Parus major (Great Tit): 107208934
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Entry
107208934 CDS
T04864
Symbol
SNED1
Name
(RefSeq) sushi, nidogen and EGF-like domain-containing protein 1 isoform X1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pmaj04990
]
107208934 (SNED1)
Domain-containing proteins not elsewhere classified [BR:
pmaj04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
107208934 (SNED1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
NIDO
hEGF
EGF_TEN
fn3
EGF_2
EGF_CA
Fn3_Dep-1_4th
Ig_DSCAM-DSCAML_C
EGF_3
EGF_Teneurin
cEGF
CzcE
Motif
Other DBs
NCBI-GeneID:
107208934
NCBI-ProteinID:
XP_015493576
Ensembl:
ENSPMJG00000013496
LinkDB
All DBs
Position
9:complement(107379..128115)
Genome browser
AA seq
1444 aa
AA seq
DB search
MQVLAGWAVLVALGEWLWAGGEVPLGDFYPFGPAQGDAATRKQDDGGSELRPLSIPFPFF
GAGHTGLYVNNNGIISFLKEVSQFTPVAFPISKDRRVVAAFWADVDNRRAGEIYYRESTE
QPILERASRDIAQYFPEFPGFSAQWVFIATWYRVTFFGGSSFSPVNTFQIVLITDGKLSF
TIFNYESITWTTGMHASSGGDFAGLGGIAAQAGFNAGDGKRYFNIPGSRTDDIADVEMTT
NVGIPGRWVFRIDDAQVQVGGCSNTTSVCLTLRPCLNGGKCIEDCITGNPSYTCSCLAGF
TGKRCHVDVDECLSHPCQNGATCLNGASRFTCRCPPGFRGSNCEIAESPCENRVCQNGGS
CQVVNRTAACLCQSGYTGVDCQTEVNECESSPCLNGGHCIDLVDNYTCVCLEPFEGQRCE
TDSSSCEDRNCQNRQTCNYIRPGRYICTCSPGYYGNNCQYGGPRVPGACLSHPCQNAGIC
LETERGYVCECQEGYTGQDCQDQLSEGCECRNGGSCLEGNVTVCQCLPGFFGLLCEFEVT
TTPCNMNTQCPDGGYCMEYGGSYLCVCHTNYGTNHTMPSPCDSEPCLNGGSCKVHDDSYV
CECPQGFLGMHCEKAKPRLCSTGPCRNGGTCREADGEYHCTCPYRFTGKHCEIGKPDPCA
SGPCQNGGTCFHYIGKYKCDCPPGYTGRHCEIVPSPCFLSPCENGATCEDLSGGYACTCS
SGYVGKHCQFEVDCGIPSEVKHAQASFNSTKVGSLAEYQCELGYILSQHNHPRVCRVPGV
WSDPPECDEIDECQSQPCLNGGQCKDRVSAFLCLCEPGYTGYHCELDVDECQSEPCKNSG
TCQDLPGSFACYCPEGFLGTQCETEVDACESDPCRNGGECESYGGSYLCVCPEGFFGYHC
ETASDPCFSSPCGSRGYCLPSNGTHSCTCKVSYTGKNCEKELLPPTSLKVERVEDTGVLI
SWHPPEDAAARQLIDGYAVTYVSLDGSYRRTDFVDRSRSAHQLRALTSGRAYNISVFSVK
RNVNNKNDISRPVMLTTRTRPRPVEGFEITNVTASAITVQWALHQLQHSTVSRVRVSIRQ
MGDLAGRTVELNSSVAKYTFLDLQPGERYIIHVTTLSGLGVEDHPSESLATAPFHVWTRP
LPPQNLTASRVTATSVSMAWEQPPIGTMEGYIINVTTAQSVKSRYVPNGKLVSYTVRDLL
PGQRYQLSLTAVQNTEQGQVHSEPIHLYISTLQRDGAPDRRWSQAGHPRVLRNRLPPAFL
PELRLLADHDTAEEPSPAPRFTELVDGRGRISARFGTAPGKSLTVKTQTEAPVKLENTEV
SSWDSLALQLHEAKSKREGQSCSKNPCRNGGTCTRDDESFHCACRPGFKGRVCQLACKKV
PHSCTRLYSETRSFPVWEGGTCHYLFRRVYKVHQDICYKESCESTSSKRTSSRKPSNSHT
LKKP
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtcctggcaggctgggccgtgctggtggcactaggcgagtggctgtgggccggt
ggggaggtgccgctgggggacttctaccccttcgggccggcccagggcgacgccgccacg
cggaagcaggacgacggtggctccgagctccggcccctctccatccccttccccttcttt
ggtgcggggcacaccggcctctatgtaaacaacaatgggattatctcgttcctgaaggag
gtctcccagttcacgccagtggccttccccatctccaaggaccggcgcgtggttgctgct
ttctgggcagatgtggataatcggagggcaggcgaaatatattaccgagagagtaccgag
cagcccatcttggagagagcaagcagggacattgcccagtatttccctgagttcccaggg
ttttctgcacagtgggtcttcattgcaacctggtaccgtgtcaccttcttcgggggcagc
tcattttcaccagtaaacacattccagattgtcctcatcacggatggcaagctttccttc
accatctttaactatgagtccatcacctggaccacgggtatgcacgccagcagtgggggg
gactttgctgggctcggtggcatcgcggcacaggcaggttttaacgctggtgatggaaag
cgctacttcaacatccccggatcccgcaccgatgacatcgctgacgtggagatgacgaca
aatgtgggtatccccgggcgctgggtgttcagaatcgatgatgcccaggtgcaagtgggg
ggctgcagcaatacaacctctgtctgcctgacactgcggccctgcctgaacggggggaag
tgtattgaggactgcattacggggaacccctcctacacctgctcctgcctggccggtttt
actgggaagaggtgccatgttgatgtggatgagtgcctctcccacccatgtcagaatgga
gccacctgcctcaatggtgccagcaggttcacctgcagatgcccaccaggcttcagaggc
agcaactgtgagattgcagaatcaccatgtgagaacagggtgtgccagaatggtgggagt
tgccaggtggtgaacaggacagcagcatgcttgtgccagtcagggtacacaggggtggac
tgccaaacagaggtgaacgaatgtgagtccagcccatgcctgaatggcgggcactgcatt
gacctggtcgataactacacctgtgtgtgcctggagccctttgagggacagcgctgtgag
acagattcatcttcctgtgaggaccggaattgccagaaccggcagacgtgcaactacatc
cgccctggccgctatatctgcacctgctccccgggttattatggcaacaactgccagtac
ggtgggccccgtgtgcccggcgcctgcctctcccacccgtgccagaacgcaggcatctgt
ctggagactgagcggggctatgtctgtgagtgccaggagggctacactggacaggactgt
caagaccagctctctgaaggctgtgagtgtcgtaatgggggaagttgtctggaggggaat
gttactgtctgccagtgccttcctgggttctttggtctcctctgtgaatttgaagtcacc
acgacaccgtgcaacatgaacacgcagtgcccggacggtgggtactgcatggagtatggc
gggagctacctctgtgtctgccacaccaactacggcaccaaccacacgatgccatccccc
tgcgactcggagccctgcttgaatggggggtcctgcaaggttcacgatgactcgtacgtc
tgcgagtgtcctcaaggcttccttggcatgcactgcgagaaagccaagcctcggctctgc
agcactgggccctgccgcaacgggggcacctgcagggaggcggatggcgagtaccactgc
acctgcccctaccgcttcaccggcaagcactgcgagatcggtaagccggacccctgtgcc
tcggggccctgccagaatggaggcacctgtttccactacatcggcaagtacaagtgtgac
tgtcctccaggctacactggccggcactgcgagattgtgccctccccttgctttcttagc
ccctgtgagaatggggctacctgcgaggacctcagcgggggctatgcttgcacctgctcc
tcgggctatgtagggaagcactgccagtttgaggtcgactgtggcatccccagtgaggtg
aagcatgcgcaggcttctttcaactccaccaaggtgggctcactggctgaataccagtgt
gaactgggctacatcctcagccagcacaaccatccccgtgtctgccgcgtgccaggtgtc
tggagtgacccccccgaatgtgatgagattgatgagtgccagtcgcagccctgcctgaat
ggtggccagtgcaaggatcgtgtctctgccttcctgtgcttgtgtgagccaggttacacc
ggctaccactgcgagttggatgttgacgagtgccagtcagagccctgcaagaacagcggg
acctgccaagacctccccgggtcctttgcttgctactgtcccgagggcttcctggggacc
cagtgtgagacagaagtggatgcctgcgagtcagacccttgccgaaatggaggggagtgt
gagagctacgggggctcctacctctgtgtgtgcccagagggtttcttcggctaccactgt
gagacagccagtgacccgtgcttctccagcccctgtgggagcagaggctactgcctgccc
agcaatggcacccacagctgcacctgcaaagtcagctacacaggcaagaactgcgaaaaa
gaattgctgccaccaacctcattaaaggtggaaagggtggaggacactggtgtgttgatt
tcttggcacccacctgaggacgcagctgccaggcaactcattgacggctacgccgtgacg
tacgtatccctcgacggctcttaccgcaggacagattttgtggaccgaagtcgttctgcc
caccaattgcgggcactaacctccggcagagcctacaatatttctgtcttttcagtcaaa
cgcaacgtgaacaacaagaatgatatcagcaggcccgtcatgctcaccacgcgcactaga
ccgcgtccggtggaaggctttgagatcacaaatgtgactgccagtgccatcacggtgcaa
tgggctctccaccagctccagcattccactgtcagtagggtgagggtctccatccgccag
atgggggacctggcaggccgcaccgtggagctgaacagcagcgtggccaagtacaccttc
ctggacctgcagccaggagagagatatatcatccatgtcacaacgctgagcggcctggga
gtggaagaccacccctcagagagcctggccacagccccttttcatgtgtggacaaggcct
ctccccccacaaaacctcactgcctcccgtgtcaccgccacctctgtgtccatggcgtgg
gagcagccgcccattggcactatggaggggtacatcatcaatgtcaccactgctcagagc
gtcaagagccgctacgtgcctaacgggaaactcgtgtcctacacggtgcgggacctgctg
cctgggcagcggtaccagctgtccttgacagctgtgcagaacacagagcaaggccaggtg
cacagcgagcccatccacctctacatcagcaccttgcagagggatggggctccagacaga
cggtggagccaagctgggcacccccgggttcttcgaaacaggctgcccccagctttcctg
cctgagctccgcctgctggcagatcatgacacagctgaggagccctcgccagcccccagg
ttcacagagctggtggatggcagagggaggatcagcgccaggtttggcactgcacctgga
aaatccctcactgtgaagacacagacagaggctccagtgaagctggagaacacagaggtg
tccagctgggacagtctggcactgcagctgcatgaggcaaagagcaagagagaggggcag
agctgctccaagaacccctgcaggaatggaggcacctgtaccagagatgacgagtccttc
cactgtgcctgtcgcccggggttcaagggccgggtctgccagctggcctgcaagaaggtg
ccacactcgtgcacacggctgtactcggaaaccaggtcattcccagtgtgggaaggaggc
acctgccactatctgttcaggagagtatacaaggtacaccaggacatctgctacaaggag
agctgtgagagcaccagttccaagaggacgagcagcagaaagccaagcaacagtcacaca
ctgaagaagccatag
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