Parus major (Great Tit): 107209921
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Entry
107209921 CDS
T04864
Symbol
GARRE1
Name
(RefSeq) uncharacterized protein KIAA0355 homolog isoform X1
KO
K26671
granule associated Rac and RHOG effector protein 1
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmaj03019
]
107209921 (GARRE1)
Messenger RNA biogenesis [BR:
pmaj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107209921 (GARRE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4745
Stu2_CTS
Motif
Other DBs
NCBI-GeneID:
107209921
NCBI-ProteinID:
XP_015495601
Ensembl:
ENSPMJG00000003698
LinkDB
All DBs
Position
11:complement(18386357..18441817)
Genome browser
AA seq
1055 aa
AA seq
DB search
MYCCSAQESKMDYKRRFLLGGSKQKVQQHQQYQMPELGRTLSAPLASATPSTPLVSPAAA
GGCSHPASHTTPIADIQQGISKYLDALNVFCRTSTFLTDLFSSVFRNSHYSKAAMQLKDV
QEHVMEAASRLTAAIKPEIAKMLMELSAGAANFKDQKEFSLQDIEVLGRCFLTVMQVHFQ
FLSQALQKVQPVAHSCFAEAVAQERKNVSGTGASNISPTNELEDAIRSWRGAAEATSRLR
ERGCDGCLAGIEVQQLFCSQSVAIPEHQLKELNMKIDSALQAYKVALESLGHCEYAMKAG
FHLNPKAIEASLQGCCSEAEAQQTGRRQTPPQPIQCELPTVPVQIGSHFLKGISFNESAA
ENLKLKTHTMLQLIKEAGCHNGLTPRDDSPVTEVLNQVCPSTWRGACKTAVQLLFGQAGL
VVVDTAQIENKEAYAPQISLEGSRIVVQVPSTWCLKEDPATMSLLQRSLDPEKTLGLVDV
LYTAVFDIHRWKEGREQALPCIQIQLQREISDFGSQADMPSGNGSKSSGGLQKTFSKLTS
RFTKKTSCTSTSNTGSYSIPNTPSKNVFISSSSEEKAKMPTNMDARLQNILNIGNFPRTA
DALQPVQSTNNQLVNGFLVERRDSFFKPDDGKDDKGMNLPTDQEMQDVIDFLSGFNMGKS
QQTSPMVKRRNSVASSTATEQKSGAVQQQPQSVSHTPLHPPQQGLSQQQSQKQQQQMQYY
QHLLQPIGPQQRVPAKWLSNSSQQQAPAVGAGLSHINQWNNPGFSDLSSDLYSLGLVSSY
MDNMMAEMLGQKPQGPRNNTWPNRDQTDGVFGMLGEILPFDPAVGSDPEFARYVAGVNQA
MQQKRQAQHVRRPSTTRGNWPLPDDPHKTWPFPEYFTEGDVTNSWSGTQGDSASSSDETS
SANGDSLFSMFSGPDLVAAVKQRRKHSSGEQEPSTLPSPPLLSAADDRSQDNKTKTWPPK
APWQHTSSVPSTLPSQSTSLYPMSSPMSQWSDTMQMLQSPMWASDCAPAAGISSSFAYAQ
QQQQSQQASQHKQINKGFKSFPVKHERRPSYLHQY
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgtattgctgcagtgcacaagaaagcaaaatggactataagcggcgctttttgcttggc
gggtccaagcagaaagtgcagcaacaccagcagtatcaaatgcccgagctgggcaggacc
ctgagcgccccgctggcatcggccacccccagcacccccctggtgtccccggctgctgcg
ggcggctgctcccaccccgcctcccacacgactcccatcgcagacatccagcagggaatc
tccaaatacctggatgccctcaacgtcttttgccgtacgagcactttcctcacggacctt
ttcagcagcgtgttcaggaactcgcactactctaaggcagctatgcaactgaaagacgtg
caggaacatgtcatggaagcggccagccgactcacagcagcaataaaaccagaaatagca
aaaatgctgatggaactgagtgcaggagctgcaaacttcaaagatcaaaaagagttcagc
ctacaagacattgaggtacttgggcgatgtttcctgacagtgatgcaggtccacttccaa
ttcctgtcacaagctctgcagaaagtccagcctgtggcacactcctgctttgctgaagct
gtggctcaggagaggaagaacgttagtgggactggagcctcaaatataagccccacaaat
gagctggaagatgcaataagatcatggagaggagcagcagaggccacatctcgactgcga
gaaagaggctgtgatggatgtttggcaggaattgaagttcagcaacttttctgctcacag
agtgtggccatccctgaacatcagctcaaagagctaaacatgaaaattgacagtgctttg
caggcttacaaagtggccctggagagcttgggtcattgtgaatatgcaatgaaggctggc
ttccacttgaacccaaaagcgattgaagcaagtcttcagggctgttgcagtgaagctgaa
gcccagcagacaggaaggagacagactccacctcagcccattcagtgtgagctgcccact
gtccctgtccagatcgggtcccattttctgaaaggaatctccttcaatgagtctgcagca
gaaaacctgaagctgaaaacgcacacaatgctgcagttgatcaaggaagctggatgccat
aatggactcacaccccgtgatgactctcctgtgactgaagtactgaaccaggtctgccct
tccacgtggagaggagcctgcaaaactgctgtgcagctcttgtttggccaggctggactg
gtggttgtggacacagcacagattgaaaataaagaagcctatgctcctcagataagttta
gaaggatcaagaattgtggtgcaagttccatcaacttggtgtctgaaagaagatccagca
acaatgtctttgctacagaggagtctggatccggagaagactttggggctggtagatgtg
ctctatactgctgtgtttgatatacacaggtggaaggaaggaagggagcaagctttgcct
tgtattcagatccagttacagcgtgaaatctcagactttgggagccaagctgacatgccg
tcggggaacggaagcaaatcttcagggggtctgcaaaagacattctcaaaactgacttca
cggtttacaaaaaaaacttcctgcaccagtacaagtaacacaggaagttactcaatcccc
aatacaccttccaaaaatgtcttcataagttccagctcagaggagaaagctaaaatgccc
actaacatggatgcacggttgcagaacatcctgaacattggtaacttccctcggaccgca
gatgccctgcagccggttcagagcacaaataaccagctcgtcaatgggtttctagtggaa
agacgggacagcttcttcaaaccagatgatggcaaggatgacaaaggtatgaatttacca
actgaccaagaaatgcaggatgttatagatttcttgtctggttttaacatgggcaaatcc
cagcagacttctccgatggtgaaaagaaggaactctgttgcatcctctacagcaacagaa
caaaagtcaggagcagttcaacagcagccgcagtctgtgtctcacaccccgctgcatcct
cctcagcaaggcttgtcccagcagcagtcccaaaaacagcagcagcaaatgcagtattat
caacacttgcttcaacctattggaccacagcaacgtgtacctgccaaatggctcagtaat
tcttcacagcagcaagccccggctgttggagctggattgtctcatataaatcagtggaac
aatcctggtttttcagatttaagctctgatttgtacagcctgggtcttgtgagcagctat
atggacaatatgatggcagaaatgttaggacagaaaccacaaggacctagaaacaacaca
tggccaaatcgtgaccaaactgatggagtgtttgggatgttgggagaaatcctgcctttt
gaccctgcagttggctctgatccagagtttgcccgctatgttgctggggtgaaccaggct
atgcaacagaagaggcaagcacagcacgtccgtcgtccaagcaccacgcgtggcaactgg
cctcttcctgatgatcctcataaaacctggccctttcctgagtatttcacagagggtgat
gtgacaaacagctggtctggtactcaaggagactctgccagctcaagtgatgagacctcc
tcagctaacggagacagtttgttctccatgttctcagggccagaccttgttgctgctgta
aagcagaggagaaaacacagcagtggtgaacaggaacccagcacactgccatcgcctcct
cttctctctgcagcagatgaccgcagtcaggataacaagaccaaaacctggcctcccaag
gccccgtggcagcacacatcctctgtgcccagcacgctgcccagccagagcacgtccctg
taccccatgagcagccccatgagccagtggagtgacaccatgcagatgctccagtcgccc
atgtgggccagcgactgcgccccggcagccggcatctcctccagcttcgcctacgcgcag
cagcagcagcaatcccaacaggcttcccagcacaaacagatcaacaagggcttcaaatct
ttcccagtaaagcacgaacgcagaccatcttacctgcaccagtactaa
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