Parus major (Great Tit): 107210407
Help
Entry
107210407 CDS
T04864
Symbol
CHL1
Name
(RefSeq) neural cell adhesion molecule L1-like protein isoform X1
KO
K06758
L1 cell adhesion molecule like protein
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pmaj04515
]
107210407 (CHL1)
Cell adhesion molecules [BR:
pmaj04515
]
Immunoglobulin superfamily
L1 family
107210407 (CHL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
ig
Ig_2
Bravo_FIGEY
V-set
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3_VIN3
C2-set_2
Ig_6
Glyco_transf_10
Motif
Other DBs
NCBI-GeneID:
107210407
NCBI-ProteinID:
XP_015496680
Ensembl:
ENSPMJG00000005688
LinkDB
All DBs
Position
12:17773620..17899963
Genome browser
AA seq
1225 aa
AA seq
DB search
MEMLLSTKGITICLFFFVLSLAAAIEIPLSVSQLPTITEQSHTQVAYPFDEDFTIKCEAR
GNPQPTFNWTKDGKPFDLSSDPRIVSSNNSGTFVIQNRGIINNFQGKYRCFASNVLGTAM
SEEIELIVPSVPKFPKEKIEPLDVEHGDSVILHCNPPKGIPPLHIYWMNIDLQHIPQDER
VSMSLKGDLYFANVEESDSRSDYCCFAAFPRLRTIVQKMPMTLKVSRLKHANDSGSPNAA
VTKANFIKERKPKLLIPPESAGSSSSVTVIKGGVLLLECIAEGLPTPHLSWVKVMGSMPK
DEPETENFGKTLKIDQVTAADEGTYQCTASNPMGSASHKFHVHVEEPPQWLKKPEGGVYS
VGTNLVLLCEAIGNPEPSIQWKLNGMPIDGRTFRGRISTREISLTNLQLQDSAVFQCEAT
NKHGTILASANVNVLNIAPLILTPDEENYATVVGYSAFLHCDIFASPAADVRWTKDDSIE
PLSTFRYELNKNGTLEIRDTKKEDSGSYACWAANSVGKRAITANLDIRDATKLVVTPKSP
RVLKSHSILLKCQAEYDSHLKHSFKLSWRKDGDELPVNSTEGGRVILDRDTLFISSVLLE
DQGVYTCVASTALDAAEAEAQLIVLDVPDPPEDLQLSENQNRSVRLSWKAGASHNSPVNE
SIIEFEENRWEPGRWQELSRVPGNDTTALLSLAPYVNYQFRVVSVNAVGRSQPSKPSLRY
ATPPAAPDKNPENIRVEASEPNEMVMKWEPLKPVERNGPGLEYKVSWRQRGVESDWNEEL
VKKHSLSVRNVPTFVPYEIKVQAVNNLGSGPEPNVTIGYSGEDVPDAAPSGVSVEVVNST
LVKVFWFGIPRDRVRGHLKGYKVNWWKTKNMLDGKRHHPEKHFLTFVGDRNYGMIPGLEP
FSEFRLTVLAFNSRGDGPESSPVVFETPEGVPEQPRFLRILNFDKDSVTLSWGLPKKANG
HLTGYVLQYQIINETHEVGAVSEVSVTNRSVLSWRLAGLSPSTKYKFYIKACTAKGCGKA
ATEEGLTLAQGSKGSGRISDAVKPTPKFQPSEALEPGTEYTIRLVTKNWVDNNSIFEDVI
ETRGRAYAGIYEGISTQGWFIGLMCAIALLTLLLLTICFVRRNKGGKYSVKEKEDLHPDP
EAQSIKDEIFGEYSDSDEKPLKGSLQSLNGDIKATGSADSLVDYGEGEHGMFNEDGSFIG
AYSGSKEKGSVESTGSSTATFPLHA
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atggagatgctattaagcacaaaaggcatcaccatatgcctgtttttctttgtattgagt
ttggcagcagctattgaaataccattatcagtttcccagcttccaacaatcacagagcaa
tcccacacccaggttgcctacccctttgatgaggacttcaccatcaaatgtgaagccaga
ggaaacccccagcccacctttaactggaccaaggatggaaaaccatttgatttatcatct
gacccaaggatagtttcatctaacaactctggaacttttgtgatccaaaaccggggaatc
atcaacaatttccaggggaaatatcgctgctttgcatccaatgtgctgggaactgccatg
tcagaagaaattgagctgattgttccaagtgtgccaaaattccccaaagaaaaaatcgag
cctctggatgtggagcatggagattctgtgatcctgcactgcaaccccccaaaaggcatc
ccccctttgcatatctactggatgaatattgatctgcagcacatcccacaggatgagagg
gtctccatgagcctgaagggagatctttactttgccaatgtggaggaaagcgacagcagg
agtgactattgctgctttgcagccttcccgaggctcaggaccatcgtgcagaagatgccg
atgacgctgaaggtttcccgcttaaagcatgctaatgactcaggctcacctaacgctgct
gttactaaggcaaattttatcaaggaaaggaaacccaaactgctgatccctcctgaatct
gctggcagtagctcatcagtcactgtcatcaagggaggtgtcctgctcctggagtgtatt
gctgaagggctcccaactcctcatctcagctgggtgaaggtcatgggaagcatgcccaag
gatgagccagagacagagaattttgggaagaccctgaagattgaccaggtgacagcagct
gatgaggggacgtaccagtgcacagccagcaaccccatgggcagcgccagtcacaagttc
cacgtgcatgtggaagagcctccccagtggctgaagaagcccgaaggtggtgtctacagc
gtggggacaaacctggtgctgctgtgcgaggccatcgggaaccccgagcccagcatccag
tggaagctcaatgggatgcccatcgatggcaggaccttccgggggagaatctccaccagg
gagatcagcctgaccaacctgcagctgcaggacagcgccgtgttccagtgcgaggccacc
aacaagcacggcaccatcctggccagcgccaacgtcaacgtcctcaatattgcccccctg
atactgaccccggatgaggaaaactacgccacagtcgtgggttacagcgccttcctgcac
tgtgacatctttgcctcacctgcagcagatgtcagatggactaaggatgacagcatagag
cccctttcaacgtttcgctacgagctgaacaagaacggcaccctggagatcagggacacc
aagaaggaggattcgggatcctacgcctgctgggctgcaaattccgtggggaaaagagca
atcactgctaatctggatataagggatgctacaaaacttgttgttactccaaagagcccc
cgagtgctgaaatcacattccattttattgaaatgtcaggctgagtatgattcccacttg
aaacacagttttaaattatcctggaggaaggatggagatgagctgccagtcaacagcacg
gaaggtggcagggtaattctggacagggataccctgttcatatccagtgtgctcctggag
gatcagggagtttacacatgtgtggccagcactgccctggacgctgccgaggccgaggca
cagctgatcgttctggatgttcctgacccaccagaagacctccagctgtcggaaaaccaa
aaccggagcgttcggctctcctggaaagctggggccagccataacagccctgttaatgaa
tcaattatagagtttgaagagaaccgctgggagccggggaggtggcaggagctcagcaga
gtgccagggaatgacaccacagccctgctgtccctggccccgtatgtgaattaccaattc
cgtgtggtgtccgtcaacgccgtgggcaggagccagcccagcaaaccatccctgcgctat
gccacccctccagctgctccagataaaaacccagagaacatccgagttgaggcttctgaa
cccaatgaaatggtgatgaaatgggagccactgaagcccgtggagaggaacgggccgggg
ctggagtacaaagtcagctggaggcagcggggtgtggagagcgactggaacgaggagctg
gtgaagaaacactccctgagcgtgaggaatgtgcccaccttcgtgccttacgagatcaaa
gtccaggcagtgaataatttaggatctggccccgaaccaaacgtcaccattggatattca
ggagaggacgttccagatgctgctccttcgggcgtgtcggtggaggttgtgaacagcacc
ctggtgaaagtcttctggtttgggataccaagggacagagttcgtgggcacttaaaaggc
tacaaggtcaactggtggaaaacaaaaaacatgctggatggaaagaggcatcacccagag
aaacacttcctgacgtttgtaggagacaggaactatgggatgattcctggcctggagccc
ttcagtgaattccgcttgacagttttggctttcaactccagaggagatggccctgagagc
tcccccgtggtgtttgaaactccagaaggagtccccgaacaaccacgtttcctcaggatc
ctgaactttgacaaggactcggtcactctgtcctgggggcttcccaagaaagccaatggc
cacctcacaggctacgtcctgcagtaccagataatcaacgagacgcacgaggtgggcgcc
gtgagcgaggtgagcgtcaccaaccgctccgtgctgagctggcgcctggcggggctcagc
cccagcaccaagtacaagttctacatcaaagcctgcacggccaagggctgcgggaaggcg
gccaccgaggaggggctgacgctggcccaaggcagtaaaggcagcggcaggatttcagac
gcagtaaagcccaccccaaagtttcagcccagcgaggcccttgagcctggcactgagtac
acaatccgcctagtgactaagaactgggtggataacaatagcatttttgaagatgtaatt
gagaccagggggagagcctacgctggcatttacgaggggatttccacccagggctggttc
atcgggctgatgtgtgccatcgccttgctcaccctgctgctgctaacgatctgctttgtc
aggagaaataaaggaggcaaatattcagtgaaagaaaaagaagatttgcatccagatccc
gaagctcaatcaataaaagatgaaatctttggggaatatagtgacagcgatgaaaagccg
ctgaaaggcagcctccagtcacttaacggggacattaaagccactggaagtgctgatagt
ctggtagattatggagaaggggagcatggcatgttcaatgaagatggttcatttattgga
gcttattctggatctaaagaaaaaggatccgtggaaagcactgggagttctacggcaact
tttcctctccacgcctaa
DBGET
integrated database retrieval system
