Parus major (Great Tit): 107210847 Help Entry 107210847         CDS       T04864                                  Symbol RAD50 Name (RefSeq) DNA repair protein RAD50   KO K10866   DNA repair protein RAD50 [EC:3.6.-.-] Organism pmaj  Parus major (Great Tit) Pathway pmaj03440   Homologous recombination pmaj03450   Non-homologous end-joining pmaj04218   Cellular senescence Brite KEGG Orthology (KO) [BR:pmaj00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     107210847 (RAD50)    03450 Non-homologous end-joining     107210847 (RAD50)  09140 Cellular Processes   09143 Cell growth and death    04218 Cellular senescence     107210847 (RAD50)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:pmaj03032]     107210847 (RAD50)    03400 DNA repair and recombination proteins [BR:pmaj03400]     107210847 (RAD50) DNA replication proteins [BR:pmaj03032]  Eukaryotic type   DNA Replication Termination Factors    MRN complex     107210847 (RAD50) DNA repair and recombination proteins [BR:pmaj03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     MRN(MRX) complex      107210847 (RAD50)     BRCA1-C complex      107210847 (RAD50)    NHEJ (non-homologous end-joining)     MRX complex      107210847 (RAD50) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Rad50_zn_hook SMC_N AAA_21 AAA_23 SbcC_Walker_B AAA_15 DUF2703 AAA_29 AAA_24 AAA_13 Motif Other DBs NCBI-GeneID:  107210847 NCBI-ProteinID:  XP_015497670 Ensembl:  ENSPMJG00000014458 LinkDB All DBs Position 13:10723850..10743031 Genome browser AA seq 1312 aa AA seqDB search MSRIEKMSILGVRSFGVEDKDKQIITFFNPLTILVGPNGAGKTTIIECLKYISTGDFPPG TKGKTFVHDPKVANETDVRAQIRLQFRDVNGELVAVQRSMVCTQKGKAPEFKTLESVITR TKHGEKVSLSSKCAEIDREMISALGVSKSVLNNVIFCHQEESNWPLSEGKALKQKFDEIF SATRYIKALEALRQVRLKQSLKVKECQTELKYLKQNKEKAQEIQDHLSNREAQLAASKEN VISIENQLEPLKSSLAVVEQNLTKVMRLDNDVKALESRKRQMEKDNQDLQQKMEKVFQGT DEQLRDRHQNHQRIVKEKEKRLLDCKRDLDRATKECQRFNSEKSELLVEQGRLQLQADRH QEHIVMRDSLIQSLAAQLELEGFERAPFTERNIARFRGLVKDRQERDTEAANRMMREFAQ KEAMKQKQLDEIRDKKTGLERTIDLKSDIQNKKQAELKNVKCELQQLEGFSDRISELDEE IGKMEYELEKAERSSNVETLEQEVQTLQSEKINLDKALRKLDQEMEQLNLHTTTITQMEM LRKDKAEKEDQIRKVKSRHSDELTSLLGYFPNKKQLEDWLHGKNKKINQTRDALANLNKR LASVEYDKTYASNELKKKEAQLSFHEAKLFDVCGSQDFDSDLNKLQDEIEKNSKQRAVLA GATAIYSQFITQLTEENQSCCPVCQRAFQTEAELQDVISDLQSKLRLAPDKLKSTESELK RKEKKRDEMMSLKPLRQTVIELQDKEIPDLRSKIQNANRDLTGLKGEIEEQESLLQTALS EEEGAKACLQDISLMERYQTDIRDVERKIAQQEAKLLGVDLSRTVLQVSQEKQEKKHLWD TVTGKIELNQKLKQDQQSQIQQLKSAVNELKAEKLQIVSRMQRRRQLEEQTVELTTEVQS LCREIKEAKEQVLPLHSTLEKLQQEKEELVNKRTASNKETQEKMNGINEKIKDINKYMKE IENYIQQGKEEYKKQKESELDEVNSRLAACEKQKEKISKEMEMTRQDIDTQKIQERWLED NLTLRKRNEELKEVEDNIKQLMKQMGEMKVPQMKNDQKHLEEKIESLKRNHHVALGRQRG FEEEIVRFRKELREPQFKDAEEKYRDMMIVMRTTELVNKDLDLYYKALDKAIMTFHSMKM EEINKIIRDLWRSIYRGQDIEYIEIRSDADENVSATDKRRNYNYRVVMVKGDTALDMRGR CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRLHQR NFQLLVITHDEDFVELLGRSEYVETFYRIKKNIDQCSEIMKCSVSSLGSYVH NT seq 3939 nt NT seq  +upstreamnt  +downstreamnt atgtcaaggattgaaaaaatgagtatcctcggagtgaggagttttggggtagaagataaa gacaaacaaattatcactttctttaatccattaactattttggtgggaccaaatggtgca ggaaaaacgactatcattgaatgtcttaagtacatatccactggtgattttcctccaggc accaaaggaaaaacatttgttcatgatccaaaggttgcaaatgaaactgacgttagagct cagataaggttacagtttcgagatgtcaatggggagcttgtagctgtccagcgctccatg gtctgtacccagaaaggcaaggctccagaatttaaaacactggaatctgttattactaga acaaagcatggtgagaaagtcagtctgagttccaagtgtgctgaaatagatcgggagatg atcagtgcccttggtgtttccaagtctgtgcttaacaatgtcattttctgtcaccaagaa gaatccaactggccgttaagtgaagggaaggccctgaagcaaaaatttgatgagatcttt tcagcaacaaggtatatcaaagcactcgaagctctgcgtcaggtacgactgaagcaaagc ttgaaagtaaaagagtgtcagacagaactgaaatatctaaaacagaataaagagaaagca caggaaatccaggatcatctcagcaacagagaggctcaactggctgcttctaaggagaat gtaatatcaattgagaatcagcttgagcctctaaagagctctctggcagtagttgaacag aatctcacaaaagtaatgaggttggacaatgatgtgaaggcccttgagagcaggaagcgg cagatggaaaaagataatcaagatttgcaacagaagatggaaaaggtttttcaaggaaca gatgagcaactaagggatagacaccagaaccaccagagaatagtgaaggagaaggagaag aggttgttggactgtaagcgtgatttagacagagccactaaagaatgccagagatttaac agtgagaaatcagagctgcttgttgaacaaggtcgtcttcaactgcaggcagatcgtcac caagagcacattgtgatgagggattccttaattcagtctctggcagcacagctggaatta gaggggtttgagcgagcacctttcactgaaaggaacattgccagatttcgtgggttggtg aaggacagacaggagagagatacagaagctgcaaatcgtatgatgagagaatttgcacag aaagaagcaatgaaacaaaaacagttagatgaaataagagacaagaaaactggattagaa agaactattgacctgaaatcagacattcaaaataagaaacaagcagagctgaagaatgta aaatgtgaattgcagcagttggaggggttttcagacaggattagtgagttggatgaggag attggcaagatggagtatgagctggagaaggctgagaggagcagcaatgtagaaacactg gaacaggaagtacagactctgcaaagtgagaaaataaacctggacaaagctcttaggaag ttggatcaagagatggagcagttgaatctacacaccacaacaattacccaaatggagatg ctgaggaaagacaaagcagagaaagaagatcagattagaaaagtaaagtcaagacattct gacgaactaacatcattgctgggatactttcccaataaaaaacaacttgaggactggctt catggtaaaaataaaaagattaatcagacaagggatgctcttgctaatctgaacaagcga ctggcatcagtagaatatgataaaacttatgccagtaatgagctaaaaaagaaagaagcc cagttgtcctttcatgaagcaaaactttttgatgtttgtggaagtcaagattttgacagt gacctgaacaaacttcaagatgaaattgaaaaaaattccaagcagcgagctgtgcttgct ggagccactgcaatttattcacagttcattacacaactgacagaggagaaccagtcttgt tgtccagtttgccaaagagcttttcagacagaagctgaactgcaagatgtcattagtgat ctgcagtctaaactgcgccttgccccagacaaactgaagtcaacagagtctgagcttaaa agaaaggagaaaaaacgtgatgaaatgatgagtcttaaaccactgcggcaaactgtaatt gaactccaagataaggaaattccagacctgaggagcaagatccagaatgcaaacagagat ttaactggcctgaagggtgagatagaagaacaggaatcactcctccagacagctttgtct gaggaagaaggtgccaaagcatgtttacaggatataagtctgatggaaaggtatcagact gatattagggatgttgaacgaaaaattgctcagcaggaggctaagctgctaggtgttgat ttaagtagaactgtgctacaagtaagccaagaaaaacaagagaagaaacacttgtgggat acagttactggtaaaattgagttaaatcaaaaactcaagcaggaccagcaaagccagatt cagcagctgaagagtgcagtgaatgaactgaaagcagagaagctgcagattgtcagccgc atgcagcggcgccggcagctggaggagcagactgtggagttaaccactgaggttcagtcc ttatgcagagagatcaaggaagcaaaagaacaggtacttcctttgcattcaacattagag aaattgcagcaggagaaggaggaactagtgaataaaaggactgcaagtaataaagaaaca caagagaagatgaatggcataaatgagaaaattaaagatataaataagtacatgaaagaa attgaaaactatattcaacaaggaaaagaagaatataaaaagcaaaaggagtctgaactt gatgaagtaaattctcgtttggctgcctgtgagaaacagaaggaaaagataagtaaagag atggaaatgacccgacaagatattgacactcagaagatacaggaaaggtggttggaggat aatctcactttgaggaagcggaatgaagagctaaaagaagttgaagacaatataaaacaa cttatgaagcagatgggagaaatgaaagttccccagatgaaaaatgaccaaaaacatttg gaagagaaaatagaatctctgaaaaggaaccatcatgttgcacttggccgccagcgtggg tttgaagaggagattgttcgctttagaaaggagctcagagagccacaattcaaagatgca gaagaaaaatacagggacatgatgattgtcatgagaacaacagagctggtgaacaaagat ctggacctttattacaaggctcttgataaagcaataatgacatttcatagcatgaaaatg gaagaaattaataaaatcattcgggacctgtggcgaagcatttacagaggacaagatatt gaatatatagaaattcgctctgatgcagatgaaaatgtctcagccactgacaaaagaaga aattacaattacagggtagtaatggtgaagggagatacagcgctggatatgcgaggaaga tgtagtgctgggcaaaaggtgcttgcttctctaatcattcgtcttgctctagcagaaaca ttctgtctcaactgtggcattctggccctggacgagcccacaaccaaccttgaccgagaa aacatcgagtccctggcacatgccctggtggagataataaagagccgcttacaccaacgc aactttcagcttctggtgataactcacgatgaagattttgttgaacttctgggccgttct gagtatgtggaaacattctacaggataaagaagaacattgaccagtgctctgagatcatg aaatgcagtgtcagctctctaggctcctatgttcattag

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