Parus major (Great Tit): 107211290
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Entry
107211290 CDS
T04864
Symbol
NYX
Name
(RefSeq) nyctalopin isoform X1
KO
K08129
nyctalopin
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pmaj00535
]
107211290 (NYX)
Proteoglycans [BR:
pmaj00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
107211290 (NYX)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_14
LRR_9
LRRNT
LRRCT_2
DUF5886
Herpes_glycoH_C
Motif
Other DBs
NCBI-GeneID:
107211290
NCBI-ProteinID:
XP_033367887
Ensembl:
ENSPMJG00000010964
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All DBs
Position
1:complement(7229163..7248045)
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AA seq
485 aa
AA seq
DB search
MLLDPSSLLARPEMPENNQVILWVPQVHGVWACVRSCPPSCVCTPERSCSVLCDRAGLGQ
IPSEFPCEASSINLDKNSIKFLSERAFGTLPSLKSLSLNHNNISFITPGAFKGLPSLTEL
KMAHNEYIRYLHTRTFTALRRLVRLDLADCNLFNIPDRIFIELPALQELFCFQNNFRRIP
GAIRGMENLTHVYLERNRIEAVAYNSLQGLTKLKYLNLQDNKINVIHERAFQGCQRMEYL
YLNDNLISELPENSFDGLRRLKMLNLGGNFLRNISNTWFRDLGELEFLYLDRNRISYIEE
GAFENLTSLVALHLNSNNLTTLPFSVFEPVYFLGRLYLFRNPWECDCRIEWLKEWMENYR
LVRDIPCASPSSVAGIDLTDVLFERSPEGYCLDPVELNITSEGPAPSQEPWSTTESKFNS
LISKLLLQMGLPEEVANATEVYSNTTQPDGQTEGVSSGMGEERTKADSSSLYLPALFTVI
VLLCK
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgcttttagatccctcaagtttgcttgccagacctgaaatgcctgaaaataatcaagtg
atcctttgggtcccacaggtccatggggtgtgggcctgtgtgcgctcctgccctcccagc
tgtgtgtgcacgccggagaggagctgctccgtgctctgtgaccgtgctgggctggggcag
atccccagcgagttcccctgcgaagcctcttccatcaacctggataaaaatagcatcaag
ttcctgtccgagagggcctttgggacactgccttccctcaagtccctgtctctcaaccac
aacaacatctccttcatcactccaggggcgttcaaggggctgcccagcctgacggagctg
aagatggcccacaacgagtacattcgctatctccacactcgcaccttcaccgcgctccgg
cgccttgtgaggctggacctggctgactgcaacctcttcaacatcccagacaggatcttc
atcgagctgcctgctctgcaggagctgttctgcttccagaacaacttccgaaggatccca
ggtgccatcaggggcatggagaacttgacccatgtgtacctggagagaaataggatcgaa
gcggtggcctataactccctgcagggcctgactaagctgaaatacctgaatctgcaggac
aacaagataaatgtcatccatgagcgagcttttcagggctgtcagaggatggagtacctg
tacctgaatgacaacttgatcagtgagcttccagaaaactcctttgatggcctgaggcgc
ctgaagatgctcaacctgggggggaattttctcaggaacatttccaacacctggttccgg
gacttgggggagctggagttcctctacctggaccgcaacaggatcagctacatcgaggaa
ggggcttttgagaacctcaccagcctggtggcgctgcacttgaacagcaacaacctgacc
acgctgcccttctcggtgttcgagcccgtgtacttcctggggcgcctgtacctcttccgc
aacccctgggagtgcgactgccgcatcgagtggctcaaggagtggatggagaactacagg
ctcgtcagggatattccgtgtgcctccccctcctccgtggctggcattgatctgacggac
gtgctcttcgagaggtctcccgagggttactgcctcgacccggtggagctgaacatcacg
tccgaggggccggccccgagccaggagccttggtccaccacagagagcaagttcaacagc
cttatctccaaactcttgctccagatgggccttcccgaagaggtggcaaatgccactgag
gtgtacagtaacaccacgcagccagacggacagactgaaggggtttcttctggcatgggg
gaagaaagaaccaaggctgactcctcctccttgtacctcccagcactttttacagtgatt
gttctgctgtgcaaataa
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