Parus major (Great Tit): 107210502
Help
Entry
107210502 CDS
T04864
Name
(RefSeq) laminin subunit beta-1-like isoform X1
KO
K06243
laminin, beta 2
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj04510
Focal adhesion
pmaj04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107210502
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107210502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
Nup49_C
Ferritin
Motif
Other DBs
NCBI-GeneID:
107210502
NCBI-ProteinID:
XP_033373239
Ensembl:
ENSPMJG00000004878
LinkDB
All DBs
Position
12:11488857..11504397
Genome browser
AA seq
1930 aa
AA seq
DB search
MLCLLPTSLGTGHWCVTRGPPPACTFLCLTLAEARCGQVPPLAWHGCRRRRQAPAALLQE
QQLSPARAQPEPSGPPTPQPTRATRHLPSTRGSHGHRQIPWLPMDLLALALLLVGGLVAG
GAQAPDLNHGCARGSCYPATGNLLVGRATRLSATSTCGLDGPQEYCIVSHLQDSEKCFTC
DSRDPSLPESHRIENVIYLSSPHDQRTWWQSENGVEHVSIRLDLEGEFHFTHLIMKFKTF
RPAAMLVERSADFGRTWKVYRYFAYNCSKLFPGIPNHPSGLVDEVLCDQRYSEIEPSSHG
EVIFKVLDPSIPVADPYSPDIQNLLRVTNLRVNLTKLHTLGDNLLDSRREVLHKYYYAVD
ELVLRGSCFCHGHAAHCAPAPGAPTPSVPGMIHGRCVCEHHTQGLNCERCEDFYHDLPWR
PAEGSSTNACRRCDCNEHSRRCHFDMAVFLATGNTSGAVCDGCQHNTMGRHCHLCKPFYY
RHPRSDIRSPTACAPCDCDPAGSLDGGACDGHTDVALGMIAGQCRCKENVAGPRCDRCRH
GAYGLSHGDPQGCQPCRCDPRGTVAGSSPCDPISGDCYCKRFVAGRSCSQCVPEFWGLSY
DLGGCRPCACDFGGAYNNRCSMEDGACPCRPHIMGRQCDQVQPGFFCAPLDYYTYEAEQA
TFHGHSHPQLPGAIRAEVPQDCLEYDTREPAGRKGRSRHQHNPSRAPQPPVPLRRSRQQP
PKPDVEEVVRDSAGRMVTWTGLGFARVRDGAGLTFRVDNVPYAMDYELLLRYEPESAEDW
EAVVSVSSRVLPTSSRCGNLLPSEQMYRQSLPHSQRYVLLSRPFCFEPSTPYEVTMRLQR
AGVTQRHPGAFILIDSLVLLPQVSELPGFHGAEAAVRQEELERYRCLEVFRMAPPHPLAQ
ACARLVCSVSALMHGGALPCQCDPQGSRSSECQVQGGQCECKPHVIGRRCDHCAPGSYGF
GPLGCSPCTCSPEGSVSQLCDQVSGQCRCHPGTVGRQCDQCQPSHWGFPACRPCQCNGHA
EECDPRTGTCLHCRDHTSGRHCERCQDGYYGNPVLGSGQQCRPCPCPGYPGTRNYHGSTC
HADAETHHIVCLCAPGYAGPRCDRCSPGYFGSPEMEGGECRPCQCNNNIDASDPEGCDPR
TGQCLRCLYHTAGPRCAQCQPGYYGNALQRSCRRCVCDPRGTLASHCTDGTCDCDRGTGA
CACRPNVVGKSCDHCAPHFWRLGGPGGCEPCGCHPTHALHPACDTVTGQCQCRPGFGGRV
CSQCQEHHWGDPEQECRACECEPLGAESPQCEQDNGQCRCRLGFGGLRCDRCQRGYQEPF
PHCSPCHPCFGRWDLAVGSLQEGLQRLGAQVQALREGDSALPLSPRRLRELEEALRHVEQ
LLGEGDSPGGPLLDGLPRQLGGTRMELDNFWKHLQELEQHLDQLAQTDMQHHDRLAELSH
ELGGLNRTTSHLQILLSTVAAAGFSESYRSILASMETSRQAEVVANGTAGELSRAQMTQR
ATERALRQRGDTFRRGTAAARKSLRETQKRVMGLSITRINEKICGAPGDRSCKHASCGGA
LCRDSAGTRHCGGTGCAGVLPISARALSSAHNASQQLEVALGQLGVVTQKMQEVQELARG
ALSWAEEALGRSQAARSHAEKATAQLRDFIRRIKAFLAEEGADPGSIELVARQVLNISLP
SSPRQIQELLLEMQESIGQLEGVDAVLNSTAEGLAVARDLLAQGQEARERAEGIRDELLG
TQQALEVARTQARTAGSTLQSARDAIQVAENRAREAERRLRVLDRKELQAQRRLRELAQR
ITALQEHSRDARHMAQQAKDGAQRATTTSGTLSQDLAQVTQRYVMLKNRVGMLDRVSGGA
LQRLSQLMAEAQDLLDKASNSKRKLEDLEQRFGANERTMAAKVTRLQALEQQVTGLLLDI
RERANAYATC
NT seq
5793 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgccttctcccgaccagcctaggcacaggacactggtgtgtcacacgtgggcca
ccgccagcgtgtaccttcctctgcctcaccttggctgaagctcggtgcgggcaggtccct
cccctcgcctggcacggctgccggaggaggagacaggcaccggccgccctcctccaggaa
cagcagctgagcccagcccgagcccagcccgagcccagcgggcctccgactccacagccc
acccgggccaccagacacctgcccagcacccgaggctcccacgggcacaggcagatcccg
tggttgcccatggacctcttggcacttgctctcctcctggtggggggactggtggcagga
ggtgcccaggcacctgacctgaatcatggctgcgcccgcggcagctgctacccagccact
gggaacctgctggtggggcgagccacccgcctgagtgccacctccacctgtgggctggat
gggccccaggagtactgcatcgtcagccacctccaggactcggagaaatgtttcacctgt
gactcacgtgacccatccctgcctgagagccaccgcatagagaatgtcatctacctaagc
agcccccatgaccaacggacctggtggcagtcagagaatggtgtggagcatgtcagcatc
cgcctggatctggagggcgagttccacttcacccacctcatcatgaagtttaaaaccttc
cgccccgcggccatgctggtggagcgctcagcagactttgggcgcacctggaaggtttac
cgctactttgcctacaactgctccaagctcttccctggaatccccaaccacccttcgggg
ctcgtggatgaagtgctgtgtgaccagcgctactctgagatcgagccttccagccatggg
gaggtcatcttcaaagtgctggacccctccatccctgtggcagatccctatagcccagac
atccagaacctgcttcgtgtcaccaacctgcgggtgaacctcaccaagctgcacacactg
ggtgacaacctgctggactcacggcgggaggtgctgcacaagtactactacgctgtggat
gagctggtgctgcgtgggagctgcttctgccacggccacgctgcccactgtgccccagca
ccgggtgccccaacaccctctgtccccggcatgatccatgggcgctgtgtctgtgagcac
cacacgcaggggctgaactgtgagcgctgcgaggacttctaccatgacctgccctggcgc
ccggccgagggctccagcaccaacgcctgtcgccgctgtgactgcaacgagcactcacgg
cggtgccactttgacatggccgtgttcctggccacggggaacaccagtggggctgtgtgt
gatggctgccagcacaacaccatgggccgccactgccacctctgcaagcctttctactac
cggcaccctcgctctgacatccggtcccctactgcctgtgccccgtgcgattgtgacccg
gcaggctcactggatggaggtgcctgcgacgggcacacggacgtggcgctgggcatgatt
gcggggcagtgccgctgcaaggagaatgtggccggtccccgctgtgaccgctgccggcac
ggcgcctatggcctcagtcatggcgacccacagggctgccagccatgcaggtgtgaccca
cggggtacagtggcaggcagctccccgtgtgaccccatcagtggggactgctactgcaaa
cgcttcgtggctgggcgctcctgcagccagtgtgtgcctgaattctggggtctgagctac
gacttggggggctgccggccctgcgcctgtgacttcgggggagcctacaacaaccggtgc
tccatggaggatggtgcatgtccctgccgtccccacatcatggggcggcagtgtgaccag
gtacaacctggcttcttctgtgcccccctcgactactacacttatgaggccgagcaggcc
accttccatggccacagccaccctcaactcccgggtgccattcgggcggaggttccccag
gactgcctggagtatgacacgagggagccggcagggcggaagggacgctcacggcatcag
cacaacccttcccgtgctccccagccccctgtccccttgcgccgcagccgccagcagccc
cccaagccggatgtggaggaggtggtgcgggacagtgccggtcgcatggtgacgtggaca
ggcttggggtttgcccgcgtgcgggacggggctggcctgaccttccgtgtggacaacgtg
ccctacgccatggactatgagctgctgctgcgctatgagcctgagtcagccgaggactgg
gaggccgtggtcagtgtcagctcccgtgtgctgcccaccagctctcgctgtgggaacctg
ctgccctccgagcagatgtaccgccagagtctgccccacagccagaggtatgtgctgctc
tcccggcccttctgcttcgagcccagcaccccttatgaggtgacaatgcggcttcagcgg
gctggtgtcacccagcgccaccctggtgccttcatcctcatcgactcgctggtgctcctg
ccgcaggtgtcagagttaccagggttccatggggcagaggcagcagtgcgccaggaggag
ctggagcggtaccggtgcctggaggtgtttcgcatggccccccctcatcccctggcccag
gcctgtgcccgcctggtctgcagcgtctcagccctgatgcacggcggggcactgccctgc
cagtgcgacccacagggctcccgcagcagcgagtgccaggtacagggcgggcagtgtgag
tgcaagccccacgtcatcggccgacgctgtgaccactgtgccccaggcagctatggcttt
gggcccctgggatgcagcccctgcacctgctccccagagggctcagtgtcccagctgtgc
gaccaggtgagcgggcagtgccggtgccatcctggcaccgtgggccggcagtgtgaccag
tgccagcccagccactggggcttccctgcctgccggccctgccagtgcaatgggcacgct
gaggagtgtgacccccggacgggcacctgtctgcactgccgcgaccatacgagcggacgg
cattgtgagaggtgccaggatggttactatgggaaccctgtgctgggctcggggcagcag
tgccggccctgcccctgccccggctaccctggcacacggaattaccatgggagcacctgc
catgccgatgctgagacacaccacattgtctgcctctgtgcccctggatatgcagggccc
cgctgcgaccgctgctcccctggttactttgggtctccggagatggaggggggggagtgc
cggccctgccagtgcaacaacaacatcgacgccagcgacccagagggctgtgacccccgc
acgggccagtgcctgcgctgcctgtaccatactgctgggccacgctgtgcccagtgtcag
cctggctactacggcaatgccctgcagcgcagctgccggcgatgtgtctgtgacccacgg
ggtacactggcctcccattgcaccgatggcacctgcgattgtgaccgtggcacaggagcc
tgcgcctgccgccccaacgtcgtgggcaagagttgtgatcactgtgcaccccacttctgg
aggctggggggcccagggggctgtgagccctgtggctgccaccccacacatgccctgcac
cctgcctgtgacacagtgacagggcagtgccagtgccggcctggcttcgggggtcgtgtc
tgttcccagtgccaggagcaccactggggagaccccgagcaggagtgccgagcctgtgag
tgtgagccgctgggtgctgagagcccacagtgcgagcaggacaacgggcagtgccggtgc
cgcctgggattcggggggctgcgctgtgaccgctgccagcggggctaccaggagcccttt
ccccactgctctccctgccacccttgctttgggcgctgggacctggccgtgggcagcctg
caggaaggactgcagcgccttggggcacaggtgcaggccctgagggagggggactccgca
ctcccactcagcccccgccgcctgcgggagctggaggaggctctgaggcacgtggaacag
ctgctgggagagggggacagccctggtggtcccctcctcgatggactgcccaggcagctg
ggtggtaccaggatggagctggacaacttctggaagcacctccaagagttggagcagcat
ctagatcagctggcgcagacggatatgcagcaccatgaccggctagctgagctgagccat
gagctgggaggtctcaaccgaaccacctcccaccttcaaatcctcctcagcactgtagca
gcagctgggttcagcgagtcttaccgcagcatcctggcatcgatggagacctcgcggcag
gcagaggtggtggccaatggcacagctggcgagctaagtagggcgcagatgacacagagg
gcaacagagcgtgctttgcggcagcggggcgacactttccgccgtggcacagccgcagcc
cggaaatccttgcgggagacacaaaaacgggtgatgggactcagcattaccaggatcaat
gagaagatttgtggggcacccggagaccggagctgcaagcacgcgtcttgcggaggagcc
ttgtgccgagacagtgcagggacaaggcattgcggtggcactgggtgtgcaggggtactg
cctatctcagctcgagccctgagcagtgcccacaatgcctcacagcagctggaggtggca
ttagggcagctgggtgttgtgacacagaagatgcaggaggtgcaggagctggcacggggg
gcactcagctgggcagaggaggcactggggcgctctcaggccgctcgcagccatgcagag
aaggcaacggcccagctgagggactttatccgccgaatcaaggccttcctggcagaggag
ggagctgacccaggcagcattgagctggtggcccggcaggtgctgaacatctccttgccc
agcagccccagacagatccaggagctgctcttggagatgcaggagagcattggccagctg
gagggggtggacgcagttctcaacagcacagcggaggggctggctgtggcacgggatctg
ctggcacagggacaggaggccagggagcgagcagaaggcataagggatgagctgttgggg
acacagcaggcactggaggtggcacggacacaagcaaggacagcagggagcaccctgcaa
agcgccagggatgccatccaggtggctgagaacagagccagggaggcggagcgcaggctg
cgggtgctggacaggaaggagttgcaggcacagaggcggctgcgggagctggcacagcgc
atcaccgccctgcaggagcacagccgggatgctcgccacatggcccagcaagccaaggac
ggggcacagcgtgccaccaccacctcggggacacttagccaggacctggcacaggtaaca
cagcgttatgtgatgctgaagaaccgggtgggcatgctggacagagtgtctggtggggcc
ctgcagcgcctgtcacagctgatggcagaggcccaagacctcctggataaagccagcaac
agcaagaggaagctggaagacctggagcagcgctttggggccaatgaaaggacaatggcg
gcaaaggtgacacgactgcaagctttggagcagcaagtcaccgggctgttgctggacatc
cgggagagggccaacgcttacgccacttgctag
DBGET
integrated database retrieval system
