Parus major (Great Tit): 107210818
Help
Entry
107210818 CDS
T04864
Symbol
EBF1
Name
(RefSeq) transcription factor COE1 isoform X1
KO
K09103
early B-cell factor
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmaj03000
]
107210818 (EBF1)
Transcription factors [BR:
pmaj03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
107210818 (EBF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
HLH
Motif
Other DBs
NCBI-GeneID:
107210818
NCBI-ProteinID:
XP_015497606
Ensembl:
ENSPMJG00000007662
LinkDB
All DBs
Position
13:3811134..4076935
Genome browser
AA seq
592 aa
AA seq
DB search
MFGIQESIQRSGSSMKEEPLGAGMNAVRTWMQGAGVLDASTAAQSGVGLARAHFEKQPPS
NLRKSNFFHFVLALYDRQGQPVEIERTAFVGFVEKEKEANSEKTNNGIHYRLQLLYSNGI
RTEQDFYVRLIDSMTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDP
VIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKH
GRRARRLDPSEGTPSYLEHAATPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVIFGTML
VWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGTPGRFIYTALNEPTIDYGFQRL
QKVIPRHPGDPERLPKEVILKRAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNHN
QLPALANTSVHAGMMGVNSFSGQLAVNVSEASQATNQGFTRNSSSVSPHGYVPSTTPQQT
NYNSVTTSMNGYGNAGMSNLGGSPTFLNGSAANSPYAIVPSSPTMASSTSLPSNCSSSSG
IFSFSPANMVSAVKQKSAFAPVVRPQTSPPPTCTSTNGNSLQAISGMIVPPM
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggattcaggaaagcatccagcggagtgggagcagcatgaaggaagagcccctc
ggcgcggggatgaacgcggtgcggacgtggatgcagggagccggcgtcctggacgccagc
acggccgctcagagcggagtgggtctggcccgggctcacttcgagaagcagccgccttcc
aacctgaggaagtccaactttttccacttcgtcctggctctgtacgaccggcaggggcag
cccgtggagatcgagcgcaccgccttcgtgggcttcgtggagaaggagaaggaagccaac
agcgaaaagaccaacaacgggatccactaccgcctgcagctgctctacagcaatgggatc
aggacggagcaggatttctacgtgcgactcatcgactccatgaccaagcaggcgatagta
tatgaaggccaagacaagaacccagaaatgtgccgagttctgctcacgcatgaaataatg
tgcagccgctgttgtgacaagaaaagctgtggcaacagaaatgagactccatcagatcca
gtgataattgacaggttcttcttgaaatttttcctcaaatgtaaccaaaattgcctaaaa
aatgcaggaaaccctcgagacatgcgtcgattccaggttgtggtgtctacaacagtcaat
gttgatggccacgtgttggcagtgtcagacaatatgtttgtgcacaacaattccaagcac
gggcggagagctcgaagactcgatccctcggaaggtacgccttcttatctggaacatgca
gctacaccatgtatcaaagccatcagtccaagtgaaggatggactacaggaggtgccact
gtcatcatcataggagacaatttctttgatgggttacaggtcatattcggcaccatgctg
gtttggagtgagctgattactccacatgccatccgtgtacagacgcctccccgacatatc
ccaggggttgtagaagtcacattgtcctacaagtctaagcagttttgcaagggaacgcct
ggaagattcatttacacagctctgaacgaacccaccattgactacggtttccaaaggtta
cagaaggttatcccccggcaccccggtgaccccgaacgcttgccaaaggaagtaatactt
aagagggctgctgatttagtagaagcactctatggtatgccacataataaccaggaaata
atcctgaaaagagccgcagacatcgccgaagcgctctacagcgtcccccgcaaccacaac
cagctccccgccctcgccaacacctccgtccacgcgggaatgatgggagtgaattccttc
agtggccagctcgctgtcaatgtctctgaagcctcccaagccaccaaccagggtttcacc
cgtaactccagcagtgtgtcacctcacggctacgtgccaagcaccaccccacagcagaca
aactacaactctgtcacaacaagcatgaatggctatggcaatgctggaatgtcaaattta
ggcggttctccaacctttctgaacggatctgctgccaattctccctatgccattgtgcca
tcaagtccgacgatggcctcctccactagcctcccctccaactgtagcagctcctccggg
attttctccttctcaccagccaacatggtctcagcggtgaaacagaagagcgcgttcgcg
cctgtcgtgagaccccaaacctccccccctcccacctgcaccagcaccaatggcaatagc
ctgcaagctatatctggcatgattgttccccccatgtga
DBGET
integrated database retrieval system
