Parus major (Great Tit): 107209954
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Entry
107209954 CDS
T04864
Symbol
CDH13
Name
(RefSeq) cadherin-13 isoform X1
KO
K06808
cadherin 13, H-cadherin
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmaj03036
]
107209954 (CDH13)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pmaj04515
]
107209954 (CDH13)
Chromosome and associated proteins [BR:
pmaj03036
]
Eukaryotic type
Centrosome formation proteins
Other centriole associated proteins
107209954 (CDH13)
Cell adhesion molecules [BR:
pmaj04515
]
Cadherins
Major cadherins
107209954 (CDH13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_pro
Cadherin_3
Cadherin_4
Big_9
BACON_2
Motif
Other DBs
NCBI-GeneID:
107209954
NCBI-ProteinID:
XP_015495659
Ensembl:
ENSPMJG00000013971
LinkDB
All DBs
Position
11:complement(3633467..4059720)
Genome browser
AA seq
717 aa
AA seq
DB search
MQHKTQLTLSFLLSQVLLLACAEDLECVPGFQQKVFYIEKPSEFTEDQLVLNLKFDDCKG
NNKLNFEVSNPDFTVELDGNLVALKNVSEVGRALFVHARSEHAEDMAEIFILEANEKRGA
LKEILKLEGNLGIPRQKRAILATPILIPENQRPPFPRSVGKVIRSEGTDGVKFRLSGKGV
DQDPKGIFRINEMNGDVSVTRSLDREAIANYELEVEVVDMNGKTIDGPVRLDISVIDQND
NRPMFKEGPYVGHVMEGSATGTTVMRMAAFDADDASTDNALLRYNILKQTPTKPSPNMFY
IDPEKGDIVTVVSPTLLDRETMESPKYELVIEAKDMGGMDVGLTGTATATILIDDKNDHA
PEFTKKEFQATVKEGVTGVIVNLTVGDRDDPATGAWRAVYSIINGNPGQSFEIHTNPQTN
EGMLSVVKPLDYEISAFHTLLIKVENEDPLIPDIAYGPSSTATVQITVEDVNEGPVFHPN
PMAVTKQENIPIGSVVLTVNATDPDTLQHQTIRYSVYKDPAGWLEINPTNGTVGTTAVLD
RESPFVQNNVYTALFLAIDSGNPPATGTGTLHITLEDVNDNVPSLYPTLAKVCDDAKDLR
VVVLGASDKDLHPNTDPFKFELSKQSGPEKLWRINRLNNTHAQVILLQNLKKANYNIPIS
VTDSGKPPLTNTTELRLQVCTCKKSKMDCSASDALHISLTLILLSLLSLFCKSFAEL
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgcagcacaaaactcaacttactctgtcttttctgctgtcccaggttctgctgcttgca
tgtgcagaagatttagaatgtgtccctggattccagcagaaggttttttatatagaaaag
ccgtctgaattcacagaggaccagctggttctgaacctgaaatttgatgactgcaagggg
aacaacaaattgaactttgaagtttctaacccagactttacagtggaacttgatgggaat
ttggttgcactcaagaatgtatcagaagttggcagagccttgttcgtccacgcgcggtcg
gagcacgccgaggacatggcagaaatctttattcttgaagcaaatgagaaacgtggtgca
ttaaaggaaatcttaaaactagaaggcaaccttggaattccaagacaaaaaagggctatt
ttggcaactcccatattaattcctgaaaatcaaagacctccgtttcccagatcagtcggc
aaggtcatcagaagtgaagggacagacggagtaaaattccggctctctggaaagggagta
gatcaagacccaaaaggaatttttagaatcaatgaaatgaacggggacgtctccgtgacc
cgaagccttgatcgagaagcaattgccaattacgagctggaagttgaggtggtggatatg
aatgggaaaaccattgacggcccagtgcgcctggacatctcggtcatcgatcagaacgac
aacaggcccatgttcaaggagggcccctatgttggtcatgtcatggagggatctgccaca
ggaaccaccgtgatgcgcatggcagcgtttgacgccgatgacgccagcacggacaacgct
ctcctgcgctacaacatcctcaagcagacccccaccaaaccctccccaaacatgttctac
atcgacccagagaagggagacattgtcacagtggtgtcccccacgctgctggaccgggag
actatggaaagcccaaagtatgagctggttatagaagccaaggatatgggtgggatggat
gtgggactgacaggcacagccactgccaccattcttatcgatgacaaaaatgaccacgca
ccagaattcaccaagaaggagttccaggccacagtgaaggagggggtcacaggtgtaata
gtgaacttaactgtgggtgaccgggacgaccccgccaccggggcgtggagagccgtctac
tccatcattaacgggaacccagggcagagctttgagatccacaccaacccccagactaat
gagggaatgctctctgttgtcaagcctttagactacgagatctcggcctttcacacgctg
ctgatcaaagtggaaaacgaagacccgctgatcccagacatcgcctacggccccagctcc
acagccaccgtccagatcactgtggaggacgtcaacgaaggccccgttttccacccaaac
cccatggcagtgaccaagcaggagaacatccccattggcagcgtggtgctcacggtgaac
gccaccgaccccgacaccttgcagcaccagaccatcaggtactcagtgtacaaggaccca
gcagggtggctggaaatcaaccccaccaatggcacggttggcaccacggcagtgctggac
agggaatctcccttcgtgcagaacaacgtctacactgctctgttcctggccatcgacagt
ggtaaccctcctgctacgggtactggaactttgcacatcaccttggaggatgtcaatgac
aacgtcccatccctttatccaacactggcaaaagtttgtgatgatgcaaaagatctcagg
gtagtggttctaggagcatcagataaagaccttcaccccaacacagacccattcaaattt
gaactcagcaagcaatctggcccagaaaagttgtggagaatcaacaggcttaacaatact
catgcccaggtcatcctgcttcagaacctgaaaaaggccaattacaacatccccatctca
gtgacagattctggaaaacctcctctgaccaacaccacagaactgagattacaagtgtgt
acctgcaagaaatccaaaatggactgcagtgcatctgatgctctccacatcagcctgacc
ctaatcctcctttcactcctcagtttattttgtaagtcttttgctgagctgtaa
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