Parus major (Great Tit): 107210904
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Entry
107210904 CDS
T04864
Symbol
GABRA6
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj04080
Neuroactive ligand-receptor interaction
pmaj04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
107210904 (GABRA6)
04082 Neuroactive ligand signaling
107210904 (GABRA6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmaj04040
]
107210904 (GABRA6)
Ion channels [BR:
pmaj04040
]
Ligand-gated channels
GABA-A
107210904 (GABRA6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Cyclin_N
DUF4396
Motif
Other DBs
NCBI-GeneID:
107210904
NCBI-ProteinID:
XP_015497782
Ensembl:
ENSPMJG00000014518
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All DBs
Position
13:11287844..11312816
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AA seq
516 aa
AA seq
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MALLLAWTCVAVSLGTALGDQGDGADLYSENITRILDKLLDGYDNRLRPGFGGAVTEVKT
DIYVTSFGPVSDVEMEYTMDVFFRQTWTDERLKFSGPTEILRLNNLMVSKIWTPDTFFRN
GKKSIAHNMTTPNKLFRIMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYP
KSEIIYTWKKGPLHSVEVPQESSSLLQYDLIGQTVSSETIKSNTGEYVIMTVYFHLQRKM
GYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGEYSLQLLYFHLQRKIGYYLIQTYI
PCIMTVVLSQVVFWINKESVPARTVAGITTVLTMTTLSISARHSLPKVSYATAMDWFIAV
CFAFVFSALIEFAAVNYFTNLQTQRAMRKAARAAALAAALSAATVPAEDEIVSHSDSNSN
LKKRVNSIASQAEQSPEPSIISNTASQCQPLSVPPPAPPQPPAIGGASKIDQYSRILFPV
AFAGFNLVYWVVYLSKDTMEFFEPLAMHFQNDPQPN
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggctctgctgctcgcctggacgtgtgtcgctgtgagcctggggacggcgctgggggac
caaggcgacggggcggacctctattcggaaaacatcactcggatcctcgacaagttgttg
gacggctacgacaacaggctccgaccgggatttggaggcgccgtgacagaagtcaagacc
gacatctacgtgaccagtttcgggccggtgtccgacgtggagatggaatacacaatggat
gtcttctttcgtcagacgtggactgatgagaggttgaagtttagtgggccaactgaaatt
ttgagactgaacaatttaatggtcagtaaaatttggacaccagacacattttttagaaat
ggaaaaaaatcaattgctcacaatatgacaactcctaacaaacttttcagaattatgcag
aatggaactattctttacacaatgagactaaccattaatgctgattgtcctatgcggttg
gtgaacttcccaatggatggacatgcttgtccactgaaatttggaagctatgcttatcca
aaaagtgaaataatttatacttggaaaaaaggaccattgcattcagtagaagtaccacag
gagtcttccagtcttctccagtatgacctcataggacaaactgtatctagtgaaacaatt
aaatctaacacaggtgaatatgtaatcatgacagtttatttccacttgcaaaggaagatg
ggctacttcatgatacagatatacactccttgcattatgacagtcattctttctcaggtg
tctttctggattaacaaggagtctgttccagccaggacagtttttggtgaatattcactc
cagctgctctatttccatctgcaaaggaaaataggctactatctcattcagacatacatt
ccatgcatcatgactgtggtcttgtctcaggttgtgttttggatcaacaaagaatctgtt
ccagcaagaaccgtggctggaatcactacagttctcacaatgaccactttaagcatcagt
gctcgccattctctgcccaaggtgtcctatgccaccgccatggattggttcatagctgtg
tgctttgcctttgtcttctctgcacttattgagtttgcagctgtcaactacttcaccaat
ctccagactcagagagcgatgaggaaggcagccagggcagcagcactggcagcagcacta
tcagcagcaactgtaccggcagaggacgagattgtctcgcattctgactccaactctaac
ctgaagaagcgagtaaactccatagcatctcaggcagagcaatctcctgaacccagcata
atatcaaatactgcatcccagtgtcaaccactgtctgttcctccaccagccccaccacaa
ccaccagctattggaggtgcaagtaaaatagaccagtattccaggatcctctttccagtg
gcttttgcaggattcaacctggtgtactgggttgtttatctttcaaaagacactatggag
ttttttgaacctttggcaatgcattttcaaaatgaccctcagcccaactga
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