Parus major (Great Tit): 107210045
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Entry
107210045 CDS
T04864
Symbol
TDRD12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmaj03036
]
107210045 (TDRD12)
Enzymes [BR:
pmaj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
107210045 (TDRD12)
Chromosome and associated proteins [BR:
pmaj03036
]
Eukaryotic type
Gene silencing
piRNA pathway
107210045 (TDRD12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Helicase_C
ERCC3_RAD25_C
EF-hand_3
Motif
Other DBs
NCBI-GeneID:
107210045
NCBI-ProteinID:
XP_015495874
Ensembl:
ENSPMJG00000003450
LinkDB
All DBs
Position
11:15758022..15781299
Genome browser
AA seq
1250 aa
AA seq
DB search
MEVVVLKVEDPSCFWIAVKDYVPGVVSETVYENLNAEMKQFYNSYRDAAAIKQEEIEKGQ
VYVVFSEELKCWCRALVESVWCHVDGYQLGCFLVDYAKYCSVASENVRVLVGAFAKIPHR
AKKCRLHCTKPLTLHIDYCENTAKIGPAKKWDAAAIQHFRKLLDEATEVKATIQAVQDEV
LEVFLFVTIRDEKICINDDLVAKHFAHYKEGEGTAESSTDDSDSEVSLNAECVPVEFVGP
TFLARPKLPFGDSMSPHLEPGLASCNSALEKMSQRSHTVLNDNTVPVASMVPDVPSKEDK
AVQTERLPQFLNSNSLQTHRVEDDQQSFQNVGKEKNFVFLSKKIEPSSVLETAPLFDGLK
KELDSNKLSTCTFTESYCWPPLVWGFDVVAISHQGHDPLLYIPPVLTLLQLESDYQALPN
MSGPLALILCPGWKKAQLVFDLLKTYRKGCRCLHPMLIILGQNKDAARQVEIRGCEVVVT
TPYNLLRLLEHNTGLLCRLCHLVLDEIEVLFSDTTEQVFTILDRYKKATAQAQGNLPHQI
IAVGTQWNKHITPLIKEFMHDPHIVITVIEEAAIFGNVQQVVQPCMNSNRTAELLKILDF
TQRNLQKVLVFSDSVAEVEMIHKVLKSNSVVSLKKHKDSKCNADCVLERWRKMHSSGTQA
VLVLTDDCLQSLAITDATCVIHFSFPSPGVFGQRLQSMSDNFCSGIEDSAVDQEHMKAKS
VILLTENSSCHTPGILHYLKRAEAEIPEELYDLTARVLESDENEKFSRPLCASLKAFGIC
RNRTECPDRHQINLSIDMAQNIADEMIETPERVTILPLFIVHATNYFGRIVKKQKDQYTV
LAKEINDYFKLPGHRVSASTVEKSVFYGLCEGAICHRVQVVETPAKDEENVCKVTIKYID
EGRTSQVNSDQLLHLPAKFQNLPPQAVEIVVCRVKPIDNEVEWNPKVTDHINQKIKGKLH
HAKVMHTLGKTLWVDPMVGVTNLPTMKMWINEYNIRSEILSMGLGTDNPEHIGEIQKLCR
QIPVLDHAESLEHLRTRPETAVEKFGTSVQALLVRSTKEGTAGLEEASSPQETSIQENPT
ESANGSVTPPSNNVAQTKEAEDSTVHQQKGYHPQIKWFQDNVTVTLKVQILRAADSKCEF
SREKVAFSAYSEGKLYVADLDLYESVIAEKSTCVIKDTEAVILLVKEKKGMWCKLLKNKN
VHLSLDFEHWEESEDGRPFTVGSAKPGSYPPAGSEDWFESSEDSDTESDE
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atggaagttgtggtattaaaggttgaagatccaagttgcttttggattgctgtgaaagac
tacgtgccgggcgtagtcagtgaaactgtgtatgaaaacctgaatgctgaaatgaagcag
ttttataacagttacagagatgcagctgcaataaaacaagaggagatagaaaaaggccag
gtttatgtggttttcagtgaggaactcaagtgctggtgtagggcactggttgagtcagtg
tggtgccacgtagatggttaccagctcggatgtttccttgtggattatgccaagtactgt
tctgttgcatcagaaaacgttcgagttttagtaggagcatttgcaaagatcccacataga
gcaaagaagtgtcggctgcactgcacaaagccactgacactgcatattgactactgtgaa
aacactgccaaaataggaccagccaaaaaatgggacgctgctgctatccagcattttcga
aaacttcttgatgaggctaccgaggttaaagccacaatacaggcggtacaagatgaagtg
ttagaggtgtttctttttgtgactataagagatgaaaagatatgtattaatgatgatctg
gttgcgaagcactttgctcattacaaggaaggtgaagggactgcagagagttctacggat
gattctgacagtgaagtgtcgttaaatgctgagtgtgttccagtggagttcgttggtcct
acatttcttgccaggccgaaactgccctttggggactcgatgtcaccacatcttgagcca
ggtcttgctagttgtaattctgctcttgaaaagatgtcccaaaggtcgcacacagttcta
aatgacaatactgtccctgtggctagcatggttccagatgtaccttccaaggaagataaa
gcagttcaaacagagaggcttccacagttcttaaattccaattccctccagacacacaga
gttgaagatgaccagcagagttttcaaaatgttgggaaagaaaaaaactttgtgttcctg
agcaagaaaattgagccatcatcagttttggaaacagcaccactttttgatggtctgaaa
aaggaacttgattcgaacaagctttcaacctgtaccttcactgagtcctactgttggcca
ccattagtttggggatttgatgttgttgccatctcccatcagggacatgatcccttatta
tatattccaccagttcttacacttctgcagttggaaagtgactaccaagccttgccaaac
atgagtggaccactagcattgattttatgtcctggatggaagaaggcacaacttgttttt
gacctgctgaaaacatacaggaaaggctgcagatgccttcatccaatgctgataatcctt
gggcagaacaaggatgcagccagacaagtggaaatccgaggctgtgaagtagtagtgact
acaccatacaaccttctgagactgctggaacataacactgggttattgtgtaggctttgc
catcttgttcttgatgagatcgaggtgctgttctctgacactactgaacaggtattcact
atactggatcgttacaagaaagccactgctcaggcacaagggaatctaccacatcagatc
attgctgtgggaactcagtggaataagcacatcacacccttgataaaggagttcatgcat
gatcctcacattgtgataacagttatcgaagaagctgccatctttggaaatgtgcaacag
gtggtgcagccctgcatgaacagcaacagaactgctgagttactcaaaatcctggatttt
acccagaggaatcttcaaaaagtgctggtattcagtgactcagtagctgaagtagagatg
attcataaggtactgaagagcaactcagtagtttccttgaaaaagcataaagacagcaag
tgtaatgctgattgtgtcttggagaggtggagaaaaatgcacagttctggcactcaggct
gtgttagttttaacagatgactgcctgcagtccttggcaatcacagatgcaacttgtgtg
atccatttcagtttcccatctccaggagtctttgggcagcgcctgcaaagcatgagtgac
aacttctgctctgggatagaggattctgctgtagatcaggaacatatgaaagccaagtca
gtcattctgctgacagagaacagttcctgtcatacacctgggattctccactatttaaag
cgtgcagaagctgaaattccagaggaactctatgacttgactgccagggtgctggaatct
gatgaaaatgagaaattttcaaggcccctgtgtgcttctcttaaagcatttgggatctgc
aggaacagaacagagtgtccagatcgtcatcaaattaatttatcaatagacatggcccag
aatattgcagatgaaatgatagaaacacctgaacgtgtgacgatcctgcctctcttcatt
gtacatgcaacaaactactttggtcgaatagtcaagaaacaaaaggaccaatatacagtt
cttgctaaagaaataaatgattacttcaagctaccaggacatagggtttctgctagcact
gtggagaagtcagtgttttatgggttatgtgagggagccatttgccacagggttcaggtg
gtagagactccagcaaaagatgaagaaaatgtctgtaaggtcacaattaaatatatagat
gaaggcaggacaagtcaagtgaatagtgatcagctccttcacttacctgcaaagtttcag
aatctgccgcctcaggctgtggaaattgtagtttgtagagtaaaacccatagataatgaa
gttgaatggaatccaaaggtaactgatcacattaatcagaaaataaaaggaaaacttcat
catgcaaaagtgatgcataccttgggaaagacactttgggttgacccaatggttggggtt
accaatcttcccacaatgaagatgtggataaatgagtacaacattagatctgagattttg
tcgatgggtttgggaaccgacaatcctgaacacataggagaaattcagaagttgtgcaga
cagataccagttttggatcatgcagagagcttggaacatttacgcaccaggcctgagact
gctgttgaaaaatttggaacttcagtacaggctttgttagtaagaagcacaaaagagggc
acagctggtctagaggaggcatccagtccacaggagacatcgatacaggaaaatcctact
gaaagcgctaacggttctgtgactcctccaagcaataatgttgctcaaacaaaagaagca
gaagactctactgtgcatcagcagaaaggctatcatccacaaatcaagtggtttcaagat
aatgtgactgtgacactgaaggtacaaatactgagggcagctgacagtaaatgtgagttc
tcaagagagaaggtggctttcagtgcttattcagaaggcaaactctatgtggctgacctg
gacctgtatgagtcagtaattgcagagaagtctacatgtgtgattaaggatacagaggct
gtgattttactggtaaaagagaaaaaaggaatgtggtgcaaattactgaagaacaagaat
gttcacctgtccttagattttgaacattgggaagagtctgaagatggaaggccttttaca
gttggttctgcaaaacctggaagctaccctcctgcaggatctgaggactggtttgaatcc
tcagaagacagcgatacagaaagtgatgagtaa
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