Parus major (Great Tit): 107210747
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Entry
107210747 CDS
T04864
Symbol
UIMC1
Name
(RefSeq) BRCA1-A complex subunit RAP80 isoform X1
KO
K20775
BRCA1-A complex subunit RAP80
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107210747 (UIMC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmaj03400
]
107210747 (UIMC1)
DNA repair and recombination proteins [BR:
pmaj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
107210747 (UIMC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAP80_UIM
UIM
Motif
Other DBs
NCBI-GeneID:
107210747
NCBI-ProteinID:
XP_015497461
Ensembl:
ENSPMJG00000007509
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Position
13:3364139..3403776
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AA seq
812 aa
AA seq
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MPRRKKPAEGLKSGGQDGEEEEEEKRNPVNAKKKRSFVDAFIVISDSDGEQESEEESELQ
KKRTKQLDRTKFAAKRKIAQMTEEEQFALALKMSEQEARQVNCQEEEEEELLRKAIAESL
SSCQPSDSSTATPQLSVEALDSQGQSQPAEREGSEILGGLAFCPDTPPSDCSSHSQSSRA
DGNGQMDVARRPLVVLRRLSQEIVENSLVSSIIVSPGKGQPVTRSSEKSSSPAKRDSSNM
LPSTLGEDFMSLSPTFGKVASGGSWRLTPRRLFASPSSSSEAEGHESNEQLLPCTGCSVG
EAGAGSSATLCKSRTTEQCDSPRRSGGGAGTKHSSQPGHTAKVCVSTEQAEQNEGSGSTP
DLCMLTAVEDKHKREEARDTVHYYWGIPFCPKGVDPNQYTKVILCQLEVYQKSLKQAQRQ
LLHKKEFGSPVVPSSSLSQNELGKGEEISRENGVADGTEDGDTEGQESENITWLHPSKKR
EAESPGHSMEEEKNSNSDDEPTTSYCQSSQVLPAEDVPEDGEPMQIAQSISTMTPLGSKR
SPDIATENSAEEEISVCPETQPSPLEAVEEEEREELCSDSRGAPMQVGGDEDAGRAVSEC
SPAAHVSCPLCDHGFPADKIEVHAMYCNGIAGPEPGEDTPVLTRHQREARNKAASGESSP
PSLDIDKCEKCYLCKSLVPLLQYQRHVDSCLQAARQAQGTRRLRRAKDTGRQERGLLRML
ELSESKSEGADAGTPLTGLGDQQSSPTLSAADGEPSAESPISLQHLPFHVSPAKPRISLE
AVDGVVDSEPHMALPAGSQQRTKGCRRRRHKF
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggaggaagaagcctgcagagggcctgaagtctggaggtcaggatggggaggaa
gaggaggaagagaaaaggaacccagtcaatgccaagaagaagcgcagttttgtggatgca
tttattgttatatctgacagtgacggagagcaggagtcagaggaagagagcgaattgcaa
aagaagagaacaaagcagctggatcgaacgaagtttgctgctaaaagaaaaattgcacag
atgactgaagaggaacaatttgcactggccctgaaaatgagtgagcaagaagctagacaa
gtgaactgtcaggaagaggaagaggaggagctcttgaggaaggccattgctgagagcctt
agtagctgtcagccctcagactcgtcgactgcaactcctcagctgtcagtggaagcactg
gattcacagggccaaagccagcctgctgagagagaaggctctgagatcctgggaggcctg
gcattctgccctgacacccctccctctgactgcagctcccactcacagagctccagagct
gatgggaatggacagatggatgtcgcccggagacccttggtagtgttgaggaggttaagc
caggaaatcgttgaaaactcactagtatccagcataatcgtgtctccggggaagggccag
cctgtgacaaggtcaagtgaaaagtcttcctcaccagcaaaaagagattcgagtaacatg
ttacccagcactcttggagaggacttcatgtctttgagtcccacctttggcaaggtggct
tcaggaggctcctggcgactgacacctcggagactgtttgccagcccctccagctcttct
gaagcagaaggccatgaatcaaatgagcagcttctgccctgcactggatgttctgtggga
gaagctggtgctgggagctcagctacgctctgcaagagcaggaccacagaacagtgtgac
agtcccaggaggagcggtggaggagcaggtaccaaacacagctcacagcctgggcacact
gccaaggtctgtgtttccacagagcaagcagagcagaatgaggggtctggcagcaccccg
gatctttgcatgctgactgcggtggaggacaagcacaaacgggaggaggcaagagacaca
gtgcactattattggggcatccccttctgccccaaaggggtggaccccaaccagtacacc
aaagtcatcttgtgtcagctggaggtttaccagaagagccttaagcaggctcagagacag
ctgttgcataagaaggagtttggtagcccggttgtgcccagttcttccttgagccaaaat
gagcttgggaaaggagaggagataagcagggagaatggggttgctgatggtacagaagat
ggagatacagagggacaggaatctgaaaacatcacctggctccacccttcaaagaagagg
gaggcagagagcccagggcacagcatggaagaagagaagaactccaattctgatgatgaa
ccgaccaccagctactgtcagtcctcccaggtactgcctgcagaggatgtgcctgaagat
ggggaacccatgcaaattgcacagagcatctccacaatgaccccacttggcagtaaaaga
agcccagatattgccacagaaaactctgctgaagaagagatctctgtttgcccagagaca
cagccaagcccactggaagctgttgaggaggaggagagagaagagctctgttcagacagc
agaggtgcacctatgcaggttggtggggatgaagatgctggcagggctgtgtctgagtgc
agtcctgctgcccacgtgtcgtgcccactgtgtgaccacggcttcccagccgacaagatc
gaggtgcacgccatgtactgcaacggcatcgcgggaccggagcccggcgaggacactcca
gtgctcacccggcatcagagagaggcaagaaataaagctgccagtggtgaaagcagccca
ccatccttagacattgacaagtgtgagaagtgctacctctgtaagtcactggtgccactg
ctgcagtatcagaggcacgtggacagctgccttcaggctgctaggcaagctcagggaacc
aggaggctgcgaagagccaaggacaccggaaggcaggagagaggactcctcaggatgctg
gagctctcggagagcaagtctgaaggtgctgatgcagggactcccctcactggattagga
gaccaacagtcctctcccacactctcagccgctgatggggagccgtcggcagagagcccc
atctctcttcagcaccttcctttccatgtctcccctgcgaaacccagaatctccttggaa
gccgtggacggtgtggtggactcggagccacacatggctctccctgcaggcagccagcaa
cggaccaaaggctgccgccgaagaaggcacaagttctga
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