Parus major (Great Tit): 107210511
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Entry
107210511 CDS
T04864
Symbol
CNTN6
Name
(RefSeq) contactin-6 isoform X1
KO
K06761
contactin 3/4/5/6
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pmaj04515
]
107210511 (CNTN6)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pmaj00537
]
107210511 (CNTN6)
Cell adhesion molecules [BR:
pmaj04515
]
Immunoglobulin superfamily
Contactins
107210511 (CNTN6)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pmaj00537
]
Others
107210511 (CNTN6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_5
Ig_DSCAM-DSCAML_C
Ig_6
Ig_C17orf99
Pur_ac_phosph_N
Tissue_fac
C2-set_3
Motif
Other DBs
NCBI-GeneID:
107210511
NCBI-ProteinID:
XP_015496915
Ensembl:
ENSPMJG00000005736
LinkDB
All DBs
Position
12:18104450..18229876
Genome browser
AA seq
1038 aa
AA seq
DB search
MVLLWKLISLLPFMSCSTGEETLHGPIFIQEPYDITYSMGSANPEILLNCTAKGYPLPYY
RWKQNGTDIDLTMSYHYRLVGGSLAINNPHKNQDIGTYQCLATNSFGTILSRKAKLQFAY
LENFETRARSPVSVREGQGVVLLCGTPPHHGALSYTWIFNNNTLDLREDSRRFVSQATGN
LYLAKVEPWDVGNYTCAVSSAQAQRQVWGSPTALTLRGDGAMGEYEPKIEVRFPETTYAA
KGSSVRLECFALGNPVPSISWKRSDGSPLAKKIQHKTGGVLEIPNVEEEDEGSYECIAGN
TRGINIARGQLFVYAPPEWDKKIQNAFLSLYDSLFWECKARGTPSPSYSWLKNGQPLMSE
ERIQIENGTLLIPMLNLSDSGLYQCVAENKYDTIYANAELRVIAAAPDFSRNPVKKLSVV
QVGGEVTIGCKPSASPRAVVSWRKGSEVLRQNKRVMLLEDGSLRISNTSKADAGVYICVA
TNQFGTARNSGNLIVKERTVITIPPSDTDATVGESIVLPCQVSHDPSLDLVFWWSFNGQR
IDLSRGIHHFERIGRESAGDLMIRNIQLHHSGKYVCMVQTSLDSQSAAADIIVRGPPGPP
EDVKVEHVSSTTAGLSWKPGVDNNSPVQIYSVQTRTPFSVGWQAVATAPEVINGRTLKAT
VVDLSPWVEYEFRVVASNSVGIGEPSRPSALLRTKAAVPVVAPTNISGGGGSRSELVITW
EPVSEELQNGEGFGYIVMFRPLGSTTWTKAVVASVESSKYIYRNESITPLSPFEVKVGVY
NNEGEGTLSSISIIYSGEDEPQMAPAGASALSVSAAAVEVSWLPIPWNRHTGRVLGYEVL
YWIDDPKESTAGKVRVSGNVTAKNITGLRANTVYFATVRAYNTAGTGPSSTPVNVTTKKS
PPSQPPANIAWKLTNSKICLNWEHVKTMENESEVLGYKILYRQNRHSKAHILETNNTSAE
LLVPFEEDYLIEIRTVSDGGDGSSSEEIRIPKISSLSSGAMKLSQRISHTLTSGILLLSS
VLLNPFPCWFKQCSAVDF
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atggtgttgctatggaaactaataagtctgctgccattcatgagctgcagcacaggggaa
gaaacccttcatgggcctatttttatccaagagccatatgatatcacttattccatgggc
tcagcaaatccagagatcctcctgaactgcacagctaaaggatatccactgccatactac
aggtggaagcaaaatggcacagatattgatcttaccatgagttatcactacaggttggtt
ggaggcagcttggcaatcaataacccacataaaaatcaggatattggaacataccagtgt
ttggccacaaattcatttggaacaattctgagcaggaaggcaaagcttcaatttgcatac
ctggagaacttcgagacgagagcgaggagcccggtgtcggtgagagagggacaaggagtg
gtcctgctctgtggaactcctccccaccatggagccttgtcctacacctggatcttcaac
aataacaccctggaccttcgggaagacagccggcgctttgtttcccaggcaacaggaaac
ctgtacctggccaaggtggagccgtgggatgttgggaattacacctgtgccgtgagcagt
gcccaggctcagcgccaggtctgggggtctcccactgccctcaccctccgaggagatggt
gcgatgggggagtatgagccaaagattgaggtgcgcttcccagaaacaacctacgcggca
aagggctcctccgtcagactggaatgcttcgccctgggaaatcctgtgccaagtattagc
tggaagaggtctgatggaagccccttggcaaagaaaatccagcacaagactggaggagtt
cttgaaatccccaacgttgaggaggaagatgaaggttcctatgagtgcatcgcaggaaac
actcgaggaataaacattgcaagaggtcaattatttgtctatgcaccccctgaatgggat
aaaaaaatccaaaatgcctttctgtctctctatgacagtttattttgggaatgtaaggca
agaggaacaccaagtccttcctatagctggttaaaaaatggccagcccctcatgtcagag
gaaagaattcaaatagaaaatgggactctcctcatccccatgctgaatctgtcagactca
ggcctctatcagtgcgtggcagaaaataaatatgacaccatttatgccaatgctgagctg
agggtgatcgctgcagcccctgatttttccagaaatcctgtgaagaagctgtctgttgtt
caggttggaggggaagttacaattggttgtaaacccagtgcttctcccagagctgttgtt
tcctggagaaagggctcggaggttctgcgccagaacaaaagggtgatgctcctggaggat
ggcagcctcaggatctccaacacctccaaggcggatgctggggtttacatttgtgtagcc
acaaaccagtttggaacagccaggaactcagggaacctgattgtgaaagaaaggactgtc
atcaccattcctccctctgacacagacgcaacagttggagagagcattgtcctgccctgc
caggtgtcccacgacccctccctggacctggtgttctggtggtcattcaatggccagaga
attgatctgagcagaggaatccatcactttgaaaggattggaagagaatctgctggtgat
ttgatgataagaaatattcagctgcatcattctgggaaatatgtgtgcatggtgcaaact
tctttagacagtcaatctgcagcagcagatataattgtgagaggccccccaggtccacca
gaagatgttaaagttgaacatgtttctagcacgactgctggcttatcctggaagcctgga
gtagataacaacagcccagtgcagatctacagtgtccagaccaggactcccttctcggtg
ggatggcaggcggtggccacagctcccgaggtcattaacgggaggactctcaaggccaca
gtggtggatttaagcccctgggttgagtacgagttccgggtggttgccagcaacagcgtt
gggattggggagccgagcaggccatcggctctcctgagaaccaaagcagcagtccctgtg
gtggcacctacgaacatcagcggaggaggagggagccgctccgagctggtcatcacctgg
gagccagtgtcagaagaactccaaaacggggaaggttttggctacatcgtcatgttccgt
cccctgggctcaacaacctggaccaaagctgtggtggcctcggtggaatccagcaaatac
atttacaggaatgagagcatcacacccctctctcctttcgaggtgaaagttggtgtctac
aacaacgaaggagaagggaccctgagctccatttccatcatctactcgggagaggatgag
ccacagatggccccggcgggcgcctcggcgctgagcgtgtcggcggcggcggtggaagtg
tcctggctgcccatcccctggaaccggcacacgggaagggtgctgggctacgaggtttta
tattggatagatgatcccaaggaaagcacagctgggaaggtcagagtcagtgggaatgtg
acagccaaaaacatcacgggcctgagagctaacacggtgtattttgcaacagtccgtgcc
tacaacactgcggggacggggccctccagcaccccggtgaatgtcaccaccaaaaaatcc
ccaccaagtcaacctccagcaaacatcgcctggaagctgacaaattccaaaatctgcctg
aactgggagcatgtgaaaacaatggagaatgagtctgaggtgttgggctacaaaattctg
tacagacagaacaggcacagcaaagcccatatcctggagacaaacaacacttcagctgaa
cttctggtcccgtttgaagaagattatctcatcgagataagaaccgttagtgatggtggc
gatggcagcagcagtgaggaaattaggattccaaaaatatcgagtttgagctctggagca
atgaaattatcccaaaggataagccacacattgacatctggaatcctgctgttgagttct
gttcttctaaacccttttccttgctggttcaagcaatgctcagccgtggacttttaa
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