Parus major (Great Tit): 107210455
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Entry
107210455 CDS
T04864
Symbol
SLC6A1
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmaj02000
]
107210455 (SLC6A1)
Transporters [BR:
pmaj02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
107210455 (SLC6A1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
107210455
NCBI-ProteinID:
XP_015496802
Ensembl:
ENSPMJG00000004995
LinkDB
All DBs
Position
12:2377029..2418995
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AA seq
598 aa
AA seq
DB search
MATNGTKVADGQISTEVDASITNDKPKTLVVKVQKKKTDLPDRDTWKGKFDFLMSCVGYA
IGLGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFLLECSLGQYTSIGGLGVWKLAPM
FKGVGLAAAVLSFWLNIYYIVIISWAIYYLYNSFTTTLPWKHCENPWNTDRCFSNYTLAN
TTNMTSAVVEFWERNMHQMTDGLEKPGQIRWPLAITLAIAWILVYFCIWKGVGWTGKVVY
FSATYPYVMLLILFFRGVTLPGAKEGILFYITPNFSKLSDSEVWLDAATQIFFSYGLGLG
SLIALGSYNPFHNNVYRDSIIVCCINSCTSMFAGFVIFSIVGFMANVTKRPIADVAASGP
GLAFLAYPEAVTQLPISPLWAILFFSMLLMLGIDSQFCTVEGFITALVDEFPKLLRNRRE
LFIAVVCIVSYVIGLSNITQGGIYVFKLFDYYSASGMSLLFLVFFECISISWCYGVNRFY
DNIQEMVGYRPCIWWKLCWSFFTPIIVAGVFIFSAVQMTPLTMGSYVFPKWGQGVGWFMA
LSSMVLIPGYMAYMFLTLKGSLKQRIQVMIQPSEDITHPENGPDQAQQSNSANKEAYI
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaacggcaccaaagtggcggacggacagatctccaccgaggtcgacgcctcc
atcaccaacgacaagcccaaaaccttggtagtaaaagtgcagaagaagaagacggacctt
ccagaccgagacacttggaaagggaaatttgactttcttatgtcctgtgtaggttatgcc
attggcttagggaatgtgtggagatttccgtacctgtgcggcaagaacggtggaggtgca
ttcctgatcccttatttccttactttaatttttgctggagtgccactcttccttttggag
tgctccctaggtcagtatacatctataggaggccttggagtgtggaagcttgctccaatg
ttcaaaggtgtgggactggctgctgcagtcctgtccttttggctaaatatttactacatt
gtgatcatttcctgggccatatactacctgtataattcctttaccactacccttccttgg
aagcactgtgagaacccctggaacaccgaccgctgcttctccaactacaccttagccaac
accaccaacatgacaagtgccgtggtggagttctgggaacgcaacatgcaccaaatgacc
gatggcttggaaaagccggggcaaatccgatggccgctggcaatcaccctggcaattgcc
tggattctggtgtatttttgtatctggaagggggtaggctggactggaaaggtggtatat
ttctctgctacttatccctatgttatgctgcttatcttgttcttccgtggtgtaacactg
cctggagcaaaggaaggcattttattctatataactcccaacttcagtaagctttcagac
tctgaggtttggctggatgctgccacacagattttcttctcctacggtttgggtcttggt
tcactgattgcccttggaagttacaaccctttccacaataatgtttacagggactccatc
atagtgtgctgcataaactcatgcacgagcatgttcgctggctttgtcatcttctccatc
gtgggattcatggccaatgtcacaaagaggccaattgcagacgttgcagcatcaggccct
gggctggcgtttctggcttaccccgaggcagtgacgcagttgcccatctcccctttgtgg
gcgattctcttcttctccatgctgctcatgctcggcattgacagccagttctgcaccgtg
gagggcttcatcacagccctggtggacgagttccccaagctgctgcgcaaccgccgcgag
ctcttcatcgccgtggtgtgcatcgtgtcctacgtgatagggctgtccaacatcactcag
ggtggaatctatgtgtttaagctttttgactactactctgccagtggaatgagcctcttg
ttccttgtattctttgagtgcatctcgatatcctggtgctatggtgttaatagattttat
gacaacatccaagagatggtgggatacagaccctgcatctggtggaagctctgctggtcc
tttttcactcctatcatcgtggcaggagtgttcatcttcagcgccgtgcagatgaccccg
ctgaccatggggagttacgtgttcccaaaatggggccagggggtcggctggttcatggcc
ctgtcctctatggtgctgatacctggctacatggcatacatgttcctaaccctgaaaggc
tccctaaaacagcgcatccaagtgatgattcagccaagtgaagacatcacccaccctgag
aatgggccagaccaggcccaacagagcaactctgccaacaaagaagcctacatctaa
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