKDYCWEYFLSSNTMQMLHNMKGQFAEHL
LAAGFVNSRNPKDPKSNTNSGNEKLLKAVICAGLYPKVAKIRPSFSKKRKMVKVCTKTDG
SVNIHPKSVNVEETEFHYNWLVYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDKDQ
DTIAVDEWIVFQSPEKIANLVKKLRQELDDLLQEKIESPHPVDWNDIKSRDTAVLTAIID
LITTQENEGVRNFAPRFQGERYS
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgagcagcgccgcgactggggccgcggccgcggccggggccggggcggcgat
ggcggctctgcctccgccgcctcctcctcggcgggcgggcccggcgggcggggacggcac
cccgggcacctgaagggccgcgagatcgggctgtggtacgcccgcaagcagggccagaag
agccgggacgccgaccggcagcagagagctgtcgtgcgcatggacgagcgcagggaagag
caaatcgtgcagctgctgaattctgtccagactaaaaacgacaaagagcaagaagccatg
tcctggtggtccggggatgaagaaggccctgctccagaacagcctgccaaagtgaaacca
catgctgtcaaagctcctgtgagacagagaccagcctgggagaaaacatccctggatctg
gatgtggaatatctctgtgaaaaaaccgagcaggatgctgatttagatgagcaacttaaa
gaagacttaatgaagaagagatctgatcccagatacattgaaatgcagaggttcagagag
aagctcccctcatacgggatgagagaggagctggtgaggctgatcaacaacaaccgtgtg
acggtgatcagcggtgagacaggctgtgggaaaaccacacaggtcacccagttcatcctg
gacgatcacatcgagcgtggcctgggctccacctgcaggatcgtgtgcacccagccccgc
aggatcagcgccatctccgtggctgagagagtggctgctgagagggctgagggctgtggc
aatggcaggagcactgggtaccagatccgcctgcagagtcggttgccaaggaaacaaggt
tcaattttgtactgtaccacgggaattgtcctgcagtggctccagtcagataagcacttg
tccagcatcagtcatgtagttcttgatgaaatccatgaaagaaatctccaatcagatgtt
ttaatgagcattattaaagatcttctgaatgttcgactggatctgaaagttatactgatg
agtgctactttaaatgcagagaagttttctgagtactttgaccattgcccaatgattcac
atccctggatttaccttcccagtggtggaatatctgcttgaagatgtcattgagaagttg
aggtacaccccagagaagatggatcgccgcacgcactggaggaagggcttcatgcagggc
cacgtgagcaggccagagaaggaggagaaggaggagatctacaggcagcagtggccaggc
tacctaaggcagctgcagggcaggtattcagcaagtacaattgatgccctggagatgatg
gatgatgacaaggtggacctggaccttgtagcagcactcatcagacacattgtgctggaa
gaggaggatggtgcaattctggtgtttctgcctggctgggataacatcagcactttgcat
gagatcttgatgtctcaagtcatgtttaagtcagataggtttattatcatacctttgcat
tcactgatgcctactgttaaccagactcaggtgttcaagaagaccctgccaggagtgagg
aaaatcgtgattgcaaccaatattgcagagaccagcatcacaatcgatgacgtggtgttt
gtaatagatggggggaagataaaggagactcactttgacacccagaacaacatcagcacc
atggcagcagagtgggtcagcaaagccaatgccaagcagaggaagggtcgagcaggaaga
gttcagccaggccactgttaccacttgtacaacggactgcgtgccagcctcctggatgat
tatcagctacctgagatcctgaggacacccttggaagagctctgcttacagatcaagatc
ctgaagcttggtggaattgccaattttctgagcaaactgatggaccccccatctcgtgat
gctgtgatgttggccataaatcacctcatggagctgaatgctctggacaggcaggaggag
ctgactcccctgggtgtccacctggcacggctgcctgtggagccacacatcgggaagatg
atcctgtttggagccttgttctgctgcctggaccccgtgctgaccattgcagccagcctc
agcttcaaggacccttttgtcatccctctgggcaaagagaaaatcgcagatgcaagaaga
aaagagctgtcaaagaactcaaagagcgaccatctgactgtggtgaatgctttcactggc
tgggaagaggctcggagttgtggcttcaggaatgagaaggactattgctgggaatatttc
ctgtcctcaaataccatgcagatgctgcataacatgaaaggacagtttgctgagcatctc
cttgcagctgggtttgtcaatagcagaaaccccaaggatcccaaatctaacaccaactca
ggtaatgagaagctgctcaaagcagtcatctgtgctggcctctatcccaaagtggcaaag
atccggcccagcttcagcaaaaagagaaaaatggtgaaagtttgcaccaagacagatgga
tcagttaatatccatcccaaatctgtgaacgtggaggaaaccgagttccattacaactgg
ctcgtgtaccatttgaagatgaggaccagcagtatttacctgtatgactgtacagaggtg
tctccatactgcctcttgttctttggaggggatatatccattcagaaggataaggaccag
gacaccatcgctgtggatgagtggattgtgttccagtctccagaaaaaatagcaaacttg
gtcaagaaattgagacaagaacttgatgatcttctacaagaaaaaatagaaagcccccat
cccgtggactggaatgatattaaaagcagggatacagcagtgctgacagctattatagac
ttaatcaccacgcaggagaacgagggcgtcaggaacttcgcgccgcggttccagggcgag
cgctacagctga
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