Parus major (Great Tit): 107211531
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Entry
107211531 CDS
T04864
Symbol
HNF1A
Name
(RefSeq) hepatocyte nuclear factor 1-alpha isoform X1
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmaj03000
]
107211531 (HNF1A)
Transcription factors [BR:
pmaj03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
107211531 (HNF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Telethonin
Homeobox_KN
KPBB_C
YebO
Motif
Other DBs
NCBI-GeneID:
107211531
NCBI-ProteinID:
XP_015499086
Ensembl:
ENSPMJG00000018011
LinkDB
All DBs
Position
15:10604483..10618812
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AA seq
674 aa
AA seq
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MVSKLTHLQVELLEALLESGLTKETLIKALSEAEPYGLQSESQRAINALQTEKGEPCPDI
PNLPNGMGESRVSEDETSDDGEEFTPPIMKELENLSPEEAAHQKAVVERLLQEDPWRVAK
MVKSYLQQHNIPQREVVDTTGLNQSHLSQHLNKGTPMKTQKRAALYTWYVRKQREVAQRK
YGNNCSPVSVSQRLLLSLAHPYSVLFSRKKFPCPFVLAEFTHAGQGILTDEPMGDDLPTK
KGRRNRFKWGPASQQILFQAYERQKNPSKEEREALVEECNRAECIQRGVSPSQAQGLGSN
LVTEVRVYNWFANRRKEEAFRHKLAMDTFSGPQPTSAPSLTPHSSSSLQPPPALSPSKVH
GVRYNQQPASEAESSSSNHHGNSSMVTTQTILHQVSPPGLEPSQNLLSTDTKLVSAPGGT
LPPVSTLTALHSLEQSPHTLSQQTQNLIMASLPGVMAIGAGETPSLTPAFTNTGASTLVI
GLASTQPQSVPVINSMGSSLTTLQPVQFSQQLHPSYQQPLMQQVQSHINQSPFMATMAQI
QNPHALYGPKSEVTQYTHTGLLPQTMVITDTANLSALTNLTPTKQAFTPDSETHTESGMH
TPVSQAPTIHLQNQDTTIQHLQPAPRLTSSPAVSSSSLVLYQSSDSTNSHSQLLPSTHNV
IETFISTQMASSTQ
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggtctcgaagctgactcatctccaagtggagctgctggaagcgctgctggagtcgggg
ctgaccaaggagaccttgatcaaggcactgagcgaagcggaaccctacgggctccagagc
gaaagccagcgcgctatcaatgccctccagactgaaaaaggggagccctgtcctgacatc
cccaacctccccaacggaatgggggagtccagggtatcagaagatgaaacctcagatgac
ggagaggaatttacccctccaataatgaaggagctggaaaacttgagccctgaggaggct
gctcaccagaaggctgtggtggaaagactattacaagaggatccctggcgagtagcaaag
atggtgaagtcttacctccagcagcacaacatccctcagcgtgaggtggtggacaccaca
ggtctgaaccaatcccacctctcacaacacctcaacaagggcactcccatgaagacccaa
aaacgggcagccctgtacacctggtacgtccggaaacagcgagaggtggcccagcgtaag
tatggcaacaactgctcccctgtctcagtctcacaaaggcttctgctctcccttgctcat
ccttactccgttttattttcaaggaaaaaattcccttgcccctttgtgcttgcagaattc
acacacgctggccagggtatactgacagacgagcccatgggagatgacctgcccaccaag
aagggaagaagaaaccgctttaagtggggtcctgcctcacaacagatcctgttccaagcc
tacgagaggcagaagaaccccagcaaagaagagagggaggcactggtggaagagtgcaac
agggcagagtgtattcagagaggtgtttccccatctcaggcccagggactgggctcaaac
ctggtgacagaggtcagggtttacaactggtttgccaatcgcaggaaggaggaggctttc
cggcacaagctggccatggacaccttcagcggaccacagcccacctctgccccttctcta
actccccacagctcttcctccctccagccaccacctgctctctcacccagcaaagttcac
ggagtgaggtacaaccagcagcctgccagtgaggcagaatcctccagcagcaaccaccat
gggaacagctccatggtgaccacccaaaccatcctgcatcaggtttctcctcctggactg
gagcccagccagaacctgctgagcacagacactaagctggtatcagctcctggcggaact
ctccctcctgtcagcaccctgactgccctgcacagcctagagcaaagcccacacacgctg
agccagcagacccagaacctgatcatggcatccctgccgggggtcatggcaatcggggcc
ggcgagaccccgtccctgacccccgccttcaccaacacgggagcctccaccctggtgatc
ggcctggcctcaacccagccccagagtgttcctgtaataaacagcatggggagcagcctc
actaccctgcagcctgtccagttctcccagcaactgcacccatcctaccagcagcccctc
atgcagcaagtccagagccacatcaaccagagccccttcatggctaccatggctcagata
cagaaccctcatgctctctacggccccaaatctgaagtgactcaatacacgcacacaggc
ctcttaccacaaaccatggtgataacagacactgccaatctcagcgccctgaccaacctg
acaccaactaaacaggcattcacacctgactcggagactcacactgagtctgggatgcac
acaccagtgtcacaggcaccaacaatccatctacagaaccaagacacaaccatccagcac
cttcagccagccccacgcctcacctcgagccctgctgtgtcctccagcagcctggtgctg
taccaaagctctgactccaccaacagccacagccagctgctgccatccactcacaacgtc
attgagaccttcatctccacacagatggcatcttccacccagtaa
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