Parus major (Great Tit): 107211018
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Entry
107211018 CDS
T04864
Symbol
GSPT1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107211018 (GSPT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmaj03019
]
107211018 (GSPT1)
03012 Translation factors [BR:
pmaj03012
]
107211018 (GSPT1)
Messenger RNA biogenesis [BR:
pmaj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
107211018 (GSPT1)
Translation factors [BR:
pmaj03012
]
Eukaryotic type
Release factors
107211018 (GSPT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
CTLH_Armc9
Motif
Other DBs
NCBI-GeneID:
107211018
NCBI-ProteinID:
XP_015497925
Ensembl:
ENSPMJG00000010455
LinkDB
All DBs
Position
14:7207990..7230552
Genome browser
AA seq
505 aa
AA seq
DB search
MEISESVVENGETEMSPEESWDHKEEPSEAELGGGPAGDAGPSEESAQEMMEEEEEIPKP
KSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRET
WYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAV
LVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYEECKEK
LVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSEFCPWYIGLPFIPYLDNLPNFNRSVDG
PIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKHNVEVLGILSDDVETDSVAPGE
NLKIRLKGIEEEEILPGFILCDLNNLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCI
EEVEITALICLVDKKTGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLR
DEGKAASAAGTDCCKNLLELGAAWQ
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggaaatttcagaatctgttgtggaaaatggagagacagaaatgtccccagaagagtca
tgggaccacaaagaagaacccagtgaagcagagctaggaggtggtcctgcaggggatgcg
gggccttctgaagagagcgctcaggaaatgatggaagaggaggaggaaataccaaaaccg
aaatctgttgtagcacctccaggtgctcctaaaaaagagcacgtaaatgtagtattcatt
ggacatgtagatgctggcaagtcaactattggaggacaaataatgtatttgacaggaatg
gttgacaaaagaacacttgaaaagtatgaaagagaagctaaagaaaaaaacagagaaaca
tggtacctttcatgggccttagacacaaaccaagaagaacgagacaaaggtaaaacagta
gaagtgggtcgtgcctattttgaaacggagaagaaacacttcactattttagatgctcct
ggacacaagagctttgttccaaatatgattggtggggcttctcaagctgatcttgctgtg
ctggttatttctgcaagaaaaggagagtttgaaactggatttgagaaaggtggacaaaca
agagaacatgccatgttagcaaaaacagcaggtgtaaagcatttaatagttcttattaat
aaaatggatgatccaactgtaaactggagtaatgaaagatatgaggaatgtaaagagaaa
ctggtgccatttttgaagaaagttggcttcaatcccaaaaaggacattcatttcatgccc
tgctcaggactgactggagcaaaccttaaagaacagtcagaattctgtccttggtatatt
ggattaccatttattccatacctggataatttgccaaacttcaaccgttcagttgatgga
ccaatcaggctgccaattgtggataaatataaggacatgggcactgtggtccttgggaag
ctggagtcaggctctatttgcaaaggacaacagcttgtgatgatgccaaacaagcacaat
gtggaagttcttggaatcctttctgatgatgtagaaactgactcagtagctccaggtgaa
aatctaaagatcagactgaagggaattgaagaggaagagatacttccaggatttattctc
tgtgatctcaacaacctttgtcattctggacgcacgtttgacgcccagatagtgataatt
gagcacaaatccattatctgcccaggttataatgcagtgctgcacatccacacctgtatt
gaagaagttgagataacagccttaatctgcttggtagacaaaaaaacaggagagaaaagt
aagacacggccccgttttgtgaaacaagatcaagtctgcattgcccgtttaaggacagca
ggaacgatctgccttgagacattcaaagatttccctcagatgggtcgcttcactttaagg
gatgagggtaaggctgcttcagcagcaggtactgactgctgcaaaaacttacttgaactt
ggagctgcatggcagtga
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