Parus major (Great Tit): 107209970
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Entry
107209970 CDS
T04864
Symbol
EXOSC6
Name
(RefSeq) exosome complex component MTR3
KO
K12587
exosome complex component MTR3
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107209970 (EXOSC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmaj03019
]
107209970 (EXOSC6)
Messenger RNA biogenesis [BR:
pmaj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
107209970 (EXOSC6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
107209970
NCBI-ProteinID:
XP_015495695
Ensembl:
ENSPMJG00000014224
LinkDB
All DBs
Position
11:7029602..7031270
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AA seq
307 aa
AA seq
DB search
MGWGGIPLPLTACARLLPGPAPSPPARRVPPAMPLDHRRLRGPEESQPPALWAATAAEDE
EDEEGAGAAPRDPCALRPLFARAGLLSQAQGSAYVELGSGTKVLCAAWGPREAAEPGPGR
LLCEFRRAPFAGRGARGRPGAAAEREAAAALREALEPAVRLGRYPRARLAVSALLLQDGG
SALAAAVSAAALALADAGVEMYDLAVGCALCRPAAPAASWMLQPAEPEERRAAARLTLAL
LPALNQVSAVLGGGRGGPPEDWAQALRLGLDGCHRQYPVLRQSLLRAAQRRDAAAAATAT
AAAATSA
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgggatggggtgggatcccgctgccactcacagcctgtgcccgcctccttcccgggccc
gccccatctccgcccgctcgccgtgtcccgccggccatgccgctggatcaccgccgcctg
cgcggcccggaggagtcgcagccgccggcgctgtgggcagcgaccgcggccgaggatgag
gaggacgaggagggcgcgggggcggcgccgcgggacccctgtgccctgcggccgctgttc
gcgagggccgggctgctgagccaggcgcagggctcggcctacgtggagctgggcagcggc
accaaggtgctctgcgccgcctggggcccgcgggaggcggccgagcccggcccgggccgg
ctgctctgcgagttccgccgggcgcccttcgcggggcgtggggcgcggggccggccgggc
gcggcggcggagcgggaggcggcggcggcgctgcgggaggcgctggagccggcggtgcgg
ctgggccgctacccgcgggcccgcctggccgtcagcgcgctgctgctgcaggacgggggc
tcggcgctggccgccgccgtcagcgccgccgccctggctctggcggacgcgggtgtggag
atgtacgacctggccgtgggctgcgcgctgtgccggccggccgcgcccgccgcctcatgg
atgctgcagcccgccgagcccgaggagcgccgcgccgccgcccgcctcacgctggccctg
ctgcccgccctcaaccaggtgtcggccgtgctgggcggcggccggggcggcccgcccgag
gactgggcgcaagccttgcggctcggtctcgatggctgccaccggcagtacccggtgctg
cggcagagcctgctgcgggccgcccagcgccgcgatgccgccgccgctgccaccgccact
gccgccgccgccaccagtgcctga
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