Parus major (Great Tit): 107209593
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Entry
107209593 CDS
T04864
Symbol
USP16
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16 isoform X1
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
107209593 (USP16)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pmaj01002
]
107209593 (USP16)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmaj04121
]
107209593 (USP16)
Enzymes [BR:
pmaj01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107209593 (USP16)
Peptidases and inhibitors [BR:
pmaj01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
107209593 (USP16)
Ubiquitin system [BR:
pmaj04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107209593 (USP16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
Zn_ribbon_19
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
107209593
NCBI-ProteinID:
XP_015494985
Ensembl:
ENSPMJG00000011939
LinkDB
All DBs
Position
1:98244248..98263016
Genome browser
AA seq
821 aa
AA seq
DB search
MGKKRIKGKTAQSDESPDMLEPVCKHFRKGLDQGQVRRALHNVEWHVCQDCKADSKTQEK
AEDKETDEGTSIWLCLKCGHRGCDRNSPDQHALKHYETPRSDPHCLVLSLDNWSVWCYQC
DNEVPYKTSTLLGQTVDFVRKQVGIDSSHAEKQENKEVENKKVEKDSKNEQEKEVSLKEE
NSHSTANGEVTVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEAKVPGTTVKIESPELCM
EPQLIKLDQPGPLTLAMHQFVTEMQETKKGVVTPKELFAQVCKKAIRFKGYQQQDSHELL
RYLLDGMRAEEIQQISVGILKALSDSNKQNEEELKKKIKEYEKKKGIQSFVDRIFGGELT
STIMCEECRTVSLVHESFLDLSLPVLDVQKVKITKRENIKKKKEKESEDEENKINDHYLK
QKDELPRTSKHLEKKEKKQARKRAKSQRRQQKLQGKVFQLTDLCTTEQPEVDVEYNQESE
TEISSETLEKKQEEESSHDCKDHCLTQKDLSIQGNSTEIQSRHENTGKPEQECEENESFT
DLSMEGLDSTMKFVNGLDNLSLKEEDDENADEEELATDFSKLHLSASESDASTLDGLQPV
PNKTCEVSTDDPETAFCTLANREELNPEEDSIHHCLYQFTRNETLTETNKLLCDVCTQRH
CGPKNNIKSEKKYVYTNAKKQMLISLAPPILTLHLKRFQQAGFNLQKVNRHIKFPEVIDL
APFCTAKCKNVAEGNTKVLYSLYGVVEHSGTMRSGHYTAYVKMRAMNNHLSDLVLRGQSQ
ASETEPVKGQWFHISDTHVQPVSVSKVLSSQAYLLFYERLL
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagaaacgcatcaaaggcaaaactgcacagtctgatgagtctccagatatgctg
gaacctgtgtgcaagcattttcgtaaaggactggaccaagggcaagtgagaagggcactg
cacaatgtggagtggcatgtttgtcaggactgcaaggcagacagtaagacacaagagaag
gctgaggacaaggagactgatgaaggcacctcgatatggttatgcctaaaatgtggccat
aggggctgtgacagaaattctccagaccagcatgctttaaagcattatgaaacaccaaga
tcagatccccactgtctggttctcagtttggacaactggagtgtgtggtgctaccaatgt
gataatgaagttccatataaaacttcaacccttttgggccagactgtggattttgttaga
aaacaagttggtattgactcatcacatgcagaaaaacaagagaacaaagaagttgaaaat
aaaaaagtagaaaaagacagcaaaaatgagcaagaaaaagaagtttcacttaaagaagaa
aattcccattcaactgctaatggagaagtcactgtgaaaggacttagtaatttggggaat
acatgtttctttaatgcagtgatgcagaatttatcacaaactccagtcctgagggagctg
cttaaagaagctaaagtgcctggcacaacagttaaaattgagtcacctgagctatgcatg
gaacctcagctaataaaactggaccagccaggtcctttaacactagccatgcatcagttt
gtgacagaaatgcaagagacaaaaaaaggcgtagtgactcctaaggaactttttgctcag
gtttgcaaaaaagcaatacgattcaaaggttatcagcagcaagacagtcatgaattgctt
cgttacttacttgatggaatgagagcagaggaaatccaacaaataagtgttggaatacta
aaggcgctgagtgactctaacaaacaaaatgaagaagaacttaaaaagaaaattaaagaa
tacgaaaagaaaaagggaatacaaagttttgtagatcgaatctttgggggagaattaacc
agcacaattatgtgtgaggaatgcagaactgtgtccttggtccatgagtctttccttgat
ttgtcgcttcctgtactagatgttcagaaagtgaaaattacaaagagagaaaatattaag
aaaaaaaaagaaaaggagtctgaagatgaagagaataaaatcaatgaccattaccttaag
cagaaagatgagctccctcgtacaagtaagcacctagagaaaaaagagaagaaacaggcc
agaaaacgagccaagagccaacgccggcagcaaaaacttcaaggaaaggtgtttcagttg
acagatctctgcacaactgaacagccagaggtagatgtagagtacaaccaagaatcagag
actgaaataagctctgaaactcttgaaaagaagcaagaagaggaatcatcacatgattgc
aaagatcactgcttaactcagaaagacttgagtatacagggaaatagtacagagattcag
agcaggcatgaaaatacaggaaagccagaacaagagtgtgaggaaaatgagtctttcaca
gatctctctatggaaggcttagattctactatgaagtttgtcaatggccttgacaacctg
tctttgaaagaggaggatgatgaaaatgcagatgaagaagagcttgctacggacttttca
aaactccacctgagtgccagtgaatctgatgcaagtaccttggatggcctacagcctgtt
cctaacaaaacatgtgaagtatctacagatgaccccgaaacagcattctgtactctggca
aacagggaagagttgaaccctgaggaagattcaatccatcactgtttgtatcaatttacc
cgtaatgaaacacttaccgaaaccaataaactactgtgtgatgtgtgtacacaaaggcat
tgtggaccaaagaacaacataaaaagtgaaaagaagtatgtttatactaatgccaaaaag
cagatgctcatctctctagctcctccaattttaacccttcacttaaaaaggtttcagcag
gctggatttaatctgcagaaggttaacaggcatatcaagttcccagaagtgatagacttg
gctcctttctgtacagctaaatgtaaaaatgtggctgaagggaatacaaaggtcttgtac
tctctctatggagttgttgaacacagcggaacaatgaggtctgggcactacactgcctat
gttaaaatgagagctatgaacaaccacctctctgatcttgtccttcgaggacaatctcaa
gcttcagaaactgagccagtgaaaggtcagtggttccacatcagcgatacccatgtacaa
cctgtctctgtgtccaaagtgctgagctcccaagcctatcttctgttctatgagaggctg
ctgtaa
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