Parus major (Great Tit): 107211805
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Entry
107211805 CDS
T04864
Symbol
POLE
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A isoform X1
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03030
DNA replication
pmaj03410
Base excision repair
pmaj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107211805 (POLE)
03410 Base excision repair
107211805 (POLE)
03420 Nucleotide excision repair
107211805 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmaj03032
]
107211805 (POLE)
03400 DNA repair and recombination proteins [BR:
pmaj03400
]
107211805 (POLE)
Enzymes [BR:
pmaj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
107211805 (POLE)
DNA replication proteins [BR:
pmaj03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
107211805 (POLE)
DNA repair and recombination proteins [BR:
pmaj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
107211805 (POLE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
107211805
NCBI-ProteinID:
XP_015499774
Ensembl:
ENSPMJG00000019130
LinkDB
All DBs
Position
15:13624400..13658772
Genome browser
AA seq
2291 aa
AA seq
DB search
MGLRDGAEPEAARWGRRPGGPREPEDGAGSSRDDATALSAFKRLERVQRTDRLDALFGFE
RPAEPGERTGWLINMHPTEVLDEDRRSVSAVDYYFIQEDGSRFKVALPYKPYFYIATQKG
CEREVSSFLSKKFQGKIAKLETVPKEDLDLPNHLVGLKRNYIKLSFNTVEDLVKVRKEIS
PAVRKNREQDQANDVYTTMLSSALSGGSLSTDEEGASKKIANQMENIVDMREYDVPYHVR
LSIDLKIHVAHWYNVRYRGNTYPPEITRRDDLVERPDPVVLAFDIETTKLPLKFPDADTD
QIMMISYMIDGQGYLITNREIVSENIEDFEFTPKPEYEGPFCVFNEPDEAHLIQRWFEHV
QETKPTIIVTYNGDFFDWPFVEARAAAHGINMYQEIGFQKDSQGEYKASQCIHMDCLRWV
KRDSYLPVGSHNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYMYM
KYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAYHANIIFPNKQEQEFNKLTEDG
HVLDSETYVGGHVEALESGVFRSDIPCRFKMNPAAFDFLVQHVEKTLQHAIEEEEGLPLD
QVTNFQEVCDEIKAKLNSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATC
AACDFNKPGANCQRRMMWQWRGEFMPASRSEYHRIQQQLESEKFPPLFPDGPPRAFHELS
REEQAKYEKRRLADYCRKAYKKIHVTKVEERVTTICQRENSFYVDTVRAFRDRRYEFKGL
HKVWKKKLSAAVETGDASEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEM
AGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKSTNIKKPKVTIS
YPGAMLNILVKEGFTNDQYQELQDPASLTYITRSENSIFFEVDGPYLAMILPASKEEGKK
LKKRYAVFNEDGSLAELKGFEVKRRGELQLVKIFQSSVFEAFLKGSTLEEVYASVAKVAD
YWLDVLYSKAANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKD
AGLSCRFIISKKPEGSPVTERAIPLAIFQAEPSVCKHYLRKWLKSPSLQDFNIRAILDWD
YYIERLGSTIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDVYKQKKINELFISEG
KKQVLANRPVEGTASSQVGDIEDFGAVKIPQPLVPITNKRKRIPATEESQQLSQDLELSQ
SWREILGPPPPFGTTKEEHLVWLRFHQKKWELQARQRQERRKRRRLEDGGVVAGGGVVRD
APSKGLSSYLRRTARSILDLPWQVVQIAETRQPGLFRLWAVIGSDLHCIKLSIPRVFYVN
QRVPKPEEGAAYRKVNRILPRSNLVYNLYEYSVPEDMYQEHINEINADLSAPDIEGVYET
QVPLLFRALIHLGCVCMVSRQLVRHLAGREAETFNIEHLEMCSLAQFTYLEPGSIRHIYL
YHSSKGSKALLGLFIPSQRKAAVFVLDKVRSNQMPNLTTLFSVEREALLEKVGKELLPLD
KHTFEVRAETDPKAIYKGVQRLLLGYKDERRGPTLLAVQSNWDLKQLASGIPIIEEFPLV
PIRLVDDISYSVLDWQRHAARRMIRHYLNLDTCLSQAFEMSRYYHIPIGNLPDDISTFGS
DLFFSRHLRRHNHLLWLSPTARPDLGGKEADDNRLVMEFDERASVEINNPGCYSTVCLEL
DIQSLAVNTVLQSHHVNDMEGGSSMSISFDVIQQASLEDMVTGNQAANIPASYDETALCS
NTFRILKSMVVSWVKEITQYHNVYADNQVIHFYRWLHSPSSLLYDPALHRTLHNMMKKLF
LQLVAEFKRLGSSVVYANFNRIILCTKKRRIEDAISYMEYIINSIHSKEIFHSLTISFSR
CWEFLLWMDPANYGGIKGKVDSRIHYGEKDTSKRQALEEEEESEEEEEAREEEEEEGEPD
VEELLENSWNIAQFLPQAGSCQSYFLMIISAYIVAVYHNMKEELRCNTPGSTPIKRRSTS
QVSQETLGDLRAMSGMITFSQDYVANELTQSFFTITQKIQKKMAGSQNATEPSDMFPVLP
GSYLPLNNPALEFIKYVCKVLSLDANITNQVNKLRRDLLRLIEVGEFSEAAQFRDPCRSY
VLPEVICRNCNFCRDLDLCKDPALSQDRLVLPGWLCPNCHVQYDTDAIETALVEALQKKL
MAFVLQDLVCKKCHGVKDTHMPVYCSCAGDFTLTISSQAFMDHVSVFQNIARHYGMAYLL
ETIEWLLHTNL
NT seq
6876 nt
NT seq
+upstream
nt +downstream
nt
atgggactgagggacggcgccgagcccgaggcagcgcggtgggggcggcggccaggtggg
ccccgggagccggaggacggcgcggggtccagccgtgacgatgccaccgcgctgtctgca
ttcaagcgcctggagcgggtacagcgaacggaccgtctggacgcgctcttcggcttcgag
cggcccgcggagcccggagagcggacgggctggctcatcaacatgcacccgacggaggtg
ctggatgaggaccggcggtcagtgagcgcagtggactactacttcatccaggaggatggg
agccgcttcaaggtggccctaccctacaagccctacttctacattgctacccagaagggc
tgtgagcgggaagtgtcctccttcctctccaagaagttccaagggaagattgcaaagctg
gaaactgtccccaaagaagacttggacctgccaaaccacttggtgggcctgaagaggaac
tatatcaagctctccttcaacacagtggaggacttggtgaaggtgcggaaggagatctct
cctgctgtgaggaaaaacagggagcaggaccaggcgaatgatgtctacacgaccatgctg
tcaagtgctctgagtgggggcagtctaagcacagatgaggaaggagcctccaaaaaaatt
gccaaccagatggaaaacattgtggacatgcgggagtatgatgtcccctaccacgttcgc
ctttccatcgacctgaagatccatgtggctcactggtacaatgtgcgataccggggcaac
acctacccccccgaaatcacccgccgagatgaccttgtggaacggccggatcctgttgtt
cttgcctttgatattgaaacaaccaaactccctttgaagtttcctgatgcagacacagac
cagatcatgatgatctcctacatgattgatggacagggctatctgatcacaaacagggag
attgtctcagagaacattgaagattttgagtttactcccaaacctgagtatgagggtcca
ttttgtgtctttaatgaaccagatgaggctcatttaatccagagatggtttgaacatgtc
caggagaccaaacccaccatcattgtcacatacaatggagacttctttgactggcccttt
gtggaagcaagagcagcagctcatggaatcaatatgtatcaggaaattgggtttcagaag
gatagccagggagagtacaaagcatcccagtgcatccacatggactgtctgaggtgggtg
aagagagacagttacctcccagtgggaagtcacaacctgaaagcagcagctaaagcaaaa
ctgggttacgatccagtggagctggaccctgaggagatgtgccggatggccacagaggaa
cctcagacactggccacctactcagtgtccgatgctgttgctacttactacatgtatatg
aagtatgtgcatcccttcatttttgccttgtgtaccatcattcccatggagcctgatgag
gtattaagaaaaggatctgggacactgtgcgaggcactgctgatggttcaggcctaccat
gccaacatcatcttcccgaacaagcaggagcaggaattcaacaaacttacagaagatggg
catgtgctagactcagagacctatgtgggaggccatgtggaggcactggaatctggggtc
ttccgcagtgatattccctgccgcttcaaaatgaatcctgctgcctttgacttcctggtg
cagcatgtggagaagaccctgcagcacgccattgaggaagaggagggtctgcccttggat
caggtcaccaactttcaggaggtgtgtgatgaaatcaaggccaaactgaattccctgaag
gatgttcccaacagaattgagtgtcctcttatctatcatctggatgtgggggccatgtac
cccaacatcattctgaccaacaggttgcagccctcagccatggtggatgaggccacttgt
gctgcctgtgacttcaacaaaccgggtgccaactgtcagcgtcggatgatgtggcagtgg
agaggagagttcatgcctgccagccgcagtgagtaccaccgcatccagcagcagctggag
tcagaaaagttccctcctttgttccctgatggaccaccccgtgccttccacgagctttcc
cgggaggaacaagccaagtatgagaaaaggcgtctggcagattactgccgcaaggcatac
aagaagatccatgtcaccaaggtggaggagcgagtcactaccatctgccaaagagaaaac
tctttctatgtggacacggtgcgagcattccgggaccgccgatacgagttcaagggactg
cacaaggtgtggaagaagaagctgtctgcagcagtggagacaggagatgcctctgaagtg
aaacgctgcaagaacatggagatcctctatgactccctgcagctggctcacaagtgcatc
ctcaactccttctatggatatgtcatgcggaaaggagctcgctggtattccatggaaatg
gctggcattgtctgcttcacaggggcaaatatcatcactcaggccagagagctgatcgag
cagattgggagacctctagaactggataccgatgggatttggtgtgtccttcccaacagc
ttcccagagaactttgtcatcaagtcaaccaatatcaagaagccaaaagtgaccatctct
tacccaggtgccatgctgaacatcctggtgaaggaaggcttcacaaatgatcagtaccag
gaactgcaggatccagcctcactcacctatatcacacgctcagagaacagcatctttttt
gaagtggatggtccatacctggccatgatccttccagcctccaaagaagagggcaagaag
ctgaagaaaaggtatgctgtgttcaacgaggatgggtccctggctgagctgaaggggttt
gaggtgaaacgccggggagaactgcagctggtgaagatattccagtcatctgtgtttgaa
gcctttctaaaaggcagcaccttggaggaggtctatgcttccgtggccaaggtggctgat
tactggctggatgtgctctacagcaaggctgccaacatgcctgattcagagctgttcgag
ctcatctcagagaaccgatctatgtcacgcaaactggaggactacggggagcagaagtcc
acctccatcagcactgctaagcgcctggcagagtttttgggggaccagatggtgaaggat
gcagggctgagctgtcgcttcatcatttccaagaaaccagaagggtctccggtcactgag
agagccatcccccttgccatcttccaagctgagcccagcgtgtgcaagcactatctccga
aaatggctgaagagcccctcactgcaggacttcaacatccgtgcgatcctggactgggac
tactacattgagagattgggcagcaccatccagaaaatcatcaccattccagcagccctg
cagcaggtaaagaacccagtaccacgggtccgacacccagactggcttcacaagaaactc
ctggagaagaatgatgtgtacaaacagaaaaaaatcaatgagctcttcatttcagaaggc
aaaaaacaggttcttgccaatcggcctgtggaggggacagccagctcacaggtgggtgac
atagaggattttggggctgtcaagatccctcagccactggttcccattacaaataagcgg
aagcgtatccctgcaacagaggaaagccagcagctgtcccaggacctggagctgtcccag
tcctggcgggagattctgggcccacctccaccctttggcaccaccaaggaagagcatttg
gtctggctgcgcttccaccagaagaagtgggagctgcaggctcggcagcggcaggagcgg
cggaagaggaggcggctggaggatggtggggtggtggcaggtggaggagtggttcgcgat
gccccttccaaagggctgagcagttacctgcgccggacagcacgcagcatcctggacttg
ccctggcaggttgtgcagattgctgagactaggcagcctgggctcttccggctgtgggcg
gtgataggaagtgacctgcactgcatcaagctgagcatcccccgtgtcttctatgtcaac
cagcgtgtcccaaagcctgaggagggagcagcctacaggaaggtaaacaggatcctgccc
cgctcaaacttagtttataacttgtacgaatactctgttcctgaagacatgtaccaagag
cacatcaacgaaatcaacgcagacctctctgctccagacatcgagggagtgtatgagaca
caggtgccactgctcttccgtgccctgatccacctgggctgtgtgtgcatggtcagcagg
cagcttgttcgacacctggcagggcgagaggctgaaaccttcaacattgagcacctggag
atgtgctcactggcccagttcacttacctggagccaggaagcattcgccacatctacctg
taccacagctccaagggcagcaaggcactcctgggcctcttcatcccctcacagcgcaag
gctgctgtcttcgtgctggacaaggtacgcagcaaccagatgccaaatctcaccaccttg
ttctcggtggagcgtgaggctctgctagagaaggtgggcaaggagctgttgcccctggac
aaacacacctttgaggtgcgtgctgagactgaccctaaggccatctacaaaggtgtccag
cggctgctcttgggctacaaggatgagcgccggggccccacgttgctggctgtgcagtcc
aactgggacctgaaacagctggcaagtgggatccccatcattgaggagttccccttggtc
cccatccggctggtagatgacatcagttactcagtcctggactggcagcgccatgctgcc
cgccgcatgattcgccactacctcaacctggacacctgcctctcccaggcttttgagatg
agcaggtactaccacatccccattgggaacctccctgatgacatctccacctttggctct
gacctattcttttcacgccaccttcgtcgtcacaaccacctgttgtggctgtcccctacg
gcccgacctgacctgggggggaaggaggctgatgacaaccgcctggtcatggagtttgat
gagagggcctcagttgagatcaacaatcctggctgctactccacagtgtgtctggagctg
gacatccagagcctggctgtgaacacagtgttgcagtcccaccacgtgaatgacatggaa
ggaggctccagcatgagcattagcttcgatgtgattcagcaggcgtccttggaggacatg
gtgacagggaaccaagctgccaacatcccagccagctatgatgagactgccctctgctcc
aacactttcaggattctgaagagcatggtggtgagctgggtgaaggagattacacagtac
cacaacgtctatgcagacaaccaggtcattcacttttaccgctggcttcactctccttcc
tccctgctctatgacccggcactgcaccgcacactccacaacatgatgaagaagcttttc
ctgcagctggtggccgagttcaagcgtctgggctcctctgtggtctatgccaacttcaac
cgcatcatcctgtgcaccaagaagcggcgcattgaggatgccatcagctacatggagtac
atcatcaacagcatccattccaaggagatcttccattctttgaccatctcattctcccgc
tgctgggagtttttgctctggatggacccagcaaattatggaggtatcaagggaaaagtg
gattctcgcattcactatggagagaaggacaccagcaagaggcaggcattggaggaggag
gaggagagtgaggaagaggaggaagcgagggaagaagaggaggaggaaggggagccagat
gtggaggagctgctggagaacagctggaacattgcgcagttcctgccccaggctggctcc
tgccagagttacttcttgatgatcatatcagcatacatcgtagctgtgtaccacaacatg
aaggaggaactgcggtgtaacacccctgggagtacccccatcaagaggaggagcaccagc
caggtgtcccaggagactctgggggacctgagggccatgtctggcatgatcaccttctca
caagattatgtggccaatgagcttacccagagcttcttcaccatcacccagaagatccag
aagaagatggctggttcccagaacgccacagagccctcagacatgttcccagtcctgcct
ggctcctacctcccactcaacaacccagctctggagttcatcaaatatgtttgcaaggtc
ctctccctggatgccaacataaccaaccaggtgaacaaactacgccgggacctgctgcgc
cttatcgaagtgggcgagttctcagaagcagcccagtttcgggacccttgccgctcctat
gtgcttcctgaagtcatctgcaggaactgcaacttctgcagggatctggacttgtgcaag
gaccctgccctttcccaggacaggttggtactgcctggctggctctgccccaattgccat
gtgcagtacgatactgatgccatcgagacagcactggtggaagccctgcagaagaagctg
atggctttcgtgcttcaggacctggtgtgcaaaaagtgtcatggtgtgaaggatacacac
atgcctgtgtactgcagctgtgctggagacttcaccctcaccatctcctcccaggccttc
atggaccatgtcagtgtcttccagaacatcgcccggcactatggcatggcttacctgctg
gaaaccattgagtggttgctgcacaccaacctctag
DBGET
integrated database retrieval system
