Parus major (Great Tit): 107209670
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Entry
107209670 CDS
T04864
Symbol
CTCF
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmaj03000
]
107209670 (CTCF)
03036 Chromosome and associated proteins [BR:
pmaj03036
]
107209670 (CTCF)
Transcription factors [BR:
pmaj03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
107209670 (CTCF)
Chromosome and associated proteins [BR:
pmaj03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
107209670 (CTCF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
zf-C2H2_ZN142
Zf-C2H2_ZNF451_C
zf-C2H2_7th_ZNF462
zf-met
zf-C2HE
zf-C2H2_6
Zf-C2H2_ZNF451
zf-C2H2_15
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
107209670
NCBI-ProteinID:
XP_015495077
Ensembl:
ENSPMJG00000014214
LinkDB
All DBs
Position
11:6932483..6963960
Genome browser
AA seq
750 aa
AA seq
DB search
MKRTNQSRQKCRSVKNINQEGEMEGEAVDAIVEESETFIKGKERKTYQRRREGGQEDDAC
HIPPNQADGSEVVQDVSSGVQMVMMDQLDPTLLQMKTEVMEGAVPQETEATVDDTQIITL
QVVNMEEQPINLGELQLVQVPVPVTVPVATTSVEELQGAYENEVSKGGLQEGEPMICHTL
PLPEGFQVVKVGANGEVETLEQGELQPQEDPNWQKDPDYQPPAKKTKKNKKSKLRYTEEG
KDVDVSVYDFEEEQQEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRR
SNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELV
RHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHM
RTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRK
QHSYIEQGKKCRYCDAVFHERYALIQHQKSHKNEKRFKCDQCDYACRQERHMVMHKRTHT
GEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCS
GLDGGEGENGGETKKGKRGRKRKMRSKKEDSSDSEENAEPDLDDNEDEEETAVEIEAEPE
VEQEAPAPPPSKKRRGRPPGKAAAQPKQSQPAAIIQVEDQNTGEIENIIVEVKKEPDAEA
AEEEEEAQPAVVEAPNGDLTPEMILSMMDR
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaacaaatcagtccaggcagaagtgcagaagcgtcaagaacataaatcaggaa
ggtgaaatggaaggtgaggcagtcgacgctattgtggaggaatcagaaacttttattaag
ggaaaagagaggaaaacctatcaaagacgccgtgaaggtggacaagaagatgatgcttgt
catataccaccaaaccaagcagatggaagcgaagtggtgcaggatgtcagcagtggggtg
cagatggtgatgatggatcagctagatccaactcttcttcaaatgaagaccgaagtaatg
gaaggtgcagtgcctcaagaaacggaggctactgtggatgacacacagatcataacactt
caggttgttaatatggaagagcagcctataaaccttggtgagcttcagctggttcaagta
cctgtaccagtgactgtacctgttgccaccacgtctgtggaagaactgcagggagcttat
gaaaacgaggtttccaaaggaggcctgcaggagggggagcccatgatctgtcacaccctc
cctttaccagaaggcttccaagttgtgaaagtgggtgcaaatggtgaggtggagacactg
gaacaaggtgagcttcagccacaggaagatcccaattggcaaaaagatccagactatcag
ccaccagccaaaaaaacaaagaaaaacaaaaagagtaagcttcgctacactgaggaaggc
aaagatgtggatgtctctgtatatgactttgaagaggagcagcaggagggtttgttgtcc
gaggttaatgcagaaaaggtggtgggcaatatgaagccaccaaaaccaacaaaaattaaa
aagaaaggtgtaaagaagacattccagtgtgaactgtgcagttacacttgtccgcgtcgt
tccaacttggaccgccacatgaaaagccacaccgatgaaagaccacacaagtgccatctc
tgtggcagggctttccggacagtcacattgctgaggaaccacctcaacactcacacaggt
actcgccctcacaagtgcccagactgcgacatggcctttgtgaccagtggagagttggtt
cggcatcgccgctacaaacacacccacgagaaaccattcaaatgttccatgtgtgactat
gccagtgtggaggttagcaaattgaaacgccacatccgttcgcacaccggagagcgcccg
ttccagtgcagcctgtgcagctatgccagcagagacacctacaaactgaagaggcacatg
aggacccactccggagagaagccatatgaatgttacatctgccatgctcgcttcactcag
agcggtaccatgaagatgcacattttgcagaagcacacggagaatgtggccaaattccac
tgtcctcactgtgatactgttatagcgagaaagagtgacctgggtgtccacttgcggaag
cagcattcctacattgagcagggcaagaagtgtcgctactgtgacgctgtgttccatgag
aggtatgccctcatccagcatcaaaagtcccacaagaatgagaagcgcttcaagtgtgac
cagtgtgattatgcctgcagacaggagcggcacatggtcatgcacaaacggacccatact
ggagaaaagccttatgcctgtagccattgtgataaaaccttccgccagaagcagctcctc
gacatgcatttcaagagataccacgatcccaactttgtccctgctgcctttgtctgctcc
aagtgtggcaaaacattcactcgcaggaacacaatggccagacatgctgataactgctct
ggcctagatggtggagaaggagagaatggaggagagacaaagaaagggaaacgtggccga
aagagaaagatgcgttctaagaaagaagattcttctgatagtgaggagaatgctgaacca
gatttggatgataatgaagatgaggaggagacagcagtagaaattgaggctgaaccagaa
gttgagcaagaggctcctgcaccacctcccagtaagaaaagaagaggaagaccaccaggc
aaagctgccgcgcaaccaaaacaatcccagcctgcagcaatcattcaggttgaagaccag
aacactggtgaaattgagaatattatagtagaagtgaagaaagaacctgatgcagaagca
gcagaggaagaggaggaagctcagcctgctgtagtggaagctcccaatggagacctcacc
cctgagatgattctcagcatgatggaccggtga
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