Parus major (Great Tit): 107210851
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Entry
107210851 CDS
T04864
Symbol
SH3TC2
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmaj04131
]
107210851 (SH3TC2)
Membrane trafficking [BR:
pmaj04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
107210851 (SH3TC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
SH3_2
SH3_1
SNAP
TPR_1
TPR_2
Motif
Other DBs
NCBI-GeneID:
107210851
NCBI-ProteinID:
XP_033373582
Ensembl:
ENSPMJG00000006424
LinkDB
All DBs
Position
13:1723077..1737432
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AA seq
1329 aa
AA seq
DB search
MDLSGLEHSFWVVPDPQNPQADLQGCAPGGSQLRQDTHRLFHSISQQLCCVPSSPGKAGL
TEQSSPEAGHGSPDPSVVLLPLRHSFLPELSLSFSVESHSSRCLNSQLQEAARKKLWALE
SDDRDVCALFKELSARLVCMQAHEDRFLLTFKTLEEVWKFSTYLTLGYVGTCLEQLLFAQ
EFWLDCALVEDTELRVSVDEEHLATIYMDLLLQEGNFFCRAVPGAWKSEQEGEESLQLCR
NELIHVKSVGQDSRWEGMSLLTGQRGMVPVTALEPIPHPFYQWFLKNYAVSFGLSQEISG
TSSQAIVKGRCIATKDHRGAAWDELSFSKGDPIEIIGFFIPGLPWFVGKSLSTRSIGFVP
TRHVNPEPCQPLGKGFVFLSEEEKSPVLHIPCNGDEQHFATLLGDLAHTDITSVYRLAGF
EPTAVFPQVPPEAALHGSKEIQVLQSWEEINDWATSSTSELSSPGSETAPATLEDVLLEK
LDDLDYPKFFIDLNTGHMEDADVFDPILTFLNQDSFVPSFQSFYDLSFSFLQSTFYGFSD
EDELVLYLETSRNWAKRTRLVWAHVRLCFLLGKLCIKKLKLSQARVYFEEAMSVLDRGFG
DLPLLAALHVSLASVYLKQNMKHKFSSLLGKTLTLLVCLPGRSFSSESELELLTYILRES
IAVGNAPLEARVCFLIVKLFLQLGRTEEVLPFLEHLQCLSTTWLSPGSRGPLDAAATLGY
LYDKKCLPNLALASVRSFAPSSTKGTPTPIWRAGFILQNAPKLLGKQLDRSSIPALACLY
LKQALQFCCESRAVAMQRTLCAVLSRTYLQHGLLDGAVCYSARAAALGRLLGEEEAFESS
LSLGWMHLLQQRPGPAGDILRQLLRSLRGTASETQPGAVHNLLAMALGAQGHVQEAAENF
LRALHKAKETGNRRNQAVALANLGQLSLSCGAAQLAELYLLWSVRLYAELQGHQEPDLEL
AQVLLWLAQAMVDRQRMEDAKLCYELALGFALKWQNLRSQLHVTERLCHFCSRVCPDLQA
CIAYHEHWASLARQLQDRELEGNARQALSLLYQALGTPEALRQSLDCTKQSLRIFIDLEE
AVKAAEAWLQAGKLYYLLEEDELVEMYFQAAIQTALKGDNFSLAMDLYEKAGDTFFNGSR
NRARAVEFYRGGAVPLARKLKATQTELRLFNKLAELQISLQGYEKALEFATLAARLSLRV
GDHLQELVAFHRLATAYDLLHMYEMAEDCYLKTLAMRPPVLQSSAEALYYCKVYWHLGNL
ALHKLQDEQDAASYFLLALAAATELGDRELQSLLRAKLGAIPGAPGGPEGTPGCATERPR
WLTEGGHVV
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
atggatctctctggccttgagcacagcttttgggtggttccagacccacagaatccccag
gcagatctgcagggctgtgctcctgggggctctcagctgaggcaggacacccacaggctc
ttccacagcatttcccagcagctctgctgtgtcccctcctctccagggaaggctggcctg
acagagcagagcagccctgaggcaggacacggctccccggacccctctgtggtgctgctg
cctctcaggcacagctttctgccagagctctcactctccttctccgtggagagccactcc
tcccggtgcctcaattcccagctccaggaagctgccaggaagaagctgtgggctctggag
agcgatgacagggacgtctgtgccctgttcaaggagctgtcagccaggctggtctgtatg
caggcacacgaggatcgcttcctcctcaccttcaaaaccctggaggaagtctggaagttt
tccacttatctgactttagggtacgtgggcacctgcctggagcagctgctctttgcccag
gagttctggctggactgtgccctggtggaggacacggagctcagggtcagcgtggatgaa
gagcacctggccaccatctacatggatctgctcctccaggaagggaactttttctgcagg
gcagtgcctggagcctggaagtcggagcaggagggagaggagagtctgcagctctgcagg
aatgagctgatccatgtgaagagtgtgggacaggattccaggtgggaagggatgtccctg
ctgacgggacagcgaggcatggtgcccgtgacagctctggagccaatacctcaccccttt
taccagtggttcctgaagaattatgctgtgagttttggcctctcgcaggagatcagtggg
acgagctctcaggccattgtcaaaggcaggtgcatcgccaccaaggaccacagaggagca
gcgtgggatgagctgagcttctccaaaggagaccccatagaaatcatcggtttcttcatc
cctgggctgccctggtttgtgggcaaatccctcagcaccaggagcattggcttcgttccc
acccgacacgtaaatcccgagccctgccaacctctgggaaagggctttgtgtttctgagc
gaagaggagaagtcccctgtgctgcacatcccctgcaatggtgacgagcagcactttgcc
accctcctgggggacctggcgcacactgacatcacctctgtctacaggttggctggcttt
gaacccacagccgtgttcccacaagtgccaccggaggctgctctccatggcagtaaagaa
atccaagtgctccagtcttgggaggaaatcaatgactgggctaccagcagcacctcagag
ctgtccagcccaggcagtgaaacagcccctgccacactggaagatgttctcctggagaag
ctggatgacttggactaccccaaattcttcattgacctcaacactggacacatggaggat
gctgatgtctttgatcccatattgactttcctcaatcaagacagtttcgtgcccagtttc
caaagcttttatgatctcagcttttcctttctgcagtccactttttatggcttctctgat
gaggatgaactggttctgtacctggagacttcccggaactgggccaagaggactcgtttg
gtttgggctcacgtcaggctctgtttcctcctgggcaagctctgcatcaaaaagctcaag
ttgtcccaggctcgggtgtactttgaggaggccatgagtgtcctggacaggggctttggg
gacctgcccctgctggcagcgctgcacgtgagcctcgcctccgtctacctgaagcagaac
atgaagcacaagttctcctccctgctggggaagacgctgaccttgctcgtgtgcctgcct
ggccgctccttcagctcggagagcgagctggagctcctgacgtacatcctgagggaatcc
atcgctgtgggcaacgctccgctggaggcccgcgtctgcttcctcattgtcaagctcttc
ctgcagctgggcagaaccgaggaggtgctgccctttttggagcatctccaatgtctcagc
accacctggctcagcccaggctcccgtgggccactggatgccgctgccaccttgggctac
ctctatgacaagaagtgcctgccaaacctcgcgctggcctctgtcaggtcctttgctccc
agcagcaccaaggggacaccgacccccatctggagagctggcttcatcctccaaaacgct
cccaaactcctggggaagcagctggacaggagcagcatcccagcgctggcttgtctgtac
ctcaagcaagcgctgcagttctgctgcgagagcagggccgtggccatgcagaggacgctc
tgcgccgtgctgagcaggacgtacctgcagcacgggctgctggacggggctgtttgctat
tcagccagagctgcagccctgggcaggctgctgggggaggaggaggcttttgagtcctcg
ctgtccttggggtggatgcacctcctgcagcagcggccgggcccggctggggacatcctg
cggcagctgctgcgctccctgcgcggcaccgccagcgagacccagcccggggccgtgcac
aacctcctggccatggccctcggggcccagggacacgttcaggaggctgcagagaacttc
ctgagggccctgcacaaggccaaggagacggggaacaggaggaaccaggccgtggccctg
gctaacctgggccagctgagcctctcgtgtggggccgcccagctggccgagctctacctg
ctgtggtcggtccggctctacgccgagctccagggacaccaagagccggacctggagctg
gcacaggtgctgctgtggctggcacaggccatggtggacaggcagaggatggaagatgcc
aaactctgctatgaactggcgctggggtttgccctgaagtggcagaacctgaggagtcag
ctgcacgtcacggagcgtctgtgccatttctgcagcagagtgtgccccgacctgcaggcc
tgcatcgcctaccacgagcactgggcgtccctggcacggcagctgcaggacagggagctg
gagggcaatgccaggcaggccctcagcctgctctaccaggctttgggcacacctgaggct
ttgagacaatccctggactgcaccaagcagagcctgaggatcttcatcgacctcgaggag
gctgtgaaggcagcagaggcctggctgcaggcaggaaaactctattatcttctagaggag
gatgagctggtggaaatgtacttccaggcagccatccagactgctctgaaaggggacaac
ttctccttggccatggatctttatgagaaagcaggtgacaccttctttaatggcagccgg
aacagggcccgagcagtggagttttacaggggaggtgctgtgcccttggccaggaaactc
aaggccacccagacagagctgcggctgttcaataaactggcagagctgcagatcagcctg
cagggctacgagaaggctctggagtttgccacgctggcagccaggctcagcctcagggtc
ggggatcatctgcaggagctggttgccttccaccgcctggccacagcctatgacttgctg
cacatgtacgagatggccgaggattgctacctgaagaccctggccatgcgtccccccgtg
ctgcagagctcagcagaagctctgtactactgcaaggtctactggcacctgggcaacctg
gctctgcacaagctgcaggatgaacaggatgcagcctcctacttcctgctggccctcgcc
gcagccaccgagctgggagaccgggagctgcaatccctgctccgtgccaagctgggtgcc
atccccggagccccagggggacctgagggcaccccaggctgtgccacagagcggccccgg
tggctgaccgaaggtggccacgtggtgtga
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