Parus major (Great Tit): 107209936
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Entry
107209936 CDS
T04864
Symbol
CYLD
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj04217
Necroptosis
pmaj04622
RIG-I-like receptor signaling pathway
pmaj04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
107209936 (CYLD)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
107209936 (CYLD)
04625 C-type lectin receptor signaling pathway
107209936 (CYLD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pmaj01002
]
107209936 (CYLD)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmaj04121
]
107209936 (CYLD)
Enzymes [BR:
pmaj01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107209936 (CYLD)
Peptidases and inhibitors [BR:
pmaj01002
]
Cysteine peptidases
Family C67
107209936 (CYLD)
Ubiquitin system [BR:
pmaj04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107209936 (CYLD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
107209936
NCBI-ProteinID:
XP_018863577
Ensembl:
ENSPMJG00000002241
LinkDB
All DBs
Position
11:complement(11865407..11887944)
Genome browser
AA seq
953 aa
AA seq
DB search
MNSGLWSQEKASSSYWEERIFYLLLQECSVIDKQTQKLLKVPKGSIGQFFQDRSSVAHSR
NIPCKGKKLQIGLKILEQPHAILFVDEKDVIEINEKLAELLLAITNCEERYSLFKSKSRL
AKGVQIDIGSPVRVQLRSGEEKYPGVVRFRGPLMQERSLTGIYFGVELLEEGRGQGFTDG
QYQGKQLFRCDEDCGVFVALDKLELVEDDDNELESDYAAPVDAMQVELPPLEINSRVSLK
IGESIEYGTVIFCDVLPGNESLGYVVGVDMDNPIGNWDGRYNGIQLCSFASVESTLLLHI
NDVIPETVSQDRRPPKLAYTSRSGDKSLFNHSKPKAIGSTSEPGNRSRSEVFYTLNGSSV
DSQPQTKTKSPWYIDEAAEDPSKSLTDSSSGFGHSSPPLQPPLTNSVSTENRFHSLPFSL
TKTTSTNGTIGHSPLSLSVQSVMGDVNTTATQESPSAASPIGNSHGLEAGSLAEVKENPP
FYGVIRWIGQPPGVNEVLAGLELEDECAGCTDGTFKGTRYFTCAPKKALFVKLKSCRPDS
RFASLQPVSNQIERCNSLAFGGYLSEVVEENTPPKMEKEGLETMIGKKKGIQGHYNSCYL
DSTLFCLFSFSSVLDTVLLRPKEMNDVEYYSETQELLRTEIVNPLRIYGYVCATKIMKLR
KILEKVEAASGFTSEEKDPEEFLNILFHHILRVEPLLKIRSPGQKVQDCYFYQIFMDKNE
KVGVPTIQQLLEWSFINSNLKFAEAPSCLIIQMPRFGKDFKMFNKIFPSLELNITDLLED
TPRQCRICRGLAMYECRECYEDTDISAGKIKQFCKTCNTQVHLHPKRQSHKFNPLSLPKD
LPDWDWRHGCVPSQKMELFAVLCIETSHYVAFVKYGRDDSAWLFFDSMADRDGGQNGFNI
PQVTPCPEVGEYLKMSLEELHSLDSRKIQGCARRLLCDAYMCMYQSPTMSLYK
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgaattcaggcttatggagtcaagaaaaagcaagttcatcctactgggaagagcggatt
ttttacttgcttctccaagaatgcagtgtcatagacaagcagactcaaaagctcttgaaa
gtacccaaaggtagcattgggcagttttttcaagaccgttcttctgtggcgcactccaga
aatattccatgtaaaggcaagaaactgcagattggattaaagattctggaacaaccacat
gcaatcctgtttgtggatgagaaggatgttatagaaataaatgaaaaactagctgagttg
cttctggctattactaactgtgaggaaagatacagtttgtttaaaagcaaaagcaggtta
gctaaaggcgtccagatagatattggctcacctgttagagtacagctgagatcaggagaa
gagaaataccctggagttgttcgcttcagaggacccttaatgcaagaaaggtccctaaca
gggatatactttggagtagagttgctggaagaaggtcgtggtcagggctttactgatgga
cagtaccaaggcaagcagcttttcagatgtgatgaggattgtggggtttttgttgctttg
gacaaactggagctggtggaagatgatgacaatgaactggaaagtgactatgcagctcca
gttgacgcaatgcaggtagaacttcctcctctggagatcaactccagggtttctctgaag
ataggagagagtatagagtatgggacagttatattctgtgatgtcttaccaggaaacgaa
agtttaggatacgttgttggagtggacatggataatccgattggaaactgggatggaaga
tataatggaatacagctgtgcagttttgcaagtgttgaaagtacacttcttttgcatatc
aatgatgttattccagagactgtgtcacaggacaggagacctcccaagcttgcctatacc
tcaagaagtggtgacaaaagcttgttcaatcatagtaagccaaaggcgataggatctacc
tctgaacctggaaatagaagcagatctgaagtcttctacacattaaatggctcatcagtt
gactctcagcctcaaacaaaaacaaaatccccgtggtatattgatgaagctgctgaagac
ccttcaaagtcacttactgattcatcttctggatttgggcattcttcaccaccactgcaa
ccacctttaacaaactctgtgtctacagaaaacagatttcactccctcccctttagcttg
acaaaaacaacaagtactaatggtactattggacatagtcctctctctttatctgttcag
tctgtcatgggtgatgtgaataccacagctacccaagaaagtccatcagcagcaagccca
attggaaactcacatggtcttgaagcaggttccttggctgaagttaaagaaaatcctcct
ttctatggagtaatccgctggattggccagccccctggagtaaatgaagtattagcagga
ctggaactggaagatgaatgtgcaggctgtacagatggaacatttaaaggaactcgatat
ttcacatgtgctccaaagaaagctctttttgttaaactcaaaagctgcaggccagattcc
aggtttgcctcactccagcctgtttccaaccagatcgagcgctgcaactctctagccttt
ggaggttacttaagtgaagtggtagaagaaaacactcctccaaaaatggaaaaagaaggt
ttagagacaatgattggaaagaagaaaggtatccaggggcattacaactcctgttactta
gactccaccttattctgcctgttttcttttagctctgttttggacactgtgctactcaga
cctaaagaaatgaatgatgtagagtattatagtgagactcaggagctgctgcggacagag
attgtgaatcctctgagaatatatggatatgtatgtgctacaaaaataatgaaactgagg
aaaatacttgaaaaagttgaggctgcatcaggattcacttcagaggaaaaagatccagaa
gaatttctgaatattttatttcatcatattctaagagttgagccactgttgaaaataaga
tcaccaggtcagaaagtacaagactgttacttctatcaaatttttatggacaaaaatgag
aaagttggagtcccaacaattcagcagttactagagtggtcattcatcaacagcaacttg
aagtttgcagaggcaccctcttgcctgattatccagatgccccggtttggaaaagacttc
aaaatgttcaataaaatttttccttccttggaattaaatataacagacttacttgaagac
actcccaggcagtgccggatctgcagagggctcgctatgtacgagtgcagggagtgttat
gaagacactgatatttctgctggcaaaatcaagcagttctgtaaaacgtgcaatacacag
gttcatcttcatcccaagagacagagtcataaattcaatccattgtcacttcctaaggat
ctgccagactgggactggcggcacggctgcgtgccctcgcagaagatggagctgtttgca
gtgctgtgcatcgagaccagccactacgtggccttcgtcaagtacggcagggatgactct
gcctggctcttctttgacagcatggcagatcgggatggaggtcagaatggcttcaacatt
ccacaagttacgccatgtccagaagttggtgaatacctgaagatgtccctagaagaattg
cactcactggattccaggaaaatccaaggttgtgcacgaagactgctttgtgatgcttac
atgtgcatgtatcaaagtccaacaatgagtttatacaaatga
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