Parus major (Great Tit): 107211528
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Entry
107211528 CDS
T04864
Symbol
LHX5
Name
(RefSeq) LIM/homeobox protein Lhx5
KO
K18493
LIM homeobox protein 5
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmaj03000
]
107211528 (LHX5)
Transcription factors [BR:
pmaj03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
107211528 (LHX5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Prok-RING_1
ARM_UBR_1_2_3
Orbi_VP3
Motif
Other DBs
NCBI-GeneID:
107211528
NCBI-ProteinID:
XP_015499078
Ensembl:
ENSPMJG00000017306
LinkDB
All DBs
Position
15:9675592..9682740
Genome browser
AA seq
402 aa
AA seq
DB search
MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKCNLTEKCFSREGKLYCKNDFFRRF
GTKCAGCSQGISPSDLVRKARNKVFHLNCFTCMVCNKQLSTGEELYIIDENKFVCKEDYL
NSPSLKEGSLNSVSSCTDRSLSPDLQDPMQDDTKETDNSTSSDKETTNNENEEQNSGTKR
RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
LSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQGDYYGPGGNYDFFPHGP
PSQAQSPADSSYLQNSGPGSTPLGPLEPPLSGHHSSENQRYTDMISHPDTPSPEPGMTGS
LHPIPGEVFSGGPSPPFSMSSNSGYSGALSHPNPELSEAAVW
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgcattgtgcgggctgcgagaggccgattttggaccggttcctactgaacgtc
ttggacagggcatggcacatcaaatgcgtccagtgctgcgagtgcaagtgcaacctgacc
gagaaatgcttctccagggaagggaaactctactgcaaaaatgactttttcaggaggttt
ggaaccaaatgcgccggctgctcccaagggatctctcccagcgacctcgtccgaaaagcc
cggaataaagtctttcacctgaactgttttacctgcatggtctgcaacaagcagctctcc
acgggcgaggaactctatatcatcgacgaaaacaaatttgtttgcaaagaggattatttg
aactctcccagtttgaaggaaggcagcctcaactcagtgtcctcatgtacagacaggagt
ttgtccccggatctccaggaccccatgcaggacgacaccaaggaaacggacaactccacc
tcctcggacaaggagaccaccaacaacgagaacgaggagcagaactcgggcaccaagcgg
aggggtccccgcaccaccattaaagccaagcagctggagaccctcaaagctgccttcgcc
gccacccccaaacccacccgccacatccgggagcagctggcccaggagaccggcctcaac
atgagagtcatccaggtgtggttccagaaccgtcggtcgaaggagcggcggatgaagcag
ctgagcgcgctgggcgcccgccggcacgcgttcttccgcagcccccgcaggatgcggccc
ctcggcggccgcctcgacgagtccgagatgctcggctccacgccctacacgtactacgga
gattaccaaggtgactactacgggccgggaggcaactatgactttttcccccacgggcct
ccctcccaagcccagtccccggccgactccagctaccttcagaactcaggacccggctcc
acacccctgggacccttggagccccccctaagcggacaccactcctcagaaaaccaaagg
tacacggatatgatctcgcaccccgacaccccgagccccgagccggggatgacgggctct
ctgcaccccatcccgggggaggttttcagcggggggcccagccctcccttctccatgtcc
agcaatagcggctacagcggggctctgtcgcaccccaacccggagctcagcgaggcggcg
gtgtggtag
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