Parus major (Great Tit): 107211353
Help
Entry
107211353 CDS
T04864
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
107211353 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pmaj01001
]
107211353 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pmaj04054
]
107211353 (CIITA)
Enzymes [BR:
pmaj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
107211353 (CIITA)
Protein kinases [BR:
pmaj01001
]
Serine/threonine kinases: Other
TAF1 family
107211353 (CIITA)
Pattern recognition receptors [BR:
pmaj04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
107211353 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_9
LRR_8
LRR_14
NB-ARC
NPHP3_N
RsgA_GTPase
nSTAND3
AAA_19
Motif
Other DBs
NCBI-GeneID:
107211353
NCBI-ProteinID:
XP_033373889
Ensembl:
ENSPMJG00000010362
LinkDB
All DBs
Position
14:5990259..6018609
Genome browser
AA seq
1178 aa
AA seq
DB search
MARLKVTLLVILVLLEGRFFLIFLFGIPPLIVLVFVISSFLLSLSVSPWQGWQFSSFFGT
ESRVKQQELKTRRQTMDSVFVPENGYLDLLHSDIDPLHLCTFFDPKLPGDEEGDFSTDLE
VDASNYEQLNNVDFPYENGDGFYPCSNTMDAYAKIAELVEYVLKDQQEKQVEDIFAGNLI
LDDIAAENTEKFPDIRMQTCLKRTFLGSAAEGYCDVSEPKYKKIAEAPAVSAGNGSFFAM
PLNSHPVSCTSLINQHMSFSAPAAHGLERNLVIPGLSEPLTSECLPASVKEYQENQNLAS
PPQQIFNFVLENSTSDVIVYPVLASSMETFMSPSFPVNLCDLETFQEVQDSIIPSEEPFK
RPEQVETFCSSLKDYFRDTCKSVTMEREVNLDHLFIDGTLVQTQTETKTGKNSAKAMEKE
LVTCSLQEKEKTTIDRSQIFQIPQRKDLETKVIVVLGKAGMGKSILVQKICQDWSSGEFS
QFEFVFWFDCKQISLPEKQYSLKELLLEFFVKPQEGSKEIFEYILQNPAKVLLIFDGFKG
LHDHENFPRCSASQPEKDLCSIKELLSGLIQKKLLNGCTLLFTARPKDKLYQYASKVDKT
IEIVGFSSQQRELYITKYFEESPYCDSALKLIKEHEYLFSHCYSPVMCRFVCFLCEAVLE
MGEKSLPSTLTEVFLKFFKQKIMLMQTDVTTTQNQESLATLARIAWCLGEKHQSAMKSDL
LPSKEVKEFALKYGFVLPFAFPRHSDSEEEEFGSTFSDFVIQNFLCALHLLLAEELKDKN
LTKYLSFLSKKKKPYNWLDLMPRFLVGLMFLQDDLYLCSLSNVDAKQSTKKQKTLLKYIR
RLQINTLCPERLLELFCCVYETQNNYLLQHMALRLEPDLSFLGIVLTPPDVHVLLSILKR
SRKEFSLDLRNSSIDMQGLQALVSLRNVTSFRASLSDTVRLWKSLEQTKEYELLKASTEK
FVLDPFKAKTMKDISDLSDLVEMQKMMNCVQEASGCTSYEIPAIRNLRKLEFALGPACGL
QGLLKLVKILSAFPSLQHLDLDALSENGIGDEGAKSLSEVFPTLTSLETLNLSQNKITDL
GAENLATALPSLSSLKTLSLYNNNICDFGAENLAKALPAMTSLRVLDVQYNKITGVGAQQ
LTDSLRKCPHIKNLVMWNPTIPYGVLEHLHQLDSRISV
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atggcaagattaaaggtaacactgcttgttatactggtgcttctagaagggaggttcttc
ttaattttcctctttggaattccccctctgattgttctggtgtttgttatttcctccttt
ctgctgtcactttctgttagcccttggcagggctggcagttctcatcattttttggtact
gaatccagagtgaaacagcaggaacttaagacaaggagacaaaccatggattcagtattt
gtacctgaaaatggatatcttgatttactgcacagtgatattgatccattgcatctgtgt
actttctttgatcctaagttacctggagatgaagaaggtgacttctctacagatcttgaa
gttgatgccagcaactatgaacagttaaataatgtggatttcccatatgaaaatggagat
ggcttctacccctgttccaacaccatggatgcttatgctaaaatcgctgaattagtagaa
tatgtgctcaaggatcagcaggagaagcaggtcgaagatatttttgcagggaaccttatt
ttggatgacattgctgctgaaaacactgagaaatttcctgacataaggatgcagacatgt
cttaaacgaactttcttaggctctgcagcagagggttactgtgatgtttcagaacccaaa
tataaaaaaattgcagaagcccctgcagtgtctgcagggaatggcagtttctttgctatg
cctctcaacagccacccagtgagctgcacttccttaattaaccagcacatgtccttttct
gctcctgctgcccatgggctggaaagaaacctcgtaattcctggattgtcagaacctttg
acctcagagtgtctaccagccagtgtgaaggagtaccaagagaatcaaaacttggcaagt
cctcctcagcagatatttaactttgttcttgaaaatagcacatctgatgttatagtatat
ccagtgctggcatcttctatggaaacattcatgtctccaagttttccagttaatttatgt
gatttagagacatttcaagaagttcaagattccataattccttctgaagaacctttcaaa
agaccagagcaagtggaaactttctgttcgtcacttaaagattatttccgagacacgtgc
aaatctgtgaccatggagcgggaagtaaacctggatcacctgttcattgatgggacactt
gttcaaactcaaactgaaacaaagactggaaagaacagtgcaaaagcaatggaaaaggag
ctggtaacctgcagcctgcaagagaaggaaaagacaaccattgatagaagccagatattt
caaatcccacaacgtaaagacttagagactaaagtgattgtggtgctgggtaaagcagga
atgggcaaaagcattctggttcagaagatctgccaggactggtccagtggagagttttct
cagtttgaatttgtattttggtttgactgcaaacaaataagcttgcctgagaaacaatac
agcctgaaagaactgctgcttgaattttttgtaaaacctcaagagggaagcaaagagatc
tttgaatatatattgcaaaatcctgctaaagtccttctgatttttgatgggtttaaagga
ttgcatgatcatgagaattttcctcgttgctcagccagccagcctgaaaaggatttgtgc
agtataaaggagctgctttcaggactcatccaaaagaagttactcaatggttgtacttta
ttatttacagcaagaccaaaagacaaactgtaccagtatgcatccaaagtggataagact
attgaaatagtaggattttcttctcagcagagagaattgtacataaccaaatattttgaa
gaatcaccctactgtgatagtgcactgaaattaatcaaagagcatgagtacttgttcagt
cattgttacagccctgttatgtgtagatttgtttgttttctctgtgaggcagtgcttgaa
atgggggagaaaagtcttccttcaactcttactgaagtcttcctaaaattttttaagcag
aagataatgcttatgcaaacagatgttacaaccacacaaaatcaagagagtcttgctacc
ctagcccgtatagcctggtgtcttggagaaaagcaccaaagtgccatgaaaagtgatctt
cttccttctaaggaagttaaagagtttgctctgaagtatgggtttgtcctgccatttgca
tttcccagacattcagatagtgaagaagaggaatttgggagcacattctctgattttgtc
attcagaatttcttgtgtgcactccaccttttgttagcagaagaactcaaggataaaaat
ctaacaaagtacctgtcttttctatccaagaagaaaaaaccttataactggttagatttg
atgcctcgatttttggttggtttgatgtttctccaggatgacctctatttgtgctctctt
tcaaatgtggatgcaaaacaatcaaccaagaaacagaagacactcttgaaatacattaga
aggctgcagattaatactctctgtccagagaggttgctggagcttttttgttgtgtttat
gaaacacagaacaattaccttctgcagcatatggccttaagactcgaaccagacttgtct
tttctgggcatagttcttacaccacctgatgtccatgtactgctttctattttgaaaagg
tcaagaaaagagttttccttggatttgcgaaacagcagcattgacatgcaagggctgcaa
gccttggtcagcctaaggaatgtgacatcattcagggcttccctcagtgacacagtcagg
ctctggaaatctttagaacagacaaaagaatatgaactgctgaaagcatccacagaaaaa
tttgttcttgatccctttaaggcaaagacaatgaaggacatcagtgacctctctgacctt
gtagagatgcagaagatgatgaattgtgttcaagaagcatctggttgcaccagctatgag
attcctgccattagaaacctcagaaaactcgaatttgcgctgggtccagcatgtggcctc
caaggattgctaaaactagtgaaaatactttcagcatttccatcacttcagcatttagac
cttgatgctctgagtgaaaatggcataggagatgaaggagcaaagagtctatctgaagtc
tttccaaccctgacatcattggaaacattaaatttatcacagaataaaataacagatctg
ggtgcagagaacctcgctacagctctcccttccttgtcttccttaaaaacactaagcttg
tacaataataacatttgtgattttggagcagaaaatctggcaaaggctcttcctgcaatg
acatctttaagagtgctagatgttcagtataacaaaataactggtgttggagcccagcag
ctgacggacagcctacgaaaatgtccccatataaagaacttggtgatgtggaatcccacc
attccctatggagttcttgaacaccttcaccagctggactccaggatcagtgtgtag
DBGET
integrated database retrieval system
