Parus major (Great Tit): 107209898
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Entry
107209898 CDS
T04864
Symbol
VPS35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107209898 (VPS35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmaj04131
]
107209898 (VPS35)
Membrane trafficking [BR:
pmaj04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
107209898 (VPS35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
FerA
Motif
Other DBs
NCBI-GeneID:
107209898
NCBI-ProteinID:
XP_015495573
Ensembl:
ENSPMJG00000002974
LinkDB
All DBs
Position
11:13597938..13622124
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AA seq
796 aa
AA seq
DB search
MPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVK
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEQADEETTGDISDSM
DFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQ
IVLPGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIII
ALIDRLALFAHREDGPGIPADIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK
CYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLKLKH
FHPLFEYFDYESRKSMSCYVLSNVLDYNTEIVSQEQVDAIMNLVSTLIQDQPDQPAEDPD
PEDFADEQSLVGRFIHLLRSDDPDQQYLILNTARKHFGAGGNQRIRFTLPPLVFAAYQLA
FRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHE
TVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKL
LKKPDQCRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLF
IEILNRYIYFYEKENEAVTIQVLNQLIQKIREDLPNLESTEETEQINKHFHNTLEHLRLR
RESPESEGPIYEGLVL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgccaacaacacagcaatctcctcaggatgaacaggaaaaactcctggatgaagccatt
caggctgtgaaggtgcagtcgttccagatgaagagatgcttggacaagaacaagcttatg
gatgctctgaaacatgcttccaacatgcttggggagctacggacttccatgttatctcca
aagagctattacgagctctacatggcaatttctgatgagctacactacttggaagtctac
ctgacagatgaatttgccaaaggcaggaaggtggcagacctttatgagctagtacagtat
gctggaaatattattccaagactgtatctgctgataacagtaggtgttgtctatgtcaag
tcatttccacagtccaggaaagatattttgaaagacctggtggagatgtgccgtggagtg
cagcatcctcttagaggcctctttcttagaaactatctcctgcagtgtaccaggaatatc
ttaccagatgaaggcgagcaagcagatgaagaaaccactggagacatcagtgactcaatg
gattttgtgctgctgaactttgctgagatgaacaaactctgggtgcgaatgcagcaccaa
ggccacagtcgggacagagagaaaagggagcgtgagaggcaggagctgaggatccttgtg
ggaacaaacctggttcgcctcagtcagctggaaggggttaatgtggagcgatacaagcag
attgttctgcctggaatactggagcaagttgtgaactgtagagatgctttagctcaggag
tacctcatggagtgcatcatacaggttttcccagatgaatttcacctccaaaccctgaac
ccatttctcagagcctgtgctgagctgcaccaaaatgtgaatgtgaaaaatataattatt
gctttaattgacaggttagctttatttgcacatcgtgaagatggacctggtatcccagca
gatatcaaactgtttgatatcttttcacagcaggttgctactgttatacagtctcggcag
gatatgccctcagaggatgtggtgtctttgcaagtttctctcattaacctggctatgaaa
tgctacccagaccgtgtggactatgttgacaaggtgttggagactactgtggaaatattc
aacaaacttaatctggaacatattgcaacaagcagtgctgtttcaaaggagctgactaga
cttttgaaaatcccagttgacacttacaacaatatcctgacagttctgaaactaaagcat
tttcacccactctttgaatactttgattacgagtccaggaagagcatgagttgttacgtg
cttagcaatgtattggattataacacagaaattgtgtcccaagaacaggttgatgctatc
atgaatttggtatccacactgatccaggatcaaccagatcaacctgccgaagatcctgac
cctgaggactttgctgatgagcaaagtcttgtgggaagatttattcatctgctgcgttct
gatgaccctgaccaacagtacctgatcctcaacactgcccggaagcactttggggcaggg
gggaaccagcgcattcgtttcacgctgccacccttggtttttgctgcctaccagctcgct
tttcgctacaaagagaactccaaagtggatgacaaatgggaaaagaagtgccagaagatc
ttttcctttgctcatcagaccatcagtgctctgatcaaagcagagctggcagagctgcct
ctccgactcttcctgcagggagcactggctgcaggagaaattggctttgagaatcatgaa
actgtggcctatgagttcatgtctcaggccttctctctatatgaagatgaaatcagtgac
tcaaaagcacagctggctgcaatcaccttgataattgggacatttgagaggatgaagtgc
ttcagtgaggagaaccatgagcctttgaggacacagtgtgcactggcagcctccaaactc
ctgaagaagccagaccagtgccgagctgtgagcacttgtgcccatctgttctggtctggc
cgaaacactgacaagaacggagaggagcttcatggaggaaaaagagtaatggaatgccta
aagaaggctctgaagatagctaatcagtgcatggacccttctctgcaagtccagcttttc
atagaaattctgaatagatatatctatttttatgaaaaggaaaatgaggcggtgacaatt
caggttttgaatcagcttatacagaagatcagagaagatctcccaaaccttgaatctact
gaagaaacagaacaaattaacaaacactttcacaacacactggagcacttgcgtctgagg
agggaatcaccagagtctgaggggccaatttatgaaggtcttgttctttag
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