Parus major (Great Tit): 107209124
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Entry
107209124 CDS
T04864
Symbol
MEX3B
Name
(RefSeq) RNA-binding protein MEX3B
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmaj03019
]
107209124 (MEX3B)
04121 Ubiquitin system [BR:
pmaj04121
]
107209124 (MEX3B)
Enzymes [BR:
pmaj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107209124 (MEX3B)
Messenger RNA biogenesis [BR:
pmaj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
107209124 (MEX3B)
Ubiquitin system [BR:
pmaj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107209124 (MEX3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
KH-I_KHDC4-BBP
KH_KhpA-B
KH_2
KH_KHD4_2nd
KH_DEAH11_2nd
KH_PNO1_2nd
Motif
Other DBs
NCBI-GeneID:
107209124
NCBI-ProteinID:
XP_015493894
LinkDB
All DBs
Position
10:11200255..11203888
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AA seq
377 aa
AA seq
DB search
MPSSLFADMERNGSGGGGGGGGGGGGETLDDQRALQIALDQLSLLGLDNDETGSIYDNEP
RKKSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPLFVVTGRKED
VAMARREIISAAEHFSMIRASRNKNTALNGTVPGPPNLPGQTTIQVRVPYRVVGLVVGPK
GATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEIEAHIAMRTGGIIELTDEN
DFHANGTDVGFELNGTGSLWSKPTPPSITPTPGRKPFCNYRNDSSSSLGSASTDSYFGGG
TGGGGSARLADYSPPSPALSFSHNGNNNNNSANGYVYGGGGGDVLSSPDCCSELPFDSPP
GFDLAPAPPPGAGKKFL
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgcccagctcgctttttgcagacatggagaggaacgggagcggcggcggcggcggtggt
ggtggtggtggcgggggagagaccctggatgaccaaagagcccttcagatcgccctggat
cagctctccctgctggggctggacaacgacgagacgggctccatttacgacaacgagcct
cggaaaaagagcgtgaacatgactgaatgcgtcccggtgcccagctcggaacatgtcgct
gagatagtggggagacaaggttgtaaaatcaaagctctgcgggcaaagaccaacacctac
atcaagaccccggttcgcggggaggagccgctctttgttgtgacgggcagaaaggaagat
gtggccatggcccgcagggagatcatctctgcggccgagcacttctccatgatccgagcc
tcgcggaacaagaacacagccctgaacggcaccgttcccggtcccccgaacctgcccggc
caaaccaccatccaggtgcgggtgccttatcgcgtggtgggcttggtcgtggggcccaag
ggggccaccatcaagcgcatccagcagcagacgcacacgtacatcgtgaccccgagccgg
gacaaggagccggtctttgaggtaacgggcatgccggagaacgtggaccgggcccgggag
gagatcgaggctcacattgccatgcgcaccggcggcatcatcgagctgacggacgagaac
gacttccacgccaacggcacggacgtgggcttcgagctgaacggcacgggcagcctctgg
agcaagcccacgccgcccagcatcacacccaccccgggccgcaagcccttctgcaactac
cgcaacgacagctccagctcgctgggcagcgcctccaccgactcctacttcgggggcggc
accggggggggcggcagcgcccgcctggccgactacagccccccgagcccggcgctgagc
ttctcgcacaacggcaacaacaacaacaacagcgccaacggctacgtgtacggcgggggc
ggcggcgacgtcctctcctccccggactgctgctccgagctgcccttcgactcgccgccc
ggcttcgacctggcgcccgccccgccgcccggggccggcaagaagttcctgtga
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