Parus major (Great Tit): 107211335
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Entry
107211335 CDS
T04864
Symbol
CACNA1H
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj04010
MAPK signaling pathway
pmaj04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107211335 (CACNA1H)
04020 Calcium signaling pathway
107211335 (CACNA1H)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmaj04040
]
107211335 (CACNA1H)
Ion channels [BR:
pmaj04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
107211335 (CACNA1H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
107211335
NCBI-ProteinID:
XP_033373826
Ensembl:
ENSPMJG00000017548
LinkDB
All DBs
Position
14:complement(14107601..14213365)
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AA seq
2304 aa
AA seq
DB search
MLVILLNCVTLGMFQPCEDVECQSERCTILEAFDDFIFAFFAVEMVIKMVALGIFGQKCY
LGDTWNRLDFFIVMAGMMEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDT
LPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFLDRNFAMTYNLTFLHPYYRPDEAEE
NPFICSSHRENGMQRCSNIPSRKESKVECTLSMDSYSPSLASPEPSRNSCINWNQYYNVC
MAGDLNPHNGAINFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGS
FFMINLCLVVIATQFSETKQRENQLMQEQRARYLSNDSTIASFSEPGSCYEELLKYICHI
FRKVKRRTIRLYNNWQSKRRKKVNPNSGSGGQSQRSRRRITSIHHLIHHHHHHHHHHYHI
SNGSPRGPRANPEICELELQVMKPGRQLMLPPPASPRPQGPAAPRADAEAVHSVYHADCH
VEGPPGGCKGTGATTGSKAAGLGTHGSMNYPTILPSPSGKGGSAPLPKGKKNGNSPVAVV
NSPGSLGLDSYGKLQQLVGEHGLHRTPSRLSGLSAAGALPSAAGPRLSCELQDCPFCASL
LDDPEFALSDSDSNGDSDSNGVYEFTQDLRHGDHRDQLQQQRGRRRRKKKKAKERNKVIK
LWKAFGTKLKRIVESKYFNRGIMIAILINTLSMGIEYHEQPDELTNALEISNIVFTSMFA
LEMLLKLLAFGIFGYIKNPYNIFDGIIVVISVWEIIGQSDGGLSVLRTFRLLRVLKLVRF
MPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHLFGCKFSLKTDTGDTVPDRKNF
DSLLWAIVTVFQILTQEDWNVVLYNGMASTSSWAALYFVALMTFGNYVLFNLLVAILVEG
FQAEGDANRSDTDEDKTSANFEDEFEKLKDLRATEMKMYSLAVTPNGHLEARGAVPPPII
MRTAATPMPTPKCSPHLDSLHALGDSRRGSNASLDPTGYDQKSLSSLRSSPCTNWGTSSN
WGSRRSSWNSLGRAPSLKKKNQSGERESLLSGEGKGSTDDDSDDAKSSTLSRPSLPRRAE
SLDYRGSQELPELLRVPSVRQLGLGPAALLPAEFHDCNGKMGHAEFFLRVDGHKEDALDY
EDDMEDSYCYRIRKALEPYKPQWCKTHEDWSLYLFSPQNRFRVMCQKVIAHKMFDHVVLV
FIFLNCITIALERPDIDPLSTERIFLSVSNYIFTAIFVAEMMVKVVALGFFSGENTYLQS
SWNVLDGVLVFVSIIDIIVSMASAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVET
LISSLRPIGNIVLICCAFFIIFGILGVQLFKGKFYYCDGPDVKNITTKADCTNAHYKWVR
RKYNFDNLGQALMSLFVLSSKDGWVNIMYDGLDAVGIDQQPIQNHNPWMLLYFISFLLIV
SFFVLNMFVGVVVENFHKCRQHQEAEEARRREEKRLRRLEKKRRSKEMYLSEAQRRPYYA
DYSPARRSIHSLCTSHYLDLFITFIIGVNVITMSMEHYNQPKSLDEALKYCNYVFTIVFV
FEALLKLVAFGFRRFFKDRWNQLDLAIVLLSIVGITLEEIEMNAALPINPTIIRIMRVLR
IARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLDCSEENP
CEGLSRHATFTNFGMAFLTLFRVSTGDNWNGIMKDTLRECTREDKHCLSYLPVISPVYFV
TFVLIAQFVLVNVVVAVLMKHLEESNKEAKEDAEMDAEIELEMSRGSSAAGGSRSGAVAA
ESRALHGSQEHSKGKHQALGSSASLRPQDSQNLLTVRKISVSRMHSLPNDSYMFRPVTPA
KAPLPLHEVEMETYPCKAQRGSITSIRSQPVGTSSSLRVPAESLPPLRCPGHEGRHRWKV
LAPHGTPRSPALNKLLCRQEAVRTDSVDGQTPERKDSLQAEPGEPQPSAKQPQSTLTPSP
LHSPLPATPPRSPPSSPHRPLGPLARKHTCGQHGVPSRPPSPTSPTGPEGCQGEPSDLAD
EEVQHINSSAKDWAEEHSDPGSRSSSPFTSPAPSPVPLKNCSTSSLSRKEKDLKKFYSTD
SKGFLGKPSWADEQRRHSIEICPSGSAPDRAFQEPTEDKQRPPGHVQPEADYIHGARRKK
KMSPPCISIDPPMEDDGAAASRTKPSENTLLRRRTPSCEFPAYRESLELPESQPPCRGEH
LSIPNFSFEQLDGGSLSSLSELLDSAQSTPASADSEPKKTDHLKTQRGNGERSKELLGTA
KSPLRKQDLGPVTAATEEGADDPV
NT seq
6915 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgatcctgctcaactgcgtcaccctgggcatgttccagccctgcgaggacgtg
gaatgccagtcagagcgctgcaccatcctggaggcgtttgacgatttcattttcgccttc
tttgctgtggaaatggtcatcaagatggtggccctgggcatctttgggcagaagtgttac
cttggagacacctggaatcgcctggacttcttcatcgtcatggcagggatgatggaatat
tccctggacggacacaacgtgagcctctccgccatccgcaccgtccgcgtcctgcggcct
ctgcgcgccatcaacagggtcccaagtatgaggatcctggtcacgctgctgctggacact
ctgcccatgctgggcaacgtcctcctcctctgcttcttcgtcttcttcatcttcggcatt
gtgggggtccagctctgggcagggctgctgaggaacaggtgcttcctggacaggaatttt
gccatgacctacaacctgaccttccttcacccctactaccggccggacgaggcggaggag
aaccccttcatctgctcctcgcaccgcgagaacggcatgcagcggtgctccaacattccc
agcaggaaggaatccaaggtggagtgcaccctgagcatggattcctacagccccagcctg
gccagccccgagcccagcaggaattcctgcatcaactggaaccagtactacaacgtctgc
atggccggggacctcaacccccacaacggcgccatcaacttcgacaacatcggatacgcc
tggattgctattttccaggtgataaccctggaaggatgggtggacatcatgtattacgtg
atggatgcacactctttttacaattttatatattttatattgcttatcatagttggctcc
ttcttcatgattaacctgtgcctggtggtgatcgcgacccaattttcggagaccaagcag
cgggagaaccagctgatgcaggagcagcgggcgcgctacctgtccaacgacagcaccatc
gccagcttctcggagccgggcagctgctacgaggagctgctcaagtacatctgccacatc
ttcaggaaggtgaagcggaggacgatccgcctctacaacaactggcagagcaaacgccgc
aaaaaagtcaaccccaacagcggcagcggcgggcagagccagcggagcaggaggagaatc
acctccatccaccacctgatccaccaccaccaccaccaccaccaccaccactaccacatc
agcaacgggagcccgcgggggcctcgggccaaccccgagatctgcgagctggagctgcag
gtgatgaagccgggccggcagctgatgcttccccctcccgcatcgcccaggccgcagggc
ccggcggctcctcgcgccgacgccgaggccgtgcacagcgtctaccacgccgactgccac
gtggaggggccccccgggggctgcaagggcaccggggccaccacgggcagcaaggcggcc
gggctgggcacccacggcagcatgaactaccccaccatcctgccctcccccagcggcaag
ggcggctccgcgccccttcccaaagggaagaagaacgggaattctccggtggccgtggtg
aacagcccggggagtttggggctggattcgtacgggaagctgcagcagctggtgggagag
catggtctccaccgcacacccagccgtctgtcggggctgagcgcggccggggctctgccc
agcgctgctggcccacggctgagctgtgagctgcaggactgtcccttctgtgccagcctc
ctggacgaccccgagttcgccctcagcgactccgacagcaacggcgactccgacagcaac
ggcgtctacgagttcacacaggacctgcggcacggggaccaccgggaccagctccagcag
cagcggggcaggaggaggaggaagaagaagaaagccaaggagaggaacaaggtgatcaag
ctgtggaaggcgttcggcaccaaactcaagaggatcgtggagagcaaatacttcaaccgc
gggatcatgatcgccatcctcatcaacaccctcagcatgggcatcgagtaccacgagcag
ccagacgagctgaccaacgccttggagatcagcaacatcgtcttcaccagcatgtttgcc
ctggagatgctcctgaaactcctggcctttgggatctttggctacatcaagaacccctac
aacatcttcgacgggatcatcgtggtcatcagtgtctgggagatcatcgggcagtcggac
gggggcctgtccgtgctccgcacgttccggctgctccgcgtgctgaagctggtgcgcttc
atgcccgccctgcgccgccagctcgtggtgctcatgaagaccatggacaacgtggccacc
ttctgcatgctgctcatgctcttcatcttcatcttcagcatcctcggcatgcacctcttt
ggatgcaagttcagcctgaaaaccgacacgggagacacagttcccgacaggaagaatttt
gattccttactttgggccattgtgaccgtgttccagatcctgacgcaggaggactggaac
gtggtgctctacaacgggatggcctccacctcctcctgggccgccctctacttcgtggcc
ctgatgacctttggcaattacgtgctcttcaacctcctggtggccatcctggtggaagga
ttccaggcagagggagatgccaacaggtcagacacagatgaggacaagacatctgccaac
tttgaggacgagtttgagaagctgaaagacctcagagcaacagagatgaagatgtactcg
ctggctgtcacccccaacgggcacctggaggccaggggggccgtgcccccgcccatcatc
atgcgcacggcggccaccccgatgcccaccccgaagtgctccccacacctggactccctg
cacgccctcggggactcgaggaggggcagcaacgcctcgctggaccccacgggctacgac
cagaaatccttgtccagcctccgcagctccccctgcaccaactggggcaccagcagcaac
tggggcagccgccgctccagctggaacagcctgggcagggcgccgagcctcaagaagaag
aaccagtcgggagaacgggagtcgctgctgtccggagagggaaaaggcagcacggacgac
gactcggacgacgccaagtccagcacgctcagccggccctcgctgccccgccgggcagaa
tccctggattaccgcggctcccaggagctgccggagctgctccgggtgccctctgtgcgc
cagctggggctgggccccgccgccctgctgcccgccgagttccacgactgcaacggcaag
atgggccacgccgagttcttcctcagggtggacgggcacaaggaggacgccctggactac
gaggatgacatggaggatagttattgctaccggatccgcaaagccctggagccctacaaa
ccccagtggtgcaagacccacgaggactggtccctctacttgttttccccacagaacagg
ttccgagtgatgtgccagaaggtcattgcccacaaaatgttcgaccacgtggtgctggtc
tttatcttcctcaactgcatcaccatagctctggagagaccagacatcgaccccctgagc
acggaaaggatattcctgagtgtctctaattacatcttcactgccatcttcgtggctgaa
atgatggttaaggtggtagctcttggctttttctctggggagaacacgtacctgcagagc
agctggaacgtcctggatggagtcctggtctttgtatccatcattgacatcattgtgtcc
atggcatcagcaggaggagccaaaatcctgggagtccttcgtgtgttgaggcttctgcgg
accctgagacctctccgagtcatcagcagagccccaggtctgaagctggtggtggaaacc
ttgatctcctccttgaggcccattgggaatattgttctcatctgctgtgctttcttcatt
atctttgggattttaggggtccagctttttaaaggcaagttctactactgtgacggccct
gatgtcaaaaacatcaccacgaaggccgactgcaccaacgctcactacaaatgggtccgg
aggaagtacaacttcgacaatttggggcaggccctgatgtccctgtttgtcctctcctcc
aaggacggctgggtgaacatcatgtacgacgggctggacgccgtgggcatcgaccaacag
cccatccagaaccacaacccttggatgctgctctacttcatctccttcctgctcatcgtc
agcttcttcgtgctcaacatgttcgtgggggtggtggtggagaacttccacaagtgccgg
cagcaccaggaggcggaggaggcgcggcgccgggaggagaagcggctgcgccgcctggag
aaaaagcgcaggagtaaggagatgtacctgtctgaagcccagcgcagaccctactacgcc
gactactccccggccaggagatccatccacagcctgtgcaccagccactacctcgacctc
ttcatcaccttcatcatcggcgtcaacgtcatcaccatgtccatggagcactacaaccag
cccaagtccctggatgaagccctcaagtactgcaactatgtgttcaccatcgtctttgtg
tttgaggcactgctgaagttggtggcctttggtttccggaggttttttaaggacaggtgg
aaccagctggacttggccatagttctcctgtcgattgtggggatcacgctggaggagatc
gagatgaacgctgcccttcccatcaatcccaccatcatccgcatcatgagggtgctcagg
atagccagagtgctgaaactgctgaaaatggccacgggcatgagagctctgctggacacg
gtggtgcaagccctgccccaggtagggaaccttggcctactttttatgctcctgtttttt
atctatgctgccctgggagtggaattgtttggcaagctcgattgcagcgaggagaatccc
tgtgaaggcctgagccgccacgccaccttcaccaacttcggcatggccttcctcaccctc
ttcagggtgtccacgggggacaactggaacgggatcatgaaggacacgctccgggagtgc
actcgggaggacaagcactgcctcagttacctgcccgtcatctcccccgtctacttcgtc
accttcgtcctcatcgcccagttcgtcctggtcaacgtggtggtggcagtgctgatgaag
cacctggaggagagcaacaaggaggccaaggaggacgctgagatggacgctgagatcgag
ctggagatgtccagagggagcagcgctgccggcggcagcaggagcggggccgtggccgcg
gagagccgggcgctgcacgggagccaggagcattccaaggggaagcaccaagccctgggc
agttcagcctccctgaggccccaggattcccagaatctgctgacagtccgcaagatctcc
gtgtcccggatgcattccctgcccaacgacagctacatgttccggcctgtgaccccggcc
aaggccccgctgcccctgcacgaggtggagatggaaacctacccctgcaaagcccaaaga
ggatccatcacctccatccgctcccagcccgtggggacgagctcctcgctgagggtgccc
gcggagtcgctgccgccgctgcgctgccccggccacgaagggcggcaccgctggaaggtc
ctcgccccccacggcactccccgatctcctgctctcaacaagctgctctgcagacaggag
gccgttcggacagactcggtagacggacagactccggagcgcaaagacagcctgcaagca
gagcctggagagccccaaccatcagcaaagcagccccagagcaccctcacccccagccct
ctccattcccccctcccagccacccctccacgctcccccccgtcctccccgcaccggccc
ctcggccccctggcacggaagcacacgtgtggccagcacggcgttcccagccggccaccc
agccccaccagccccactggccccgagggctgccagggcgagccctcagacctggctgac
gaggaggttcagcacatcaacagctcggccaaagactgggcagaggagcactcggacccc
ggcagccgctccagctcgcccttcacctccccggccccttcccccgtgcccctcaagaac
tgcagcacaagcagcctctcccgcaaggagaaggacttgaagaagttctacagcaccgac
agcaagggcttcctcggcaagcccagctgggccgacgagcagcggcggcattccatcgag
atctgcccctccggcagcgccccggaccgcgccttccaggagcccaccgaggacaagcag
cggccccctggccacgtccagccggaggccgactacatccacggagcccggaggaagaag
aagatgagcccgccctgcatttctatagatcctcccatggaggatgacggcgcggcggcc
tcgcgcaccaaaccctccgagaacaccctgctgcggaggagaaccccgtcctgcgagttc
ccagcttaccgagaatccctggagctcccggagagccagcccccgtgccgaggggagcac
ctcagcatccccaacttctccttcgagcagctggacggcggctccttgagcagcctctcg
gagctgctggacagcgcccagtccacgccggcctccgcggactctgagccgaaaaagacg
gatcacttaaaaactcagcggggcaacggcgagaggagcaaagagctgctgggcaccgcc
aagagccccctgcggaagcaggatttgggccccgtgactgctgccacagaggaaggcgcg
gatgacccagtatag
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integrated database retrieval system
