Parus major (Great Tit): 107209664 Help Entry 107209664         CDS       T04864                                  Symbol NLRC5 Name (RefSeq) protein NLRC5 isoform X2   KO K22615   NLR family CARD domain containing 5 Organism pmaj  Parus major (Great Tit) Brite KEGG Orthology (KO) [BR:pmaj00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04054 Pattern recognition receptors [BR:pmaj04054]     107209664 (NLRC5) Pattern recognition receptors [BR:pmaj04054]  Cytoplasmic pattern recognition receptors   NOD-like receptors    107209664 (NLRC5) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LRR_6 NACHT Atypical_Card LRR_4 NLRC4_HD2 LRR_8 LRR_NXF1-5 NPHP3_N AAA AAA_16 AAA_22 AAA_19 NOD2_WH RNA_helicase Motif Other DBs NCBI-GeneID:  107209664 NCBI-ProteinID:  XP_015495057 Ensembl:  ENSPMJG00000014080 LinkDB All DBs Position 11:6447244..6480922 Genome browser AA seq 1911 aa AA seqDB search MSTASSWLVPECPMGCPCPSQSCCQALCRQGLPSFHPCDWAQISVLNSGLRPPFQNEDLD LQAAVARARPQLVELLAHCPDWLLTTSQHFIPEAALGSLGAITNPRHKTSLLLELLEEAG PAAWSHFAQSVCMECDLPLDLEVLLMSSVGEGNFSQTEEADTDMRARSPVPKGSARRHRC SSSGSDKDAKQQRLDSSVKYQHLLINSILQRYGSRREAGAEEQAQPLPFNQTFVNVVIRQ SKAPRLFKERAERPRGDVAGAPEPEECADTAVKVSDLLCSEAPSHMTKVIFLFGKPGTGK TRLMHRICQKWAEGVLPQFHFTFLFEFRQLNLLKRKLTLKELLFDMFLQPEDSPDAVFQG LLESAQQTLIIFDGLDEFAANMDVSSSSKGGPAPTCPVSISQLFADLCHGKILPGCTVLV TSRPKRLPGFLLYTVSVLAEIWGFDHEKVEEYVSHYFCQHSCREQAIAHVKNNTKLLSMC LIPALCNIVCICLEYLLLKHQMSVELPQTMTQFYIKMFLIFLNKQQGDCAGDEETQLNCN KKAILGLFDLALRGLEEKKLVFYVGDIPEDVKEFALLHGLLTVFEVKTSGTCPEVGYAFV HLSLQEFFAALCLMVSRRVDKNHLKKKFFLKSKWTSKNETKTEFMESFHIFLSGLSSREC RTFLMLLAEQDEAWVQEKQDVILQSLKKLAATHLSGPKVLELCHCTFETQNLEVAQHIGN LLNFKYEFKNFRLTMLDMSALVFVINSGQDLICLDFAGCLVDTDCLEVLAGCKNVEHLSF RSRRCGDNFAAALSKALQGMGSLKKLELTGGSITAEGMTSLVQAASQCLQLEEINLQGNR IRDPEVKRVMDLFSKMEKLKKVDLSNNNLSLNAVLSLAKEGIMCQNVTELCARGDTMIIY FSGAPGEAERSLDLKLEENKEPIIPTRCVNLCLQDHRLSSQHARMIVDLLQSCPCLSEVD LSGNMLGDEGCSCLVESLPCISISKQLNLSRNRLSVTGICSLLKSVNSCQKVMEVQVSLC NDTAVLRFREDREFASLPPREEPVSSTDDQQHEEENQTPATSQKIRLTDCNFQASDLKNL CAVLKECGHISELDLSRNYLGDEGLLQLFQCLPKLKMLHCLKFNNNQISLDSVFFLAQSL TTLEHIKTMSLSLGLTQVVHLTFWERVRSTSRWRSVSLAHPKEEAQGRCFRLRDCKVGPE DVTRLCQILAQCPQLTEINLSRNSLSDQSIERLLSFLPSLCDLTLLSIRTNSLSPHCAVL LLNSINVCERVRVVEVWSSENAFLHLGASMRSQKTSCRLTGCALGQGQVEELCSILEQHG WLAEIDLSRNQLGDEGLRYLLDHLHRVPSSCSLNLSHNGISQDGVLHLVNAFVTSRNTTE IQVSLCSKATLIIKLTSGDDARKGQEKVLRLAECNFQPEHLERLFLLLEKCTYLTEYKSS NNNMTVQAAERLLHSLRRDVGLLKISIEEPWVCQERVMNLLELAVQTSGNVTEITICKDK SLFQLVIRFPSCLEKTESVISRLSLHKPEIKHSFCQRLREKCAQLQELRWSHVELHEDEA EMLVRILLPLPELKTFGLTSSSAAATGIDYLISGLQNCQAIEELNLGYMELSSAAVPELV LGLCGMPSLKRLILNHNSIGNDGCSRLAEALRKMHNMEEINLSHNKIGDPGLINLAAVLL EMQNLKKINLSGNCPSPAGGEKLMEALAHCRHIKELLLSRNGFGDRTAVTLALCLPRMTN LKILHFQNNNIGQAGGLELARALVVCEQLEEISLSENNLGEQSIHALSKGLPCFRHLRRM DLKFCGITDRASKSLCLGFRQCPSMEEIILSWNALGDGGARELAIALPKMEKLKVLDLEK NCVGACGATKLAEELAKCPEIQFLRLWDNPVPKGLAERLTSQDPRLCFSFS NT seq 5736 nt NT seq  +upstreamnt  +downstreamnt atgtcaacagcttcttcttggctggtgccagaatgtcccatgggttgcccctgtccttca cagtcctgctgtcaggcactgtgcagacaaggactgccatcctttcacccctgtgactgg gctcaaatctctgttctgaactcaggactaaggcccccgtttcagaatgaggacctagac ctgcaagcagctgtagcaagagcccgtccccagctcgtggagctcctcgctcactgtccc gactggctgctcaccacctcccagcacttcatccccgaggcagccctgggcagcctgggt gccatcaccaaccccagacataaaacctcactgctccttgagctgctggaggaggctggt cctgctgcctggagccactttgcacagtctgtctgcatggaatgtgacctgcccctggat ctggaggtcctgctcatgagctctgtgggagaaggtaacttcagccagacagaagaagca gacacagatatgagagctcgatcacctgtgccaaaagggtctgctcgccgtcaccgttgc agcagctctgggagtgacaaggatgccaaacagcagcgactggattcatctgtgaagtac cagcatctcctcatcaactctatcctccagagatacggaagcaggagagaagcaggagca gaagaacaagcacagccactgcctttcaaccaaacctttgtcaacgttgtcatccgtcag agcaaagcccccaggttgtttaaagagagagcagagagaccccggggggacgtggcaggt gctcctgagccagaggaatgtgcagacacagctgtgaaagtgtcagatctgctttgtagc gaggccccatcgcacatgaccaaggtgatctttttgtttggcaaaccaggcacaggcaag accaggctgatgcacaggatttgtcagaaatgggcagaaggtgtcctacctcagtttcac ttcactttcctgtttgagtttcggcagctgaatttgttaaaaagaaaattgacactgaag gagcttttgtttgacatgttccttcagccagaggacagccctgatgcagtgttccagggc ctcctggagagtgcccagcagactctgatcatctttgatgggctggatgagtttgcagct aacatggacgtgtcatcctcctctaagggaggcccagctccgacctgccctgtgtccata tcccagctctttgcagacctctgtcatgggaagatcctgcctggttgcacagtgttggtc accagccgacctaagaggctgcctggatttttattgtatacagtaagtgtgctggcagag atttggggatttgaccatgagaaggttgaggaatatgttagccactatttttgtcagcat tcctgcagagaacaagccattgcccacgtgaagaacaacaccaaactcctcagcatgtgc ctcatccctgctctgtgtaacattgtgtgcatctgcttggagtatttgctccttaaacac cagatgagtgtggagcttcctcagactatgacacagttttatatcaaaatgtttctcatc ttcctaaacaagcagcaaggagactgtgcaggtgatgaggagactcagctgaactgtaac aaaaaggccattttgggtctgtttgatcttgcactgagaggcctggaagagaagaaactt gtattttatgttggtgatattcccgaggacgtgaaggaatttgctttgttgcatggattg ctgactgtctttgaggtgaagacgagtggcacatgcccagaggttggctatgcctttgtg cacctgagcttgcaggagttttttgcagcactgtgtctcatggtgagtaggagggtggac aagaaccacttgaagaagaaattcttcctgaagtcgaagtggacttcaaaaaatgagaca aagactgagtttatggagagttttcacatatttctctcgggtttgtcgtcaagagagtgt aggacattcctcatgctgctggcagagcaagatgaagcttgggtgcaggaaaagcaggat gtgatcctacagtctctcaagaaactggcagccactcatctgtcagggcctaaggtcctt gagctctgccactgcacctttgaaacacaaaacctcgaagtagcccagcacattgggaac ctgctgaatttcaagtacgagtttaaaaacttcagactgacgatgctggacatgtcggct ttggtttttgtcataaactcgggccaggatttgatttgtttggattttgcaggatgtctt gtggacactgactgtttggaggttctggctggctgtaaaaatgtggaacacttgagtttt cgtagcaggagatgtggtgataactttgctgctgctctttcaaaggccttgcaaggaatg gggagcctgaagaaacttgagctgacaggggggagcatcacagctgaggggatgaccagc ttggtccaggctgcatcacagtgcctccagcttgaggaaataaacttgcagggcaatcgg atacgggacccagaagtgaagagggtgatggacctgttttccaaaatggaaaagctgaag aaagtagacctgagcaacaacaatctttccttgaatgctgttctcagtttggcaaaggaa ggcatcatgtgtcaaaatgttactgagctgtgtgccaggggggacaccatgattatttat ttttctggcgcccctggggaagctgaaagatctttggatttgaagttggaagagaataaa gaacccataattccaactagatgtgtgaatttatgcttgcaggaccacagattgtcttcc caacatgccaggatgattgtggaccttctccagagctgtccctgtctctctgaagtggat ttatcaggcaacatgcttggagatgaaggctgcagttgtctggtggaaagcctcccctgt atatcaatttcaaagcagctgaatctcagtcgaaaccgcctctctgtcactggcatttgc agcctgttgaagtcagtaaatagctgccagaaggtgatggaggtgcaggtcagcctttgt aatgatactgcagtcctgagatttagagaagacagggagtttgcttcccttcctcctagg gaagagcctgtgtcctctactgatgaccaacaacatgaggaggaaaaccagacacctgcc acctcccagaaaataagactgacagactgtaattttcaagccagtgacctgaagaatctg tgtgcagtcctgaaggaatgtggccacatctctgagctggacctatcacgtaattatctg ggagatgaggggttgttgcagctgtttcagtgcctcccaaaactgaaaatgttgcattgt ctcaagtttaacaacaaccagatctccctggactctgtgtttttcttagctcagtcatta actactctggaacacattaaaacaatgagcctcagcttaggactcacacaggtggttcat ctgaccttttgggaaagagtcagaagtaccagcagatggagaagtgtttccctggcacat cccaaggaggaagcccaaggacggtgctttcgtctcagggactgcaaagtgggtccagag gatgtgaccaggctgtgccagatactggctcaatgtccccagctgacagaaatcaatctg tctagaaattcattgagtgaccagagcatcgagagattactgagttttctgccgtccctc tgtgatctgacactactgagtattaggacaaactccttgtccccacattgtgctgtttta ctcctcaactccatcaatgtctgtgagcgggtcagagtggtggaagtctggtcaagtgaa aatgccttcttgcatttaggagcaagcatgcgaagccaaaagacatcctgcaggctgaca ggctgtgccctcgggcaggggcaggtggaggagctctgcagcatcctggagcagcacggg tggctggcagaaatcgatctctccaggaatcagctgggagatgaaggcctgaggtacctc ttggaccacttgcatcgggtgcccagtagctgttccctcaatctcagccataatgggatt tctcaggatggagtcctacatctcgtaaatgcctttgtcacatccagaaacaccactgaa attcaagtcagtttgtgctcaaaagcaactttaatcatcaagctgacaagtggagatgac gcaagaaagggtcaagaaaaggttttgagactggcagagtgcaactttcagccagagcac ttggaaaggttgttcctgctcctggaaaagtgcacttacctgacggagtacaagtcctca aataacaacatgacagtccaagctgcagaaagacttttgcattccctgaggagagatgtg gggctgctgaaaatcagcatagaagagccatgggtgtgccaagagagagtcatgaacctt ctggagctggctgtccagacctctggaaacgttactgagatcacgatatgtaaagataaa tccctcttccaattagtcataagattcccaagctgcctggagaagacagaatcagtcatt agcagactgagtctgcacaagccagaaatcaagcactccttctgccaaaggcttcgtgag aaatgtgctcagcttcaggagctgagatggtctcacgtggaactccacgaggatgaagca gaaatgctagtcaggattttgctaccccttccagagctgaagacatttgggctgacctct agcagtgctgcagcaactggaatcgattatttgatctcaggcttgcagaattgccaggcc attgaagaactcaacctgggctacatggagctcagcagtgctgctgtccctgagcttgtg ctggggctctgtgggatgccatccctgaaaaggctgatcttgaaccacaacagtattggg aatgatggctgctccagactcgcagaagccttgaggaaaatgcacaacatggaggaaatc aatttaagccacaacaagattggagatccaggcctgataaatcttgctgctgtcctgctg gaaatgcaaaacctgaagaaaatcaacctttcagggaactgtcctagtcctgctggaggg gaaaagttgatggaagctcttgcccattgcaggcacatcaaggagttactactatcaagg aatggttttggagacaggacagcagtgactcttgccctctgtctgcctcgcatgaccaac ctgaagatcctgcacttccagaacaataacattgggcaggcaggagggctggagctggcc agagccctggtggtgtgtgagcagctggaagagatcagtttatcagaaaacaaccttggg gaacagagtatccatgccctgtccaaggggctgccgtgcttccgacacctccggaggatg gacttgaaattctgtggaatcactgaccgtgcttcaaaatccctctgtcttggcttccga cagtgcccttccatggaggagatcatactgtcttggaatgcccttggagatggaggagcc cgagagttggccattgctctcccaaagatggaaaagctgaaggtgttagacctggagaaa aactgtgttggagcctgtggggccacaaagctggcagaggaacttgccaagtgcccagaa attcagttcctaaggctgtgggacaacccagtgcccaagggcctcgcggagaggttgaca agccaagacccaagactgtgtttctccttcagctag

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