Parus major (Great Tit): 107211169
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Entry
107211169 CDS
T04864
Symbol
TNRC6A
Name
(RefSeq) trinucleotide repeat-containing gene 6A protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmaj03019
]
107211169 (TNRC6A)
03036 Chromosome and associated proteins [BR:
pmaj03036
]
107211169 (TNRC6A)
Messenger RNA biogenesis [BR:
pmaj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107211169 (TNRC6A)
Chromosome and associated proteins [BR:
pmaj03036
]
Eukaryotic type
Gene silencing
piRNA pathway
107211169 (TNRC6A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_1
RRM_occluded
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
107211169
NCBI-ProteinID:
XP_015498338
Ensembl:
ENSPMJG00000019495
LinkDB
All DBs
Position
14:15546673..15588398
Genome browser
AA seq
1965 aa
AA seq
DB search
METNTTFCSRELEAKATKEVERKLSRAFLPHLCGTERRDLVQEEEEQLMEERKKRKEDKK
KKEAAQKKAIEQKIKVPEQTKTSVSQPQPVTSNGTSTGTSTTNNAKRAPASSQQQPLPRY
PPREVPPRFRHQEQKQLLKRGQQLPVIAANLGSTPKVLNGQSGGSTGTNNQPVTNGEVPN
SSKKQPGMPPIRDLVSHSPNQSDLNHSGLGSHYENSHWGPVSSNSDSSTNWDKVIVDGSD
KEAWPSITGSDPELTSECMDTDSASSSGSERNLVIMASGSTGGEGDGIRNGIGHGSQNKF
VVGSNSNNVGNGSISGPWGLSHGSIISTCQVSVDAPDSKSESSNNRMNAWGTINSSSNGG
LNPSTLNSNGNHGAWSVLENSGHALKGSVGSGSPGTSIQCSTIGQMANSQSINSKVGGSA
HSSWGSLQESCDSEVNGTRNVSFSGQPQNLNTEMNGPNNTTNFMTSSLPNSAGSVQLNEL
PNTAGPGAWRVSTMNHSQIQASPVANGTSISHLSNGEAKTGGSYGTTWGAYGSSYSGDKC
PGPNSQANGDTVNATLMQPGGSGPGSTNFQISGNKGGGVWEAGTVNSQNVPWGNGNGASA
GGSRRGWGNPAQSTGTNISNGEWSKLPSNQHSNEGMNGNSRKFTNGWKSTEEDDLNSQSS
AASQMAEQNSTWAKTGTGDSEGSSESAGCHEDRAATEGQNRERRKVDQHTLLQSIVNRTD
LDPRVLSNSGWGQTPIKQNTAWDTETSPRGERKTDNGTEAWGGSVAQTSSSGGCVDRPSP
NNNDTSSVSGWGDPKSATRWGDSKGSNSQGGWEEDSAATVMVKSNQSWGSGKEEKSSWND
TPKMKQGWGDGQKASQGWAVSAGDSWGENSRSNHWGEAKKSSSGGSNSDRSVSGWNEPGK
SNSVSWGGNNVTPNNSSGWDEPAKSNQSQGWGDPPKSNQPQVWGDSSKPINSPEWNKQDV
GSWGAPSATNKPPGSGWLGGPMPAPAKEEEPTGWEEPSPESIRRKMEIDDGTSAWGDPSK
YNYKNVNMWNKNVPNSSSSSDQQAQVHPQLLSSSAMSSKESSSGSGWGEPSAPATTVDNG
TSAWGKPMDTGTSWGEPVSDAGGTSGWGNASLGQQPPNKPGPKSMQDSWCGDDMPLTGSR
QTSWEEEEDVEIGMWNSSSSQEANPALNWPPYMKKMPTKGIMKGGNKQDETWINPFIKQF
TNLSFSRESPEETIQSNKMDMSGGLLQDKRMEMDKHGLGVGDYNRVVGKGPGSRPQIPKE
SSMDRGPYFDKDGIVADESQNMQFMSNQNMKLPPSNNALPNQALGSLAGLGMQSLNSVRQ
NGNPSVFGVGNIAAQPRSMQQPPAQPLNSSQPNPRAQVPPPLLSPQVPVSLLKYAPNSGG
LSPLFGPQQVAMLNQLSQLNQLSQISQLQRLLAQQQKAQPQRSVPSGGRQQQEQQGRSLS
MQQQMMQQSRQLDPNLLMKQQTPPSQQQSLHQPSMKSFLENVIPHTTPELQKGPSPINAF
SSFPIGFCPISTSEIPGMNSNLNVNLDMSSIKEPQSRLRKWTTVDSISMNTSLDQNSSKH
GAISSGFRLEDSPFVPYDFLNSSNSPASPPGSIGDGWPRAKSPNGSSSVNWPPEFRPGEP
WKGYPNIDPETDPYVTPGSVINNLSINTVREVDHLRDRNSGSSSSLNTTLPSTSAWSSIR
ASNYNVSLSSTAQSTSVARNSDSKSTWSPGSVTNTSLAHELWKVPLPPKSITAPSRPPPG
LTGQKPPLSTWDNSLRLGGGWGNSDARYTPGSSWGESSSGRITNWLVLKNLTPQIDGSTL
RTLCMQHGPLITFHLNLPHGNALVRYSSKEEVVKAQKSLHMCVLGNTTILAEFASEEEIS
RFFAQGQSLTPSPGWQSLGSSQSRLGSIDGSHSFSNRNDLNHWNGAGLSGTSSGDLHGTS
LWGSPNYSTSLWGAPSSNDTRGISSPSPINAFLSVDHLGGGGESM
NT seq
5898 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccaataccactttctgttccagagaattggaagctaaagctaccaaagaagtc
gaaagaaaactaagcagggctttcctgcctcatttatgtggaactgagagaagggattta
gtgcaagaagaggaagaacagttgatggaagaaaggaaaaagagaaaagaagacaagaag
aagaaggaagctgctcaaaaaaaggccattgaacaaaaaatcaaagtgccagaacaaacc
aagacaagtgtaagccagccccagcctgtcacctccaacggcacttccacaggaaccagc
actactaataatgccaagcgggccccagccagcagccagcagcagcccttgcctcgatac
cctcctcgggaagtaccaccgcgattccgacaccaggaacagaaacagcttctgaaacga
gggcagcagttaccagtgatagctgcaaacctgggatccactcccaaagtgttaaacggc
cagtcaggaggcagcactggcaccaataaccagcccgtgaccaacggagaagtgcccaac
agcagcaaaaaacagccaggcatgcctcccattcgggacttggtgagccactcccctaac
cagtcagatctgaaccacagtggtctaggatcccattatgaaaattctcactggggacca
gtctcttcaaatagtgactccagcacaaactgggataaagttattgtagacggctctgac
aaagaagcatggccatcaatcactggcagtgacccagagctgacttcagaatgtatggac
actgactctgcctccagctctgggtcggagcggaacctcgttatcatggcttcagggagc
acaggcggagaaggcgatggcattcgcaatggcatcggacatgggtctcagaataagttt
gtggttggtagcaacagcaataatgtgggcaatggaagtattagtgggccgtgggggttg
tcccatgggtccataataagcacatgtcaagtttctgtggatgctcctgacagcaaatct
gaaagtagcaacaatagaatgaatgcttggggcaccataaactcttcatcaaatggaggg
ttaaatccaagcactttgaattcaaatggcaaccatggtgcctggtccgtgttggagaac
agtggacatgccctgaaagggtccgtggggagtgggagtcctggcacaagcattcagtgc
agtaccataggtcagatggccaacagccagagtattaactcgaaagtgggtggctcagcc
cacagttcctggggaagccttcaggaaagttgtgattctgaagtaaatggtacaaggaat
gtttcattcagtgggcaacctcaaaaccttaacactgaaatgaatggaccaaataacact
actaactttatgacctctagtttaccaaactctgctggttcggtgcagctgaacgaactg
cccaacactgcagggcccggggcctggcgcgtgagcacaatgaatcattctcagattcag
gcctctccagtggcaaacggcacttccatctctcacctgagcaacggtgaggccaaaacc
ggcggctcttatggtactacctggggtgcctatggctctagttactctggagacaaatgt
ccaggcccaaacagccaagctaatggtgacactgtgaatgcaactctaatgcagccgggc
gggagcgggcctggcagcactaactttcaaatcagcgggaataaaggcggaggggtgtgg
gaggcagggacagtcaactcccagaacgtgccgtggggaaatgggaatggtgcgagtgct
ggagggagcagaagaggatggggcaaccctgcacaaagcactggcaccaacatttccaac
ggggaatggagcaaactgcccagcaatcagcattccaatgaaggtatgaatggaaacagc
aggaagtttacaaatgggtggaagtctactgaggaggatgatctcaacagccagagttct
gctgcctcccagatggctgagcagaacagcacatgggccaaaacaggtacgggggacagc
gaggggagctcggagagcgccgggtgccatgaggacagagcggctacggaaggccagaac
cgagagaggaggaaagttgaccagcacacgttactccaaagcatagtgaacagaactgac
ttagatccacgtgtcctttccaactctggttggggacagactccaatcaaacagaacact
gcctgggataccgaaacatcaccgaggggtgaaagaaaaactgacaatgggacagaggcc
tgggggggctctgtggcacagacttccagctcaggggggtgtgtggatagacctagccct
aataataacgatacctcatctgtatcggggtggggagatccaaagtctgctacaaggtgg
ggagactccaaagggtcaaacagccaaggggggtgggaagaagattctgctgctacagta
atggtcaagagcaatcaatcgtgggggagtggcaaagaggaaaaatcatcctggaatgac
acaccgaagatgaagcagggatggggagatggacagaaggccagccagggttgggcagtg
tctgctggtgatagctggggtgaaaactctagaagcaaccactggggtgaggcaaagaaa
tccagttctggaggcagcaacagcgacaggtcggtgtctggttggaacgagccgggtaaa
tcaaattctgtttcttggggaggcaataatgtaaccccaaacaactcttcaggatgggat
gagcctgcaaagtctaatcagagccagggctggggagaccctccaaaatccaatcagcct
caagtctggggggactcatcgaagccaatcaactctcctgagtggaacaaacaagatgtt
ggctcttggggagccccgtctgccacgaacaaacccccggggtccggctggctggggggg
ccaatgccagccccggcaaaggaggaagagcccacgggctgggaggagccatcccccgaa
tccatacgcaggaagatggagattgatgatggaacttctgcttggggtgatccaagcaaa
tacaactacaaaaatgtgaatatgtggaataaaaatgtccctaacagtagcagcagttca
gaccagcaagcacaggtacatccgcagctactgtcttcaagtgccatgtctagcaaggag
agcagttcgggttctggttggggagagccttctgctccagccactactgtagataacggg
acttcagcgtggggcaagcccatggacactggtacgagctggggagagcctgtcagcgat
gcaggaggcacctctggctggggaaacgcttctcttgggcagcagcctccaaataaacct
gggcctaaatctatgcaagatagttggtgtggagatgatatgccattgactggcagtcgt
cagaccagctgggaggaagaggaggatgttgagattggaatgtggaacagcagttcctca
caagaagctaacccagcattaaactggccaccctacatgaaaaaaatgcccacaaaggga
ataatgaaaggtggaaataagcaagatgaaacatggatcaatccattcattaagcaattc
acaaatctcagtttttcaagagaatcaccagaagaaaccatacagagcaataagatggac
atgtctggagggttactgcaggacaagcggatggagatggacaagcacggcctgggcgtg
ggagattacaatcgtgtggttggaaaaggccctggttctcgtccccaaattcccaaagag
tcttccatggatcgcggtccttacttcgataaggatggcattgtagcagacgagtcccaa
aacatgcagtttatgtccaatcaaaacatgaagcttcccccttcaaataatgcactacct
aaccaagccctgggctccctagcagggctgggtatgcaaagcttgaattctgttagacag
aatggcaatcccagtgtgtttggtgttgggaatatagcagcacagcccaggagcatgcag
cagcctccagcacaacctcttaattcatctcagcctaatccacgtgctcaagtgcctcct
ccattactatcccctcaggttccagtatcattactgaagtatgcaccaaacagcggtggc
ctgagcccactttttggcccacaacaggtagccatgttgaatcaactgtcccagttaaac
cagctttctcagatctcccagttacagcggctgttggctcagcagcagaaggcgcagcct
cagaggagcgtgccttctgggggtcggcagcagcaggagcagcagggtcgatctcttagt
atgcagcaacagatgatgcaacagtcccgtcagcttgatccaaacctgttaatgaagcag
caaactccaccctctcaacagcagtcactccatcagccctccatgaaatccttccttgag
aatgtcataccccacactactcctgagctgcagaaagggccctcaccaatcaatgcattc
agcagcttccctataggcttctgtccaatttctacttcagaaattccaggaatgaactca
aacttgaatgtaaacctggatatgagcagtattaaagagccacaatctcggctgaggaaa
tggactacagtcgacagcatttcgatgaacacatccttagatcaaaactccagcaaacat
ggtgctatttcaagtggttttaggctggaagattctccgtttgttccttacgactttctg
aacagcagtaattcgccagccagtcctcccggatccattggggacggctggccccgtgcc
aaatcgcctaatggctctagcagtgttaactggcccccagagtttcgccctggtgagcca
tggaaaggttatccaaacatcgaccccgaaactgacccttacgtcactcctggcagtgtc
ataaacaatctctcaattaatactgtgcgggaagttgaccacctcagggacaggaacagt
gggtcatcctcatctttgaacaccacgctgccttcaactagtgcctggtcatccattcgt
gcctccaactacaatgtttccctcagcagtacagcacaaagcacttcagtagccagaaac
agtgattccaaatcaacgtggtctcctggatcagtcactaacacctctctggctcatgag
ctgtggaaggtccctttgccacctaaaagcatcactgctccgtcccgcccacctccaggg
ctgacaggccagaaaccacccctgtccacctgggataattcccttcgtctgggtggagga
tggggaaattctgatgccagatacacccctggttcaagctggggtgagagcagctcaggg
agaataacaaattggcttgttctaaaaaaccttacacctcagatcgacggctcaaccctg
cgtactctgtgcatgcagcacggcccactaataacattccacctgaacctcccacatggt
aatgctttggtccgttacagttcaaaagaagaggtagtgaaggcacaaaaatctctgcac
atgtgtgttttagggaacactactattcttgctgagtttgccagtgaagaggagattagt
cgcttctttgcacaaggccagtccctgactccgtctcctggctggcaatctctgggatcc
agccagagccgactcggatccatcgatggttcccattcgttctcaaaccgtaatgatcta
aatcactggaatggtgctgggctgtcgggaactagcagtggagaccttcatggcacttca
ctttgggggagccccaactattccacgagcctgtggggtgccccgagcagcaatgacacc
aggggaattagcagcccatcccccattaacgctttcctttccgttgaccacctgggtgga
ggtggagagtccatgtaa
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