KEGG   Parus major (Great Tit): 107211642
Entry
107211642         CDS       T04864                                 
Symbol
UBC
Name
(RefSeq) polyubiquitin-C isoform X1
  KO
K08770  ubiquitin B/C
Organism
pmaj  Parus major (Great Tit)
Pathway
pmaj04120  Ubiquitin mediated proteolysis
pmaj04137  Mitophagy - animal
pmaj04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:pmaj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    107211642 (UBC)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    107211642 (UBC)
   04137 Mitophagy - animal
    107211642 (UBC)
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    107211642 (UBC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pmaj04121]
    107211642 (UBC)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pmaj04147]
    107211642 (UBC)
Ubiquitin system [BR:pmaj04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   107211642 (UBC)
Exosome [BR:pmaj04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   107211642 (UBC)
  Exosomal proteins of other body fluids (saliva and urine)
   107211642 (UBC)
  Exosomal proteins of colorectal cancer cells
   107211642 (UBC)
  Exosomal proteins of bladder cancer cells
   107211642 (UBC)
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 DUF2604 Rad60-SLD_2 TBK1_ULD Ubiquitin_5 Dsc3_N OTU1_UBXL
Other DBs
NCBI-GeneID: 107211642
NCBI-ProteinID: XP_015499374
LinkDB
Position
15:1692935..1694247
AA seq 229 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGN
NT seq 690 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaagaccctgactggcaagaccatcacccttgaggtggagcccagt
gacaccattgagaatgtcaaggccaagatccaagacaaggaaggcatccctcctgatcag
cagaggctgattttcgctgggaagcagctggaagatggccgtaccctgtctgactacaac
atccagaaagaatccactctgcacctggtgctgcgcctgcggggtggaatgcagatcttt
gtcaagaccctgacgggcaagaccatcacccttgaggtcgagcccagtgacaccattgag
aacgtcaaggccaagatccaggataaggaaggcatccctcctgaccagcagaggcttatt
tttgctggcaagcagctggaagatggccgtaccctgtctgactacaacatccagaaggaa
tctactctgcatcttgtgctgcgcctcagaggagggatgcagatctttgtgaagaccctg
actggcaagactatcactctggaagtggagcccagtgacaccattgagaacgtcaaggcc
aagatccaggataaggaaggcatccctcctgaccagcagaggctgatctttgctggcaag
cagctggaagatggccgtaccctgtctgactacaacatccagaaggagtcaactctgcac
cttgtcctgcgcctgcggggtggtaactga

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