Parus major (Great Tit): 107211087
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Entry
107211087 CDS
T04864
Symbol
IFT88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pmaj03037
]
107211087 (IFT88)
Cilium and associated proteins [BR:
pmaj03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
107211087 (IFT88)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_7
TPR_19
TPR_14
TPR_8
TPR_6
TPR_16
ANAPC3
TPR_11
TPR_10
ARM_TT21_4th
TPR_17
TPR_9
TPR_CcmH_CycH
TPR_15
TPR-S
ARM_TT21_5th
ARM_TT21_C
HEAT_Nup120
DUF2989
TPR_21
HAT_PRP39_C
NatA_aux_su
Motif
Other DBs
NCBI-GeneID:
107211087
NCBI-ProteinID:
XP_015498085
Ensembl:
ENSPMJG00000017602
LinkDB
All DBs
Position
1:complement(71128971..71171239)
Genome browser
AA seq
816 aa
AA seq
DB search
MMQNVHLSPENKEDDLYSGYNDYNPMFDTEDLENDVAFQQAARTSHGRRPPVTAKIPGTS
SPRPLATGFGSKATLTSSMGRPMTGAIQDGVSRPMTAVQAAGYTKAAVRGSSFDPLGQAR
GPASPLEKKTLDSLEEKMRQLEKKVNELVEESCVANSCGDLKLALEKAKEAGRQERELLR
QREQIAPPEGINLDLTYTVLLNLASQYVANEMYAEALTTYQVIVKNKMFSNGGILKVNMG
NIYLKQRNYSKAIKFYRMALDQITSSHKQMRIKIMENIGVAFIKTGQYVDAISSFEEIMS
ISPNLKAGFNLILCYFAIGNGEQMKKAFKNLIEVPLEVDYEDKYISLNDDLHMNLLIEAM
KNDSLSQIERERKSLAEEYIMTAAKLIAPAIETSFAVGYDWCVDVVKASHYVELANDLEI
NKATTYLRQQNFNQALETLKMFEKKDSRVKSAAATNLSFLYYLGNELEQATNYADLAVNS
DRYNPAALTNKGNTVFANGDCEKAAEFYKEALRNDSLCTEALYNLGLVYKKLNRIDEALD
CFLKLHAILPNSAQVLYQLASIYQIMEDPNQAIEWLLQLISVVPTDPYVLSKLGNLYDTE
GDKSQAFHYYCESYRYFPSNIEVIEWLGAYYIDTQFCEKAIEYFERAALILPTQVKWQLM
VASCYRRSGNYQKALEKYKVIHRKFPENVECLRFLVRLCTDMGLKEVQEYITKLKKAEKL
KEIREQRIKSGRDGSARSRREGSGDSGGTKCERLSAKLKALPGASEPYESSSSKEIDASY
ADPLGPQPERPKTAARKRTEEDDFADEELGEDLLPE
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaaatgtgcatctgtctcctgagaataaagaagatgatctctattctggctac
aatgattataatcccatgtttgacacagaggatttagaaaatgatgtagcttttcaacag
gcagcaagaacaagtcatggaagaaggccccctgtgacagcaaaaattcctggtacatca
agtccaagacctctagctactggatttgggtcaaaggcaactttaacttcatctatggga
cgacccatgacaggagctatacaggatggagtttctcgaccaatgacagcagtgcaagct
gcaggttacactaaagctgctgtgagaggttcttcatttgatcctctcggccaagcaaga
ggtcctgcttcacctctggaaaagaaaactttagacagtttagaagagaagatgaggcag
ttggaaaaaaaagtgaatgaactggttgaagaaagctgtgttgccaatagttgtggagac
ttgaaattggctctggagaaagcaaaagaggctggaagacaggaaagagaattgttgaga
caacgtgaacaaatcgctcctccagaaggtatcaacttagacctcacttacacagttctc
ctcaatctggccagtcaatatgttgctaatgaaatgtatgctgaagcactgactacttac
caagttatagtgaagaataagatgttcagcaatggaggtatactgaaggtaaatatggga
aatatatatttaaaacaacggaactattccaaagctatcaaattctaccgtatggctctg
gaccagattactagttcccacaaacagatgaggataaaaataatggaaaatattggagtt
gcatttattaaaactggccaatacgttgatgccatttcttcatttgaagaaataatgagc
atatccccaaacttgaaggctggcttcaacctgattctatgttactttgctattggaaat
ggtgagcaaatgaagaaagccttcaaaaacctcattgaagttcccttggaagtggattat
gaagacaaatacatttcattaaatgatgatctacatatgaatctactgattgaagccatg
aaaaatgacagcttaagtcaaatagaacgtgaaaggaagtccttggcagaggaatacatc
atgacagctgctaaactcattgcaccggcaattgagacatcttttgccgtaggctatgac
tggtgtgttgatgtggtgaaagcttcccactatgtagagttagccaatgatctggaaata
aataaagccactacttacttgaggcaacagaattttaaccaggcattggagaccttgaaa
atgtttgaaaagaaggatagcagggtaaagagtgcagctgcaacaaatctttcattcctt
tattatttggggaatgaattggaacaagcaactaactatgcagatttagctgtaaattct
gataggtacaatccagcagctctaactaacaaaggaaatactgtttttgcaaatggagac
tgtgaaaaagcagctgaattttataaagaagctctcaggaatgattccttatgcactgaa
gcactttataatcttggtttagtttacaagaagttaaacaggatagatgaagctttggat
tgttttctgaaactccatgcaatccttccaaatagtgcccaagtcctttaccagctagca
agcatataccagatcatggaagatcccaatcaagccatagagtggctgctgcagttgatc
agtgtagtaccaactgatccatatgtactctcaaagctagggaatttatatgatactgaa
ggtgataaatcccaagcttttcattattattgtgagtcataccggtatttcccttccaac
attgaggtcattgaatggcttggagcgtattacattgacacccagttctgtgaaaaagcc
attgagtactttgaaagggcagcacttatcctgccaacacaagtgaagtggcagctgatg
gttgccagttgctacaggagaagcggcaactaccagaaagctctggagaaatacaaagtc
attcacaggaaattcccagagaatgttgaatgccttcgatttttagttcgtctctgcaca
gacatggggctgaaagaagtgcaggaatatataacaaagctcaagaaagcagaaaaatta
aaagaaataagagaacagcgcattaaatctggcagagatggcagtgcacgtagccgcaga
gaaggaagtggtgatagtggtggtaccaaatgcgaaagactgagtgccaaactaaaagct
ctgcctggagcaagtgaaccctatgaaagcagcagcagtaaagaaatagatgcctcctac
gcagatccacttggcccgcaaccagaaagaccaaaaacagcagcaagaaaaagaacagag
gaagatgattttgctgatgaagaactaggagaggatctgcttccagaatag
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