Parus major (Great Tit): 107211542
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Entry
107211542 CDS
T04864
Symbol
ARVCF
Name
(RefSeq) armadillo repeat protein deleted in velo-cardio-facial syndrome isoform X1
KO
K28154
splicing regulator ARVCF
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmaj03041
]
107211542 (ARVCF)
Spliceosome [BR:
pmaj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
107211542 (ARVCF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_2
HEAT
HEAT_EZ
Arm_2
Atx10homo_assoc
Cnd1
Adaptin_N
Motif
Other DBs
NCBI-GeneID:
107211542
NCBI-ProteinID:
XP_015499104
Ensembl:
ENSPMJG00000014218
LinkDB
All DBs
Position
15:7068239..7316298
Genome browser
AA seq
1002 aa
AA seq
DB search
MDDYDIRSAASILASVKEQEARFERLTRALEEERRNVSLQLERANQPAERMSICNIGNGQ
PLATAWQQLVLQMKDLACTSDSHVHEQSPSNQTSIAMMQEPQEMVEETVTVEEDPGTPTS
HVSIVTSEDGTTRRTETKVTKMVKTVTTRTVRQVPLGPDGLPAMDGSSPMGSYTDSIDRR
YLKNGERFITPQASSTLTRSYNSYNDSYPESHEGQYRPYIGHDGYGDLSDNYGSLSRGVN
YRPRYAYVPGGTYRPDDGSFTLPSRRENYGPVAQPQVPVGSSVDLNRSQPERFQPEPYGL
EDDNRSLGVDDEGYELDPDYSTVNRRTSAGVPERGRPHKGRGYDDPIETEMVEERIPYLH
GGYAAPLAQPERGSMASIDRLGKRSPSIDSIRKDPRWRDPDLPEVIAMLSHPIDPVKSNA
AAYLQHLCYENDKIKKDVRHLKGIPILVGLLDHPKPEVHRKACGALRNISYGKDNENKVA
IKNCDGIPALIRLLRKTNDMEVRELITGTLWNLSSYEPLKMVIINHGLQTLTNEVIIPHS
GWESEPNEDSKPRDAEWTTVFKNTSGCLRNVSSDGAEARRRLRECDGLVDALLHALQSAV
GKKDTDNKSVENCVCIMRNLSYHVHKEVPGADKYQELDAGQTTGTGGSQKKKKDDAGCFG
GKKAKEEWFNQGKKNGDLDRNFDTLDLPKRSEAAKGFELLYQPDVVRLYLSILTESQNFN
TLEAAAGALQNLSAGNWMWSTYIRATVRKERGLPVLVELLQSDSDKVVRAVSIALRNLSM
DRRNKDLIGSYAMGELVRNLPSRQQRSAKNLEEDTVVAVLNTIHEIITDSSENARSLIQT
QGIQKLVAISKSSQSPRETKAASHILQMIWSYKELRNALQKDGWNKSHFQSVSAAPKGSK
GTAGRSGYDDSTLPLVDKSQDNEKSGSRDMIPMDELGPDGYSTIDHRDKERKYKTSDNTG
DASEKEPLKNDTNRKNINRSNRASVNLVDARDIKPQPVDSWV
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atggatgactatgatatcaggtctgctgccagcattttagcatctgttaaagagcaagaa
gctcgtttcgagcggctcacccgcgcacttgaggaagagcggcgcaatgtctccttgcaa
ctcgagcgtgccaatcagcctgcagagcgaatgagcatttgcaacattggcaatggtcag
cccctggcaaccgcctggcagcagctcgtactgcagatgaaggacctagcttgtacttct
gactcccatgtgcatgaacaaagccccagtaaccagacttcaatagcaatgatgcaagag
cctcaagaaatggtggaagagacagttactgtggaggaagacccagggactcccacttcc
cacgtgtctattgtcacgtctgaagatggaaccacaaggagaactgaaaccaaggttacc
aagatggtcaagacagtcaccacgaggacggtgcggcaggtgccgctggggccggacggg
ctgcctgccatggacggctcttcgcccatgggcagctacactgactccatcgacaggagg
tacctgaagaacggggagcgcttcatcaccccccaggcctcgtccaccctgacccgatcc
tacaacagctacaacgactcgtaccccgagagccacgagggccagtaccgcccctacatc
ggccacgacggctacggagacctctcggacaactacggcagcttgtcccggggcgtcaac
taccggccccgctacgcctacgtgccggggggcacctaccggcccgatgatggcagcttc
accctgcccagcaggagggagaactacggccctgttgcccagcctcaggtgccagtgggc
agcagcgttgacttgaaccgctctcagcccgagcgcttccagccggagccctatggactg
gaagatgacaaccgcagcctcggagtagatgatgaagggtatgaactggatccagattac
tccactgtgaacaggaggacgtctgcaggtgtgccagagagaggaagacctcacaaagga
aggggctacgatgaccccatcgagacagagatggttgaagagaggatcccgtacctgcac
ggcggctacgcggcgccgctggcccagccggagcggggcagcatggccagcattgaccgg
ctggggaagcgctcgccgtccatcgacagcatccgcaaggacccgcgctggagggacccc
gacctgcccgaggtcatcgccatgctcagccaccccatcgaccccgtcaagtccaacgcc
gcggcctatctgcagcacctgtgctatgagaacgacaaaatcaaaaaggatgtgaggcac
ctcaaagggatcccgatcctggtgggcctgctggatcatccaaagcctgaggtccatcgt
aaggcctgcggggctctcagaaacatctcctatgggaaggataatgaaaacaaagtggcg
ataaagaactgtgatgggatccctgcattgatcaggctgttgcgaaaaacaaacgacatg
gaagtcagagagctaattacaggcactctgtggaatttatcctcctacgaacccctgaag
atggtcatcatcaaccatggtctgcagacgctgaccaatgaggtgatcatcccccactcg
ggctgggagagcgagcccaacgaggactcgaagccgcgcgacgccgagtggacaacggtc
ttcaagaacacctctggctgcctgcggaatgtcagttcagatggagcagaagcacgcaga
agactcagagagtgtgatggcctggtggatgccctccttcatgctttgcagtctgcggtt
ggcaagaaggacacagacaataagtctgtggagaactgtgtgtgcatcatgcggaacctt
tcctatcatgtccacaaagaggtccctggagctgataagtaccaagaactagatgctggt
cagactacaggcacaggaggctcccagaagaagaagaaagatgatgctggttgttttggt
ggaaaaaaagcaaaagaggagtggttcaatcaaggaaagaagaacggagatttggacagg
aattttgatacacttgatttgcctaagcggtctgaagcagcaaaaggctttgaattattg
taccagccagatgtggtccgactatacctctccatcctcaccgaaagtcagaacttcaac
actctggaagctgcagcaggagctttgcagaaccttagtgctggcaactggatgtggtcc
acgtacatccgtgcgacggtgcggaaggagagggggctgccagtgctcgtggagctgctc
cagtctgactcggacaaggttgtgagggctgtgtccattgccctgagaaacctttccatg
gatcgtcgcaataaagatctcataggtagttatgccatgggtgagctggtaagaaatttg
cccagcaggcagcagagatctgcaaagaacctggaagaggatacagtggttgcagtgttg
aataccatccatgaaatcattactgacagctcagaaaacgcaaggtctctgatccagaca
cagggcattcagaagctggtagctatcagcaaatcaagccagtctcccagagaaacaaaa
gcagcatctcacattcttcagatgatctggagttacaaggagctacgaaatgcccttcag
aaggatgggtggaacaagtcacacttccagtctgtttctgcagctccaaagggctccaaa
ggtactgctggcaggtctggctacgatgacagcactttgcctctggtggataaaagtcaa
gataatgagaagtctgggagtcgtgatatgatacctatggatgaacttggtccagatgga
tattccaccatcgaccaccgggacaaggagcgcaagtacaagaccagtgataacacagga
gatgcctccgagaaggaacctttgaaaaatgacacaaataggaaaaacattaacaggagt
aacagggcttcggtgaatctggtggatgcccgtgacattaaaccccagcctgttgactcc
tgggtctaa
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integrated database retrieval system
