Parus major (Great Tit): 107210033
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Entry
107210033 CDS
T04864
Symbol
UTP4
Name
(RefSeq) U3 small nucleolar RNA-associated protein 4 homolog
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107210033 (UTP4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmaj03009
]
107210033 (UTP4)
Ribosome biogenesis [BR:
pmaj03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
107210033 (UTP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_EML_2
WD40
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
ANAPC4_WD40
WDR55
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_NUP159_NUP214
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
Beta-prop_ACSF4
Ge1_WD40
DUF7165
Motif
Other DBs
NCBI-GeneID:
107210033
NCBI-ProteinID:
XP_015495851
Ensembl:
ENSPMJG00000013772
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All DBs
Position
11:complement(936437..941145)
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AA seq
687 aa
AA seq
DB search
MGEFEVHRVRFFGLVPAGVRCLACHPRGARLALARTDGTVEVYNFAANYFQEKVIPGHEA
RSVESLCWAAGERLFGAGLGGDITEFDLCGLSAARGVDGGGGPIWSMVASGTGTQLAIGC
EDGSVKIFQVVPGGGIQFERNLDRRKGRVLCLSWHRSGTYIVAGSIDFFRVIDVASGQTV
QRIMVNHQVEKAKPECVVWAIALLSSGTVVSADSFGRVQFWDWEQGTLAESHTVSTSAAL
SLAVSEKEDSIVVGTSTGATYQLQLLPVKLGGLEKCWVRTKPFQFHSHDVRAVAHSSTAL
ISGGLDAQLVIRPLMEKVQKKGYDAVLRKFTFPHRRLVSCARKARLLLFQFSQYLELWRL
GSTEETGKDGEVLPPCRMPEHLVQLKSKGPEHIYCSCVSPCGTWVGYSTASRFQLYRVHC
DGDGVSLRKVPKVPKLLPPAYQLQFSADSESLFVASARGSVHVFQLLEPGGCKHLHTLQP
PSGCSEAVYLLAPSADGHWLAAVSGDWAIHIYNLKCFQHHCVVPAYSCAVSALAIHPSTN
NLVIAYSDQQLFEFSIPEKQYTSWSRAVQSRGLHRTWLERDSPITHITFNPKNPAHILLH
DTYLLCILDKSLPLPDDSTLLMNQSTLKQLPETARKRQLHAFKICKKFQPLLFMDLLDEN
CLVVVERPIMDFKTQLPLAVQQKKFGT
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgggcgagttcgaggtgcaccgggtgcggttcttcgggctggtgccggcgggcgtgcgc
tgcctcgcctgccacccccgcggagcccgcctggccctggcccgcaccgacggcaccgtc
gaggtgtacaacttcgccgccaactacttccaggagaaggtgatcccggggcacgaggcg
cgctcggtggagtcgctgtgctgggcggccggggagcggctcttcggggccgggctcggc
ggggacatcaccgagttcgacctgtgcgggctgagcgcggctcgaggcgtcgatggcggc
gggggacccatctggagcatggtggccagcggcaccggcacccagctggcgatcggctgc
gaggacggatccgttaagatcttccaagtcgttcctggtggggggatccagtttgagcgg
aacctggacaggcggaaaggccgtgtcctgtgcctgtcctggcaccgctcgggcacttac
atcgtggctggctccatcgacttcttccgcgtcatcgacgtcgcttcaggccagacggtg
cagaggatcatggtgaaccaccaggtggagaaggccaagcccgagtgcgtggtgtgggcc
atcgccctcctctccagcggcaccgtggtcagtgccgactcctttgggagggtgcagttc
tgggactgggagcagggcacgctggctgagtcccacaccgtcagcacctcggccgcgctc
tctctggctgtgtcagagaaggaggacagcatcgtcgtgggcacctcgaccggggccacc
taccagctgcagctgctgccggtgaagctgggcgggctggagaaatgctgggtgcggaca
aagcccttccagttccacagccacgacgtgcgggccgtggcgcacagctccaccgccctc
atctccgggggcctggatgcccagctggtgatccgcccgctgatggagaaggtgcagaag
aagggctacgacgcagtgctccgaaaattcaccttccctcaccgacgcctcgtctcctgt
gccaggaaagcccggctgctcctcttccagttctcccagtacctggagctctggagactt
ggctccactgaggagaccggaaaggacggcgaggtccttcccccgtgccggatgcccgag
catctcgtgcagctcaagagcaagggcccggagcacatctactgcagctgtgtctcaccc
tgcggcacctgggtcggctactccacggcctcccgcttccagctgtaccgcgtgcactgt
gacggggacggtgtcagcctcaggaaggtccccaaagtgcccaagctgctgcctccagca
taccagctccagttctctgctgactccgagagcctctttgtcgcctctgctcgaggatct
gtccacgtcttccagctgctggagccggggggctgcaaacacctgcacacactgcagcca
ccctcaggctgctccgaggccgtttacctgctggcgccgagtgcggacgggcactggctg
gcagccgtcagcggcgactgggccatccacatctacaacctcaaatgcttccagcatcac
tgcgtggtgcccgcctacagctgcgccgtatcggccctcgccatccaccccagcaccaac
aacctcgtcatcgcctactcggaccagcagctctttgagttcagcatccctgagaagcag
tacacgagctggagccgcgccgtgcagagccgggggctgcaccgcacctggctggagcgt
gactcgcccatcacacacatcaccttcaaccccaagaaccccgctcacatcctgctccac
gacacctacctgctctgcatcctcgacaagtccctgcccctgcccgacgacagcaccctc
ctgatgaaccagagcaccctgaaacagctcccagagacggccaggaagcggcagctccac
gccttcaagatctgcaagaagttccagccactgctcttcatggatctgctggacgagaac
tgcctggttgtggtggaacgacccatcatggacttcaaaacacagctgcctctggctgtc
caacagaagaaatttggcacctga
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