Parus major (Great Tit): 107211041
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Entry
107211041 CDS
T04864
Symbol
PMS2
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03430
Mismatch repair
pmaj03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
107211041 (PMS2)
03460 Fanconi anemia pathway
107211041 (PMS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmaj03400
]
107211041 (PMS2)
DNA repair and recombination proteins [BR:
pmaj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
107211041 (PMS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
DUF5741
Motif
Other DBs
NCBI-GeneID:
107211041
NCBI-ProteinID:
XP_015497965
Ensembl:
ENSPMJG00000017189
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All DBs
Position
14:9249933..9261765
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AA seq
871 aa
AA seq
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MEAAAPCPQPAGTIRPIDRGSVHRICSGQVVLNLGTAVKELVENSLDAGATNIDIKLKDH
GAELIEVSDNGGGVEEENFEGLTLKHYTSKIQDFSDLIHVETFGFRGEALSSLCALSDVT
IFTCHKSAKVGTRLVFDHNGKITQKTHFPRQQGTTVSIQQLFYTLPVRHKEFQRNIKKEY
AKMVQLLQAYCIVSKGVRINCTNQVGQGKKSCVISTAGSPSLKENIGAVFGQKQLQSLIP
FVQLPPSEAVCEEYRLNPDDMPQNLYSITGFISRCDHGVGRSTTDRQFFFINQRPCDPAK
VVKIVNEVYHLHNKHQYPFVVLNIGVDSECVDINVTPDKRQILLQEEKFLLAILKTSLME
MFGSDVNKLNVNQKLLDVAGNLKKTLLEETEKPQAEVLSDSETENPSGEGKRIMTLARLR
ESFSLHQATESNFQSSKKVKQQHSFPRQRLLDTTGSTVKIQKAILTKEAESCHKSDSEVS
VPMRHLRKLEDTADSGFCSISESDAGCSTPEAGSFISSESAINSEEEFCSTEEQMQKECL
KTAGCSKKSLDCDVQVLGTEPKLNQVNDWTDQNKLSQEANSCSPRVKRFKSRNFKSKADD
SKAGKYPEVKNTSVDVLVEVKKKIVPLEFSMKVLAEKVKKVIQQQQKNTETENYRRFKAK
ISPGDNKVAEDELRKEISKEMFAKMEIIGQFNLGFIIAKLNSDLFIIDQHATDEKYNFEM
LQQHTVLQGQKLIVPQNLNLTAVNETVLIENLEIFRKNGFDFIINENAPVTQRVKLISLP
TSKNWTFGPQDIDELIFMLSDCPGVMCRPSRVRQMFASRACRKSVMIGTALNVQEMRKLI
THMGEIEHPWNCPHGRPTMRHIVSLDLISPE
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggaagcggctgcgccctgcccgcagcccgccgggaccatccgacccatcgaccgcgga
tctgtccatcgcatctgctcggggcaggttgtactgaacctcgggactgccgtgaaagag
ctggtggaaaacagcctggatgccggagctaccaacatcgatataaaacttaaagatcat
ggagcagaactgatagaagtttcagataatggaggtggagtggaagaggaaaactttgaa
ggcttgactctgaagcattacacatcaaagatacaagatttttctgatctaatacatgtt
gaaacatttgggtttcgaggtgaagctttgagttcactgtgtgcattaagtgatgttacc
attttcacctgtcataagtcagcaaaggttgggactcgtttggtgtttgatcacaacggc
aaaattactcagaagactcatttcccacgacagcaaggaacaactgtcagcatccagcag
ctgttttatacgttaccagtgcggcataaagagttccaaagaaacatcaaaaaggaatat
gcaaaaatggtccagctgttacaggcctactgtattgtttccaaaggagtgcggattaac
tgcactaatcaagttggccaagggaaaaaaagttgtgtgatatccactgctggaagtccc
agtttaaaggagaacattggagcagtatttggacaaaaacagttgcagagccttattcct
tttgttcagcttcctcctagtgaagctgtgtgtgaagaatatcgactcaaccctgatgac
atgccacaaaatctttatagtattactggcttcatttctcgttgtgatcatggtgttggg
aggagtacaacagacagacagttcttctttatcaatcaacgtccctgcgatccagcaaag
gttgtgaagattgtgaatgaagtttatcacttacacaataaacaccagtatccatttgtt
gtccttaacattggggtagattctgagtgtgttgacatcaatgtaactcctgacaaaagg
caaattttacttcaggaggaaaagtttttattagcaattctaaagacttctctgatggag
atgtttggtagtgatgttaacaaactgaatgtcaatcagaaacttctggacgttgcaggt
aacttgaagaagacacttcttgaagagacagaaaagcctcaggcagaagtgctgtctgac
tctgagactgaaaatccaagtggtgaaggcaaaagaataatgactcttgccagattaagg
gagtcattctctctccatcaagctacagaaagtaattttcaaagctctaaaaaggtaaaa
cagcagcacagtttccctagacagaggttactcgataccactgggagtactgtaaagatt
caaaaggctatcttgactaaggaggctgagagttgtcataagtcggactcagaggtgtca
gttccaatgagacacttgagaaaattagaagatactgcagattctggattctgtagcatt
tctgagtcagatgctggatgtagtacaccagaagctggaagcttcatcagtagtgaaagt
gcaattaattctgaagaagaattctgtagcacagaagaacagatgcagaaggaatgtctt
aaaactgctggatgtagtaagaagtcattggactgtgatgttcaggtcttgggcactgaa
cccaagctaaatcaagtgaatgactggactgatcaaaacaagttatctcaagaagccaat
agttgttccccaagagtaaaacgttttaaaagcagaaactttaaaagtaaagcagatgat
tccaaggcaggtaaatatcctgaagtgaagaacactagtgttgatgtactggtggaagtt
aaaaagaaaattgtgcctcttgaattctctatgaaggttttggcagaaaaggtaaaaaaa
gtaatacagcagcaacagaaaaacacagaaactgaaaattacagaagatttaaagcaaaa
attagtcctggggacaataaagtagcagaagatgaattaagaaaagagataagtaaagaa
atgtttgcaaagatggaaatcattggccagttcaatttagggtttataatagcaaagttg
aattctgatcttttcataattgaccaacatgctactgatgagaaatataactttgagatg
ttgcaacaacacactgttctccaaggtcagaagctgatagtgcctcaaaatctcaatcta
acagcagtaaatgaaacggtattgattgaaaacctagaaatattcagaaaaaatggcttt
gattttatcataaatgaaaatgctcctgtaactcaaagagttaaattgatatcgttgcca
acaagcaaaaactggacttttggtccacaagacatagatgagctgatcttcatgttgagt
gactgccctggagtgatgtgcaggccctccagggtcagacagatgtttgcttctcgagct
tgcaggaagtctgtgatgattggaactgcactgaatgtgcaggaaatgagaaaactgatc
acccatatgggtgagattgaacatccctggaactgcccccatggaaggcctactatgaga
catatagtcagtttagacttgatttcaccagaataa
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