Parus major (Great Tit): 107208895
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Entry
107208895 CDS
T04864
Symbol
U2AF1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit isoform X3
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107208895 (U2AF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmaj03041
]
107208895 (U2AF1)
Spliceosome [BR:
pmaj03041
]
Complex A
U2 snRNP components
U2 related factors
107208895 (U2AF1)
Complex B
107208895 (U2AF1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
107208895
NCBI-ProteinID:
XP_015493441
Ensembl:
ENSPMJG00000010719
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All DBs
Position
1:complement(5061690..5078302)
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AA seq
237 aa
AA seq
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MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQ
SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE
EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKKHRSRSRSRERRSRSRDRGRGGGGGGGGGRERDRRRSRDRERSGRF
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtacctggcctccatcttcggcaccgagaaggacaaagtcaactgctcattt
tatttcaaaattggagcatgtcgccatggagacagatgttctcggttgcacaacaaacca
acatttagccagaccattgccctcttgaacatttaccgtaaccctcaaaactcttcccag
tctgctgacggtttgcgctgtgctgtgagcgatgttgagatgcaggaacattatgatgag
ttctttgaggaggtcttcacagaaatggaggagaaatacggcgaagtcgaggagatgaac
gtttgtgataaccttggagatcatttagttggaaatgtatatgtaaagttccgccgtgaa
gaagatgcagaaaaggcggtgatcgacctgaacaatcgctggtttaatgggcagcccatc
catgccgagctctcccctgtgactgacttcagagaggcctgttgccgtcaatacgagatg
ggagagtgtacacgaggaggtttctgcaactttatgcatttgaagcccatttctcgagag
ttaaggcgcgagttgtatggccggcgtcgtaaaaagcatagatccaggtcgaggtcccgt
gaacgccggtctagatccagagatcgcggccgtggcggtggaggaggaggaggaggaggc
cgcgagcgtgacaggaggcggtcaagagatcgtgaacgatccggtcgattctga
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