Parus major (Great Tit): 107209144
Help
Entry
107209144 CDS
T04864
Symbol
NUP58
Name
(RefSeq) nucleoporin p58/p45 isoform X1
KO
K14307
nucleoporin p58/p45
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107209144 (NUP58)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmaj03019
]
107209144 (NUP58)
Messenger RNA biogenesis [BR:
pmaj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107209144 (NUP58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
Tox-ODYAM1
FapA
NET2A_C
Nup49_C
Mitofilin
PSY3
ASNSD1-SEP
GAIN_ADGRA3
Motif
Other DBs
NCBI-GeneID:
107209144
NCBI-ProteinID:
XP_015493917
Ensembl:
ENSPMJG00000017496
LinkDB
All DBs
Position
1:complement(69430613..69465167)
Genome browser
AA seq
600 aa
AA seq
DB search
MSAGFSFGAGTLGSTAAAGAGGGGAVGSFSFGTATPSSTGGLSFGTLGSSTATATTSAPS
LGFGSGLFGSKSTTGFTLGSTSTAGTATTIATGLTLGTPATTSAATTGFSLGFNKPAGSA
TPFALPVTSTSAGSLSLSSALTATPAAGTTGFTLNLGGTSAPTTTASTGLSLGGALAGLG
GSLFQNTSTATTGLGQNALGLSLGTTAAPSTTANEGLGGIDFSSSSDKKSDKTGTRPEDS
KALKDENLPPVICQDVENLQKFVKEQKQVQEEISRMSSKAMLKVQEDIKALKQLLSVVAS
GLQRNILNIDKLKVETAQELKNAEIALRTQKTPPGLQHENTAPADYFRILVEQFEVQLQQ
YRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVALAAQLQSIHENVKILKDQYLG
YRKSFLGDAMDVFEARRTEAKKWQSAPRVTTGPTPFSNIPNAAAVAMAATLTQQQQPATG
PQPSLGVSFGTPFGSGIGTGLQSSGLGSSSLGGFGSSSAFGSSATGASSFGFGTTSKPSG
SLSAGFGSSTTSGFNFSNPGITASAGLTFGVSNPASAGFGTGGQLLQLKKPPAGNKRGKR
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgggcttctcctttggcgcgggcaccctgggctccacggcggccgccggggca
ggaggaggaggagcagtcgggagtttttccttcggaaccgccacgccgagttcaacagga
ggacttagttttggaactctgggctcttccactgctacagcaaccacatcggctccttca
ttgggctttgggagtggactgtttggatcaaaatcaaccactggctttaccctaggaagc
accagtacagcaggaacagcaacgactattgctacaggactgacattaggcacacctgcc
accacatcagcagctaccacaggctttagtttaggtttcaacaaacctgcaggttcagcc
acgccatttgctttacctgttacttctacctcagcgggcagcctgtcattatcatctgct
cttacagcaactcctgcagcaggaactactggctttacattaaatttgggtggtacaagt
gctccaactacaactgcttccacgggcctttccttaggaggagctttagcaggcttagga
ggttcactcttccagaatacaagcacagcaacaacaggactggggcagaatgctttgggt
ttgtctctggggacaactgcagctccttcaactactgccaatgaaggtcttggtggcatt
gattttagtagttcttctgacaagaagagtgacaaaacaggaacaagaccagaagatagc
aaagcactgaaggatgaaaatctacctccagtaatatgtcaagatgtagaaaatctacag
aaatttgtgaaagaacaaaaacaagttcaggaagaaattagtaggatgtcctctaaagca
atgctgaaagtacaagaagacattaaagctttgaaacagcttctctctgtagttgccagt
ggattacagagaaacattcttaatattgacaagctaaaagttgaaactgcacaggagcta
aagaatgcagaaatagcattacgaacacagaagactcctcctgggcttcagcacgaaaat
acagccccagcagactacttcagaatcttggtcgaacagtttgaagtacagctgcagcag
tacaggcaacaaattgaagaactggaaaatcatcttgctactcaagcaaataattcacac
ataactccacaagatttgtctatggctatgcagaaaatctatcaaacatttgtagcttta
gctgcacaacttcagtcaatacatgaaaatgtaaagatactcaaagaccaataccttggc
tacaggaaaagctttctgggagatgccatggatgtatttgaggcaagacgaacagaagct
aagaagtggcaaagcgcgccacgcgttaccactggaccgacccctttcagcaacatacca
aatgcagcagccgttgcaatggctgcaacacttactcagcagcaacagcctgctacaggg
ccacagccatctctgggagttagttttggaacgccattcggctcaggtattggcactggc
ttgcaatcaagtggcttaggttcttcaagccttggaggatttggaagtagctctgccttt
ggaagtagtgccacaggagcgtcatcatttgggtttggaactacaagtaaaccatcagga
agtctaagtgcaggctttgggagctcgactacgtctgggtttaacttcagcaatcctggc
atcacagcatcagctggcctgacgttcggggtgtctaatcctgcatctgcaggctttggg
acaggagggcaacttcttcagctgaagaaacctccagctggaaacaagcgagggaaaaga
tag
DBGET
integrated database retrieval system
