KEGG   Parus major (Great Tit): 107209970
Entry
107209970         CDS       T04864                                 
Symbol
EXOSC6
Name
(RefSeq) exosome complex component MTR3
  KO
K12587  exosome complex component MTR3
Organism
pmaj  Parus major (Great Tit)
Pathway
pmaj03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pmaj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    107209970 (EXOSC6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmaj03019]
    107209970 (EXOSC6)
Messenger RNA biogenesis [BR:pmaj03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     107209970 (EXOSC6)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 107209970
NCBI-ProteinID: XP_015495695
Ensembl: ENSPMJG00000014224
LinkDB
Position
11:7029602..7031270
AA seq 307 aa
MGWGGIPLPLTACARLLPGPAPSPPARRVPPAMPLDHRRLRGPEESQPPALWAATAAEDE
EDEEGAGAAPRDPCALRPLFARAGLLSQAQGSAYVELGSGTKVLCAAWGPREAAEPGPGR
LLCEFRRAPFAGRGARGRPGAAAEREAAAALREALEPAVRLGRYPRARLAVSALLLQDGG
SALAAAVSAAALALADAGVEMYDLAVGCALCRPAAPAASWMLQPAEPEERRAAARLTLAL
LPALNQVSAVLGGGRGGPPEDWAQALRLGLDGCHRQYPVLRQSLLRAAQRRDAAAAATAT
AAAATSA
NT seq 924 nt   +upstreamnt  +downstreamnt
atgggatggggtgggatcccgctgccactcacagcctgtgcccgcctccttcccgggccc
gccccatctccgcccgctcgccgtgtcccgccggccatgccgctggatcaccgccgcctg
cgcggcccggaggagtcgcagccgccggcgctgtgggcagcgaccgcggccgaggatgag
gaggacgaggagggcgcgggggcggcgccgcgggacccctgtgccctgcggccgctgttc
gcgagggccgggctgctgagccaggcgcagggctcggcctacgtggagctgggcagcggc
accaaggtgctctgcgccgcctggggcccgcgggaggcggccgagcccggcccgggccgg
ctgctctgcgagttccgccgggcgcccttcgcggggcgtggggcgcggggccggccgggc
gcggcggcggagcgggaggcggcggcggcgctgcgggaggcgctggagccggcggtgcgg
ctgggccgctacccgcgggcccgcctggccgtcagcgcgctgctgctgcaggacgggggc
tcggcgctggccgccgccgtcagcgccgccgccctggctctggcggacgcgggtgtggag
atgtacgacctggccgtgggctgcgcgctgtgccggccggccgcgcccgccgcctcatgg
atgctgcagcccgccgagcccgaggagcgccgcgccgccgcccgcctcacgctggccctg
ctgcccgccctcaaccaggtgtcggccgtgctgggcggcggccggggcggcccgcccgag
gactgggcgcaagccttgcggctcggtctcgatggctgccaccggcagtacccggtgctg
cggcagagcctgctgcgggccgcccagcgccgcgatgccgccgccgctgccaccgccact
gccgccgccgccaccagtgcctga

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