Parus major (Great Tit): 107209807 Help Entry 107209807         CDS       T04864                                  Symbol SF3B3 Name (RefSeq) splicing factor 3B subunit 3   KO K12830   splicing factor 3B subunit 3 Organism pmaj  Parus major (Great Tit) Pathway pmaj03040   Spliceosome Brite KEGG Orthology (KO) [BR:pmaj00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     107209807 (SF3B3)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:pmaj03021]     107209807 (SF3B3)    03041 Spliceosome [BR:pmaj03041]     107209807 (SF3B3)    03036 Chromosome and associated proteins [BR:pmaj03036]     107209807 (SF3B3) Transcription machinery [BR:pmaj03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      107209807 (SF3B3) Spliceosome [BR:pmaj03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     107209807 (SF3B3)  Complex B     107209807 (SF3B3)  Complex C    U2 SnRNP specific factors     107209807 (SF3B3) Chromosome and associated proteins [BR:pmaj03036]  Eukaryotic type   Histone modification proteins    HAT complexes     STAGA complex      107209807 (SF3B3)     TFTC complex      107209807 (SF3B3) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Beta-prop_RSE1_1st Beta-prop_RSE1_2nd CPSF_A Beta-prop_BBS7 Motif Other DBs NCBI-GeneID:  107209807 NCBI-ProteinID:  XP_015495360 Ensembl:  ENSPMJG00000000287 LinkDB All DBs Position 11:complement(7580435..7608960) Genome browser AA seq 1217 aa AA seqDB search MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNVFEKIHQETFGKSGCRRIVPGQY LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILCCQIADLANEDT PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG DEWYVLVGVAKDLILNPRSVAGGFVYTYKLVNSGEKLEFLHKTPVEEVPAAIAPFQGRVL IGVGKLLRVYDLGKKKLLRKCENKHIANYICGIQTIGHRVIVSDVQESFIWVRYKRNENQ LIIFADDTYPRWVTTATLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVAEELDRT PPEVSKKLEDIRTRYAF NT seq 3654 nt NT seq  +upstreamnt  +downstreamnt atgtttctgtacaacctaaccttgcagcgtgccacaggcattagctttgctatccatggc aatttctcaggaaccaaacaacaagaaattgttgtttcccggggcaagatcctggagtta cttcgccctgatcccaacacaggcaaggtccacactctgctgaccgtggaagtgttcgga gtcatccggtccctcatggcctttaggctgacaggggggaccaaagactacattgtggtg ggcagcgattcggggcgcatcgtcattctggagtaccagccctccaagaatgtgtttgag aagatccatcaggaaacctttggcaagagtggatgccgcagaatcgttccaggccagtat ttggctgtggacccaaagggccgtgccgtcatgatcagtgccattgaaaagcagaagctg gtgtatatcctgaacagagatgctgctgctcgactcaccatttcctccccactggaagcc cacaaggccaataccttggtctaccatgtggtaggagtcgatgtggggtttgaaaaccca atgtttgcttgtctggaaatggattatgaggaagcagacaatgatcccacaggtgaagct gcagccaacacacaacagacattgacgttttatgaattggacttgggtttgaaccatgtt gttaggaaatacagtgagcccctggaagagcatggcaacttcctcataacagttccgggt ggttctgatggccccagtggggtactgatctgttctgaaaattatattacttacaaaaac tttggtgaccagcctgatatcagatgcccaattcccaggagacggaatgacttggatgac ccagagaggggtatgatttttgtctgctctgctacacataagaccaagtccatgttcttc ttcctggcccagacagagcagggagacatcttcaaaattactctggagactgatgaagac atggtaacagagattcgactgaagtactttgacactgttcctgttgctgctgccatgtgt gtgctgaaaacagggtttctctttgtggcatctgaatttggaaaccattacctgtaccag atagctcacctgggggatgacgatgaggagccagagttttcctctgccatgcctcttgag gaaggagatacattcttttttcagccacgacctctgaagaacctggtgctggtggatgag ttggacagtttgtctcctattctgtgttgtcagatagcagatttggccaatgaagacaca ccccagttgtatgtggcatgtggtcgggggcccaggtcatccctgagggttttaagacat ggacttgaggtatccgaaatggccgtctcagagctgcctggtaaccccaatgctgtatgg actgtgaggaggcatgttgaagatgaatttgatgcttacattattgtgtccttcgtaaat gccacactggtgctgtctatcggagagactgtagaagaagtgactgactctggattcctg ggtactacacccaccttgtcctgctctcttcttggtgatgatgctttggtacaggtttat ccagatgggattcggcacatccgagcagataagagagtaaatgaatggaagacaccagga aagaaaaccattgtaaaatgtgctgtgaaccaaagacaagtagtgatagcactgactgga ggagaactggtttactttgagatggacccgtcaggacagctgaatgagtacacagagaga aaggagatgtcggccgacgtcgtttgcatgagcctggccaacgttccccctggggagcag cgttcccgcttccttgctgttggactggtggacaacactgtcagaattatttcacttgac ccttcggattgcttacagcccctgagtatgcaggcgctgcccgcacagcccgagtcgctg tgcatcgtggagatgggtggcacagagaagcaggatgagctgggagagaggggctccatt ggctttctgtacctgaacattggactgcagaacggtgtgctgctgcgaaccgtcctggac cccgtcaccggcgatctctctgacaccaggaccagataccttggctcccggcctgtcaaa ctcttccgtgtccgaatgcaaggccaagaggcggtgctggccatgtcaagccgttcctgg cttagttattcctatcagtcacgcttccacctgactcccctgtcttatgagacactggag tttgcatctggttttgcttctgagcagtgccctgagggcattgtggccatctccacaaac acattgaggattttggcactggagaagctgggagcagtcttcaaccaggttgccttccca ttgcagtacacaccccgaaaatttgtcattcacccagaaagcaacaacctgatcatcatt gagacagaccacaatgcttacactgaggccacaaaagcacagaggaagcagcaaatggct gaggaaatggtggaagctgcaggtgaggatgagagggagctggctgcagagatggctgca gcctttctgaatgagaatcttcctgagtccatcttcggtgctcccaaggcagggaatggt cagtgggcctctgttatcagagtgatgaaccccatccagggaaatacattagatctggtc cagctggagcagaatgaagctgctttcagcgtggctgtgtgccggttctccaacaccggt gatgagtggtacgtgctggtgggagtcgccaaggacctgattctgaacccacgctcagtt gctggggggtttgtctacacatacaagctggtgaatagtggtgagaagctggagtttctc cacaagacccctgtggaagaggtccctgcagccattgctccatttcaaggccgagtctta attggagttggaaaactcctgcgtgtatatgacctgggcaagaagaaactgcttcggaaa tgtgagaataagcacattgccaactacatctgtgggatccaaaccattgggcacagagtg attgtctcagatgttcaggagagtttcatctgggtgcgttacaaaaggaatgagaaccag ctcattatctttgctgatgatacttacccccggtgggtcactacagcaacactcctggat tacgacactgtggctggagcagacaagtttggtaacatctgtgtggtgagattgcctccc aacaccaatgatgaggtagatgaggatcccacaggcaacaaagctctctgggacaggggc ctgcttaatggagcatcacagaaggctgaagtgattatgaattatcacgtgggagaaacg gtgctttccttgcagaagaccacactgattccaggaggctctgaatctcttgtttataca accttgtcaggggggataggaatcttggtcccttttacttcccatgaggatcatgacttc ttccagcatgtggaaatgcacttacggtccgagcaccctcctctctgtggacgagaccat ctcagtttccgttcctactacttcccagtgaagaatgtgattgatggggacctgtgtgag cagttcaactccatggagcctaacaaacagaagaatgtggccgaggagctggaccggacc ccacccgaggtgtccaagaagctggaagacatccgcacacgctacgctttctga

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