Parus major (Great Tit): 107211804
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Entry
107211804 CDS
T04864
Symbol
SMARCB1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03082
ATP-dependent chromatin remodeling
pmaj03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107211804 (SMARCB1)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
107211804 (SMARCB1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pmaj01009
]
107211804 (SMARCB1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmaj03021
]
107211804 (SMARCB1)
03036 Chromosome and associated proteins [BR:
pmaj03036
]
107211804 (SMARCB1)
Protein phosphatases and associated proteins [BR:
pmaj01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107211804 (SMARCB1)
Transcription machinery [BR:
pmaj03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107211804 (SMARCB1)
SWI/SNF complex
107211804 (SMARCB1)
Chromosome and associated proteins [BR:
pmaj03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107211804 (SMARCB1)
PBAF complex
107211804 (SMARCB1)
SWI/SNF complex
107211804 (SMARCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
107211804
NCBI-ProteinID:
XP_015499773
Ensembl:
ENSPMJG00000018790
LinkDB
All DBs
Position
15:complement(11735755..11744942)
Genome browser
AA seq
349 aa
AA seq
DB search
MFRGSLYKRYPSLWRRLATVEERKKIVASSHENQRSHSPRRYHGYTTLATSVTLLKASEV
EEILDGNDEKYKAVSISTEPPTYLREQKAKRNNQWVPTLPNSSHHLDAVPCSTTINRNRM
GRDKKRTFPLCFDDHDPAVIHENASQPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPE
MFSEILCDDLDLNPLTFVPAIASAIRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLV
DQFEWDMSEKENSPEKFALKLCSELGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTV
EIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNTRRMRRLANTAPAW
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgtttcggggttccctgtacaagaggtacccctcactctggaggcgcctggccacggtg
gaagaaaggaagaagattgtggcctcttcacatgaaaatcagcggtctcacagtccccga
agatatcatggctatacaacattagccactagtgtgacgctgctgaaggcctctgaagtg
gaagagatcttggatggaaatgatgagaagtacaaggcagtgtctatcagcacagaacct
cctacctacctcagagaacagaaagcaaagaggaacaaccagtgggtgccaaccctgccc
aacagctctcatcacctggatgcagtgccatgctcaacaaccatcaacaggaaccgcatg
ggcagggataagaagagaacattccctctgtgctttgatgaccatgacccagcagtgatc
catgagaatgcatcccagccagaggtcctggttccaatcaggcttgatatggaaattgat
gggcagaaactccgtgatgcatttacgtggaacatgaatgaaaagctgatgacccctgaa
atgttctccgagattctttgtgatgacctggatttgaatcctctgacctttgtccctgct
attgcatctgccatccggcagcagatcgagtcgtacccaactgacagcatcctggaagat
cagtcagaccaacgagttattatcaagctgaacatccatgtaggaaacatctccctggta
gaccagtttgagtgggacatgtcagagaaggagaactcaccagagaagtttgccttgaag
ctgtgctcagagcttggcctgggcggggagtttgtcactaccattgcttacagcatccgg
ggacagctgagctggcaccagaagacctacgccttcagcgagaaccctttgccgactgtg
gagatcgcaattcgcaacacgggggacgctgaccagtggtgccctctcctggaaaccctc
acagacgctgagatggagaagaagatcagagaccaggacagaaacacaaggcgcatgaga
cgtttggccaatactgctccagcctggtaa
DBGET
integrated database retrieval system
