Parus major (Great Tit): 107209264
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Entry
107209264 CDS
T04864
Symbol
TP53BP1
Name
(RefSeq) TP53-binding protein 1 isoform X1
KO
K20915
tumor suppressor p53-binding protein 1
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
107209264 (TP53BP1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
53-BP1_Tudor
BRCT_3
Tudor_5
BRCT_2
BRCT
RTT107_BRCT_5
DUF4537
SH3_Hsr9
Motif
Other DBs
NCBI-GeneID:
107209264
NCBI-ProteinID:
XP_015494173
Ensembl:
ENSPMJG00000012038
LinkDB
All DBs
Position
10:20102389..20128963
Genome browser
AA seq
1911 aa
AA seq
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MERGGSSQLDPGFSQQDTPLLIVEDSQPQGAEADVERVWLNVLARRLPARRSPSPVLDIV
CGPAGSRAPRERLAGKGGARGHGGSGYRGRADGAVVAEPMDSPARPSPSGPRGCVVEESP
PPDGESSALGKAGERNEGDVEDCASSLCVEDAGMSQLQFGVLELSQSQDFESDFVPGERD
AKYQLHSGPAVLSSRLVRNESKYELCGVNTESDSSTEAHTALESQAEKSQRTLQEAEEHT
RKKMPVSDASKTEESLVSGHDESDILSTQEEMFPDNHAAATAGSGCPIIRVEEGSSLACT
PACSLQVLQLSGQTLVVQEGHSIVSSDLVIPPPVSFGPNALVPSSPTEQEQAKDEQMDIS
IPAEGRELMKKQRGDIVVEMALPCIPPRPLVQPQASTPVSQSAPNFFPGSLPIPSQPEFS
HDIFVPTQSPEKKHEGEEKTSLKTALTPLCLPRSTDALSMMSADDSVSQPPESCELMLSA
SACSQPTATDNSSGSLNTRQGNENTQVERISECKASDSRLCSVENDKIKLNVGDQAPSEN
GEETKKEDIGTACEMPVGQFASAGVAGDGPLAPTVHQEIKCISGSQAAADQSGLPEILSY
AQETSKPEAVPETQCEEEEEKLQVKEKQIKDYRSPGNIKLSHKFILEREGQCHEDTEVND
TCKNSKNVVQELEKSGPECQGKEALKGCTLDAGKVKNVDKLSSEAVAGNVAKLNEVLAKP
SVGELLEQHNLFPKLKSDVQSEPALCDKNHPDRSELGQVMIISNRPSLQERGVETWVVQH
ENQVLKNMEDTVRTRNLEQEEQMQPQEKATSKSPSPSSGTPFCFTLLKEGDVIQSLTSIT
PPLTGHLKMGPRRHSTPIVDDTCPDSTIATSDVTAEGTMGTNNVTVESVVVSADVSEVCE
KGESGVVPESDAKLSLRMNPVTPVNDGSEESLPFSLEKPAASDRKDGSSAAAEAAASSQK
ASSVFSHVCEVHREDETRGHGLSTSSFRGDLYIFPGTQEDAELRTNPSDSQQQKADGSGG
QILIPQRMQQDCHQRSSCAEDGESLEIDVVSTQAEDGRRMQRKQSKAIKIDQSQERWKNI
KNKGIQTTEGCLFTPTTVTTSTQTSEEICRQVEMGTSMSGQRPGQQDVNIQTDESGEKLV
NTSGDDTDSLHCQGEEEFNLLHPPKGRVQHRHMRTIREVRTVVTRVITDVYYINGAEVER
KVVEETEEPVVECQECETDMSSRTAGGSSLTSGDLGDVSSFSSKASSLHRTSSGGSSGHS
ATHSSSSSGRGTGAVKGKVCGTESREFALPIGRGILGKLSPRKGAGQPASPLRVSQTGAL
LCEEEEDCMPGTHQGGRAPVTLRGRGRRGRPPSRATGTRDLAGLPGLEDLSTTASPEEKS
FARSVRLPDGGEKSDTSRFCALRRSDSPEIPLQGATAPSDCADSSTGSSFVGLRVVAKWS
SNGYFYSGMITRDVGAGKYKLLFDDGYECDVLGKDILVCDPIPLETEVTALSEDEYFSAG
VVKGHRKESGELYYCIEKEGQRKWYKRMAVILSLEQGNKLREQFGLGPYEPVTPLTKAAD
ISLDNLVEGKRKRRSNLGSPSTSSSSTTPTRKGQESPRVPAASLSGKRKLIASEDERSPA
KRGRKSAVIKPGALRGGEFVSTCEGVDSADPPVLEGNHGPLPHNKTLFLGYAFLLTMATP
SDKLANHQKPSDGPTGSSEEEEDFLEMTPYDKHYIAKQLRAGAGYILEDFNETQCNAAYQ
CLLIADQHCRTRKYLLCLARGIPCVSHIWVHDSCHANQLQNYRNYLLPAGYSLQEQKLLE
WHPRENPFHNLKVLLVSDQQENFLDLWSEILMTGGAASVKQHYSSAHNKDLALGVYDVVV
TDFSCPAGILKCAEALRLPVVSQEWVIQSLIAGERVGYKQHPKYKHDYVSH
NT seq
5736 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcggcgggagcagccagctggaccccggcttctcgcagcaggacacacccctc
ctcatcgtggaggactcgcagccccagggcgcggaggcagacgtggagcgggtttggctc
aacgttttggctcgccggctgccggcccggcggagcccgagccccgtgctggacatcgtc
tgcggtcctgctgggagccgggcgccgcgggagcgactcgcaggtaagggcggggcgcgt
ggtcacggcgggtccgggtaccgcggtcgcgctgacggcgctgtcgttgcagagcccatg
gacagcccggcccgcccgagcccctctggaccgcggggctgcgtcgtggaggagtctcca
ccgcccgacggggagagcagtgcccttggaaaggccggggaacgaaatgaaggcgatgtt
gaggactgtgcctcttcgctgtgcgtagaagatgcaggcatgtcacagctgcagtttgga
gttctagagctgtcgcagagccaggactttgagagtgactttgtgcccggtgagagagat
gctaagtatcagcttcactctggacctgctgttctttcttccagacttgtgaggaatgag
tctaaatatgaactttgtggggtcaatacagaaagtgactccagcacagaagcacatact
gctttggaaagccaggcagagaagtctcaaagaactctgcaggaggcagaagaacatacc
agaaagaaaatgccagtcagtgatgccagtaaaactgaggaatcccttgtttctggtcat
gatgagtcagatatcttgtcaactcaggaagagatgtttcccgataatcatgcagcagcc
actgcagggagtggctgcccaataatcagggtggaggagggaagttctctggcctgcacc
cctgcctgcagtctgcaagtcctgcagctctctggacagacattggttgtacaggagggt
cattccattgtctcttcagacctagttattcctcctcctgtttcctttggacccaatgcc
cttgtccccagcagtcctactgagcaggagcaagcaaaagatgaacagatggatatatct
atccctgcagaaggaagagaactgatgaaaaagcagagaggagatatagtggtggagatg
gccctcccttgtatccctccaagacctcttgttcagccacaggcttcaactccagtgtcc
cagagtgccccaaacttctttcctggatctttacctataccatcacaaccagagttctct
catgatatctttgttccaactcagagtccagagaagaagcatgaaggagaggaaaaaact
tctttaaaaactgctttaacccctttatgcttaccaagatccacagatgctttgtcaatg
atgtctgctgatgactctgtgtcacagcctccagagtcatgtgaactgatgctttctgca
agtgcatgtagccagcccacagctacagacaacagttcaggctctctgaacacgcgccaa
ggcaatgagaacacacaagtagagagaatttctgaatgcaaggcctcagactcaagactc
tgttctgtggagaatgataaaataaaactgaatgtaggtgatcaagcaccctctgaaaat
ggtgaagaaacaaaaaaggaggacatagggactgcatgtgaaatgcctgtaggacagttt
gctagtgcaggtgttgcaggagatgggccattagcccctacagttcatcaggagatcaag
tgtatttctggaagtcaggctgctgcagatcagtctggtctgcctgagattttgtcatat
gctcaagagacttccaaacctgaggcagttcctgagactcagtgtgaagaagaagaagaa
aaactgcaagtaaaagagaagcaaataaaggattataggtctcctggtaatataaaactt
tctcacaagtttattcttgaaagggaaggacagtgtcatgaagatacagaagtgaatgat
acttgtaaaaatagcaaaaatgtagtccaggaattagaaaagagtgggccagaatgtcag
ggaaaagaagctttgaaaggttgtactttggatgctgggaaggtgaagaacgtggataaa
ctatcttctgaggctgtagcaggaaatgtggcaaagctcaatgaagttttagctaagcct
tctgtaggggagttattggagcagcacaatttgtttccaaagttaaagagtgatgtccag
tcagaaccggcattgtgtgacaaaaaccatcccgatcgttcagaattgggacaggtaatg
ataataagtaatcgaccatcacttcaagagagaggggttgaaacatgggtggttcagcac
gagaatcaggtgctaaagaatatggaggatactgttaggacaaggaatctggagcaagaa
gagcaaatgcagccacaggagaaggcaacttctaaatcccccagtccttccagtggaacc
ccgttttgttttactttgctgaaggagggtgatgtcattcagtccttaactagcataaca
ccacctcttactggccatctcaaaatgggacccaggagacacagcacaccaattgtggat
gatacttgcccagacagcactatagcaaccagtgatgttacagcagagggcacaatgggg
accaacaatgtcactgtggaaagcgtggtggtatcagcagatgtgtcagaagtgtgtgag
aaaggagagtctggtgtggttcctgagtcagatgcaaaactttctctgcgaatgaaccct
gttacccctgtgaatgatggcagcgaggagtccttgccattcagcttggaaaagcctgca
gccagtgacaggaaagatggatcctctgctgctgctgaggctgctgccagctcccagaaa
gcatcatctgtgtttagtcatgtctgtgaagttcatcgagaggatgagaccagaggtcat
ggtctttccacttcttcatttaggggggatctgtacatttttcctggcacacaggaagat
gctgaattacgtacaaatcccagtgattcccagcaacagaaggcagatggcagtggtgga
cagatcctaattcctcagaggatgcagcaggactgccaccagcgatcttcttgtgcagag
gatggagagtctctggagattgatgttgtaagcactcaagcagaagatgggagaagaatg
cagagaaaacaaagtaaggctattaaaattgatcaaagtcaagagaggtggaaaaacatc
aagaataaagggatccagactacagaaggttgtctttttaccccaacaactgttacaacg
tcaacacaaacatcagaagaaatctgtagacaggtggaaatgggaaccagtatgtctggg
caaagacctgggcaacaagatgtgaacattcaaaccgatgagagtggggaaaagcttgtc
aacacctctggagatgacacagactctttgcactgtcagggagaggaggagtttaacctt
cttcacccacccaaaggccgagttcagcatcgccacatgcgaaccattcgagaagtgcgc
actgttgttacccgtgttataacagatgtttactacatcaatggtgcagaggtggaacga
aaggtagttgaggaaactgaggagcctgtagtggagtgccaggaatgtgagactgacatg
tcctctagaactgcaggaggctcatcgctgacctcaggggaccttggtgatgtcagctcc
ttctcatctaaggcctcaagtctccaccgtacatccagtggaggaagcagtggtcactct
gccacacacagcagcagcagctcagggcgaggaactggagctgtcaaagggaaagtgtgt
gggacagaaagcagagaatttgctttacccattggcagaggcatcttaggaaaattgagc
cctaggaaaggagctgggcagcctgcatcaccactcagagttagccagacaggagcactg
ctttgtgaggaagaggaggactgtatgcctggcactcatcagggtggcagagcacctgtg
acacttcgtggacgaggaagaagaggacgcccaccatctcgagcgacaggaacaagagat
ttagctggactgccaggtctggaggatctttcaactaccgcatcacctgaggagaaatca
tttgctcgttcagttcgactgccagatggaggagaaaaatctgacacttctcgcttctgt
gccttacgtcgaagtgactctccagaaatcccattacaaggggcgactgctccttcagac
tgtgcagactcatccactgggagcagctttgtgggcctcagggttgtagcaaagtggtcc
tcaaatgggtacttttattctgggatgattacccgagatgttggagctggaaagtacaag
ctactctttgatgatggatatgaatgtgatgtgctaggaaaagatattttggtctgtgat
cctatcccactggagacagaggtaactgcactctctgaagacgagtacttcagtgcaggt
gtggtgaagggacaccggaaggagtctggggagctatactattgcattgaaaaggaaggc
cagaggaagtggtacaaacgaatggctgttatcctgtctctggaacaaggaaataagctc
cgggagcagttcgggctaggtccttatgaacctgtcacccccctgaccaaagcagctgac
atcagccttgataatctggtggaggggaagaggaagcgacgtagtaaccttggttctccc
agcacttccagcagcagcacaactcctactcgtaaagggcaggagagtccacgtgtccca
gcagcctccctgtctgggaaaaggaaacttatcgcttccgaagatgagcgatccccagct
aaacgtggccgcaagtcagcagtaataaagcctggggctctgaggggtggagagtttgta
agcacctgtgaaggtgtagattctgcagatcccccagtactggagggcaaccatggaccc
ttaccccacaataagaccctctttttgggctatgcctttcttctcaccatggcaacacca
agtgacaaattggccaatcaccagaagccatcagatggtcccactgggagcagtgaggag
gaagaagattttttagagatgactccatatgataaacattacatagcaaaacagctgcga
gcaggagctggctatatcctggaagacttcaatgaaacccagtgtaacgcggcataccag
tgtcttctgattgcggaccagcattgtcgaactcggaaatacttgctgtgccttgccaga
gggatcccttgtgtgtctcatatctgggtccatgatagctgtcatgctaaccagcttcag
aattatcgcaattaccttttgccagctggatatagcctccaggagcaaaaattgctagaa
tggcacccacgagaaaacccattccataacctgaaggttctcctggtgtcagaccagcaa
gagaacttcctggatctgtggtctgaaattctcatgacagggggagcagcatctgttaaa
cagcattactcaagtgctcacaacaaagatcttgctttgggtgtttatgatgtggtggtg
actgatttttcctgcccagctggcatcttgaagtgtgcagaagctttacggctgcctgtt
gtctcgcaagagtgggtgatccagagccttattgctggggaaagagtaggctacaagcag
catccaaaatataaacatgattatgtctctcactga
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