Parus major (Great Tit): 107209415
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Entry
107209415 CDS
T04864
Symbol
NALCN
Name
(RefSeq) sodium leak channel non-selective protein isoform X1
KO
K21863
sodium leak channel non-selective protein
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmaj04040
]
107209415 (NALCN)
Ion channels [BR:
pmaj04040
]
Voltage-gated cation channels
Sodium leak channel, non-selective
107209415 (NALCN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
PsaF
DUF5914
Phage_TAC_15
FAM165
Motif
Other DBs
NCBI-GeneID:
107209415
NCBI-ProteinID:
XP_015494622
Ensembl:
ENSPMJG00000001709
LinkDB
All DBs
Position
1:37771098..38001613
Genome browser
AA seq
1762 aa
AA seq
DB search
MLKRKQSSRVEAQPVTDFGPDESLSDNADILWINKPWVHSLLRICAIISVISVCMNTPKT
FEHYPPLQYVTFALDTLLMFLYTAEMIAKMHIRGIVKGDSSYVKDRWCVFDGFMVFCLWV
SLVLQVFEIAEIVDQMSPWGMLRIPRPLIMIRAFRIYFRFELPRTRITNILKRSGEQIWS
VSIFLLFFLLLYGILGVQMFGTFTYHCVTDDTQPGNVTWNNLAIPDTHCSRELEEGYQCP
PGFKCMDLEDLGLSRQELGYSGFNEIGTSIFTVYEAASQEGWVFLMYRAIDSFPRWRSYF
YFITLIFFLAWLVKNVFIAVIIETFAEIRVQFQQMWGSRSSTTSTATTQMFHEDAAGGWQ
LVAVDVNKPQGRAPACLQKMMRSSVFHMFILSMVAVDVIVAASNYYKGENFKRQYDEFYL
AEVAFTVLFDLEALLKIWCLGFTGYISSSLHKFELLLVIGTTLHIYPDLYHSQFTYFQVL
RVVRLIKISPALEDFVYKIFGPGKKLGSLVVFTASLLIVMSAISLQMFCFVEELDRFTTF
PRAFMSMFQILTQEGWVDVMDQTLNAVGHMWAPVVAIYFILYHLFATLILLSLFVAVILD
NLELDEDLKKLKQLKQSEANADTKEKLPLRLRIFEKFPNRPQMVKISKLPSDFTVPKIRE
SFMKQFIDRQQQDTSCLLRRLPSASSSSCDHSKRSAIEENRYIDQKGNQNTFLPCNEEMN
KDLKVVSATQLRKSVFSIRARNLLEKETAINKILRACTRQRMLSGSFEGQPAKERSILSV
QHHIRQERRSLRHGSNSQRISRGKSLETLTQDHSNTVRYRNAQREDSEIKMIQEKKEQAE
MKRKVQEEELRENHPYFDKPLFIVGREHRFRNFCRVVVRARFNASKTDPVTGAVKNTKYH
QLYDLLGLVTYLDWVMIIVTICSCISMMFESPFRRVMHAPTLQIAEYVFVIFMSIELNLK
IMADGLFFTPTAVIRDFGGVMDIFIYLVSLIFLCWMPQNVPAKSGAQLLMVLRCLRPLRI
FKLVPQMRKVVRELFSGFKEIFLVSILLLTLMLVFASFGVQLFAGKLAKCNDPHIISRED
CHGIFRINVSVSKNLNLKLRPGEKKPGFWVPRVWANPRNFNFDNVGNAMLALFEVLSLKG
WVEVRDVIIHRVGPIHGIYIHVFVFLGCMIGLTLFVGVVIANFNENKGTALLTVDQRRWE
DLKSRLKIAQPLHLPPRPDNDGFRAKMYDITQHPFFKRTIAVLVLAQSVLLSVKWDAADP
VTVPLATMSVVFTFIFVLEVTMKIIAMSPSGFWQSRRNRYDLLVTSLGVIWVILHFALLN
AYTYMMGACVIVFRFFSICGKHVTLKMLLLTVVVSMYKSFFIIVGMFLLLLCYAFAGVVL
FGTVKYGENINRHANFSSAGKAITVLFRIVTGEDWNKIMHDCMVQPPFCTPDNSTYWKTD
CGNYAGALMYFCSFYVIIAYIMLNLLVAIIVENFSLFYSTEEDQLLSYNDLRHFQIIWNM
VDDKREGVIPTFRVKFLLRLLRGRLEVDLDKDKLLFKHMCYEMERLHNGGDVTFHDVLSM
LSYRSVDIRKSLQLEELLAREQLEYTIEEEVAKQTIRMWLKKCLKRIRAKQQQSCSIIHS
LRESQQQELSRFLNPPSIETTQPSEDMNAINQDNSAQPETSSQQQLLSPTLSDRGGYRQE
TGDAGKPQRKFGQWRLPSAPKPISHSVSSVNLRFGGRSTMKSVACKMNPMSDAASCGSEV
KKWWTRQLTVESDESGEDLLDI
NT seq
5289 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaaaggaaacagagttccagggtggaagcccagccagttacagattttggtccc
gatgaatctttgtcagacaatgcagatattctgtggattaacaaaccttgggtgcactct
ttactacgaatttgtgccatcatcagtgttatttctgtgtgtatgaacactccaaaaacc
tttgagcattatccgcctctccagtatgtgacatttgctcttgatactctgttgatgttt
ctttacactgcagagatgatagcaaaaatgcatatccgtgggatagttaagggtgatagc
tcctatgtaaaggatcgttggtgtgtgtttgatggcttcatggtcttttgtctttgggtg
tcactggttttacaggtgtttgaaatagctgaaatagttgaccaaatgtcaccttggggc
atgttacggattccacgacctctcattatgattcgagcattccgaatatattttcgtttt
gagctgccaagaactaggataacaaatatcctgaagcgttctggagagcaaatatggagc
gtttcgattttccttctgttctttcttctcctgtatgggatcctgggagtgcaaatgttt
ggaacttttacgtaccattgtgtgactgatgacactcagccaggaaatgtaacctggaat
aatttagctatcccagacacccactgttccagagagctagaagaaggttaccagtgccca
cctggatttaaatgcatggaccttgaagatctgggactaagcaggcaagagctgggctac
agtggctttaatgagataggcacaagcatatttactgtttatgaagctgcttctcaggaa
ggctgggtgttccttatgtaccgagcaattgacagttttccccgatggcgttcatatttc
tatttcatcaccttaattttctttctggcctggcttgttaagaatgtttttattgcagtc
atcattgaaacgtttgcagaaattagagtgcagttccagcagatgtggggatccaggagc
agtactacttcaaccgccaccacccagatgtttcatgaagatgctgctggaggttggcag
cttgtggctgttgatgtgaataaaccccaaggcagagctcctgcatgtctacagaaaatg
atgaggtcatctgtgtttcatatgttcatactaagcatggttgctgtcgatgtgattgtt
gctgctagcaactactataaaggagaaaatttcaagagacaatatgatgaattttacctt
gctgaggttgcttttacagttctgtttgatttagaagctcttctgaagatctggtgtttg
ggtttcacaggatacatcagctcatctcttcacaagtttgagttactgcttgtaatcgga
accactctccatatttatccagacctctatcactctcaatttacatattttcaggttctt
agagtagttcggcttataaagatttctcctgcattggaagattttgtgtataagatattt
ggaccaggaaaaaaacttgggagtttggtagtatttactgccagccttttgatcgtaatg
tcagcaatcagtttacagatgttttgctttgtggaagagctggatagatttacaaccttt
ccaagggcattcatgtcaatgtttcagattctcacacaggagggatgggtggatgtcatg
gatcagacactgaatgctgtaggacatatgtgggcaccagtagttgctatttattttata
ctatatcatctttttgctactctgattctactcagcttgtttgttgctgttattttggac
aacctggaacttgatgaagatctaaagaaacttaaacaactaaagcaaagtgaagctaat
gcagatacaaaggagaagcttcccttgcgtctacgcatctttgaaaaatttccaaacagg
ccacaaatggtgaaaatctcaaagcttccttcagatttcacagttccaaaaataagggaa
agtttcatgaagcagtttattgatcgccagcaacaagacaccagctgtttgctgcgaagg
cttccttcagcatcttcttcctcgtgtgaccactctaaaagatcagcaattgaagaaaac
agatatattgatcaaaagggtaatcagaatacatttctaccatgtaatgaagagatgaac
aaagaccttaaagttgtctcagccacccagctccgtaaatctgttttcagcatcagagca
agaaaccttctggaaaaagagacggcaatcaataaaattctaagggcctgcactagacaa
cgtatgctgagcggatcatttgaggggcagccagcaaaggaaagatcaatacttagtgtc
cagcatcatatacgacaagaacgcaggtcactgagacatggttcgaacagccagcgaatc
agcagaggaaaatctcttgaaacattgactcaagatcactccaacacagtgagatacaga
aatgcacagagagaagacagtgagataaagatgatccaagaaaaaaaggaacaagctgaa
atgaaaaggaaagtccaggaggaggagctacgagagaatcacccatattttgataaaccc
cttttcatagttggccgtgagcacagattcaggaacttctgccgagtggtggtacgggct
cgcttcaatgcttctaaaacagatcctgttactggagctgtgaaaaataccaaataccat
cagctttatgacttgctgggtttggttacttacctggactgggtcatgatcattgttaca
atatgctcctgcatttccatgatgttcgaatccccttttagaagagttatgcatgctcca
acactccagattgctgaatatgtttttgtaatattcatgagcattgagcttaatctgaag
attatggcagatggcttgttctttacaccaacagctgtcattagggactttggaggagtt
atggacatatttatatatcttgtgagtttgatattcctgtgctggatgcctcagaacgtc
cctgccaaatctggagctcagctcttaatggtgctccgctgcctccgacctcttcgaatt
ttcaaactggtccctcagatgaggaaagtggtgcgagagctatttagtggctttaaggaa
atctttttggtttctattcttctgctgacattaatgcttgttttcgcaagctttggagtg
cagctatttgctggaaaactggctaaatgcaatgaccctcacatcatctctagggaagat
tgtcatggcatcttcagaataaatgtaagtgtttccaaaaatctcaatttaaagttaaga
cctggagagaaaaagcctggattttgggtgccacgagtctgggcaaatcctcgaaatttt
aattttgacaatgtgggcaatgcaatgctggcactatttgaagttctgtcattaaaaggc
tgggtggaagtcagagatgttattattcatcgtgttgggccgatccatggaatctacatc
catgtttttgtattccttggctgcatgattggactgaccctttttgttggagttgtcatc
gccaattttaatgaaaacaaggggacagctttgctgactgtagatcagagacgatgggaa
gatctgaaaagcagactgaagatagcacaacctcttcatctcccacctcgtccggataac
gatggctttagagcgaagatgtatgatataactcagcatccattttttaagaggactatt
gctgtactagttctggcccagtctgtgttgttatcagttaagtgggatgctgcagatcca
gtgaccgtgcctttagcaacaatgtctgttgttttcaccttcatttttgtccttgaggtc
acaatgaagattattgccatgtcaccttctggcttctggcaaagcagaagaaatcggtat
gatctcttggtgacatctcttggagttatatgggtcatacttcactttgccttactgaat
gcatacacatacatgatgggggcatgtgtaattgtcttcaggtttttctccatttgtggg
aagcatgtaacactaaaaatgcttctcctgactgtggttgtcagcatgtacaaaagtttc
ttcatcatagtgggaatgttcttactgcttctttgttatgctttcgctggagtggtgttg
tttggtacagtgaaatatggagagaacattaacagacatgcaaatttttcatcagctggc
aaggctattactgtactcttcagaatagttactggagaagactggaacaaaattatgcat
gactgcatggttcagcctccattttgtacaccagataacagcacctactggaaaacagac
tgtggaaattatgctggtgctctaatgtatttctgttctttctatgtcatcattgcatac
atcatgctaaatttgcttgttgctatcattgtggagaatttctcattgttttactcaact
gaagaagatcagcttttaagttataatgatctaaggcattttcaaattatatggaacatg
gttgatgacaaaagagagggtgtaatccctaccttccgagtgaaattcctgctgaggctt
ctgcgaggcaggctggaggtggatcttgacaaggacaagctgctgttcaagcacatgtgt
tatgaaatggagcgtctccataatggtggtgatgtcacttttcatgacgtactcagcatg
ctttcatacaggtcagttgatatcagaaaaagtcttcagctggaggagctgcttgctagg
gaacagctggaatataccatagaagaggaggtggccaaacagaccatacgaatgtggctg
aaaaagtgcttaaagagaatcagagcaaaacagcagcagtcgtgcagcattatccacagc
ctacgagagagccaacagcaggagttgagccgatttctgaatcctcccagcattgagaca
acacagccaagtgaagatatgaatgctattaatcaagataacagtgcacagccagagaca
agtagccagcagcagctgcttagcccaacactttctgacagaggtggctatagacaagag
acgggagatgctgggaaacctcagcggaaatttggacaatggcgcttgccatcagccccc
aaaccaataagccattcagtgtcttcagtcaacctccgttttggtggacgttcaactatg
aaatctgttgcatgcaaaatgaatccaatgtctgatgctgcttcctgtggatcagaagtc
aagaaatggtggacaagacaattaactgtggagagtgatgagagtggagaggaccttctt
gatatctga
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integrated database retrieval system
