Parus major (Great Tit): 107211882
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Entry
107211882 CDS
T04864
Symbol
FREM2
Name
(RefSeq) FRAS1-related extracellular matrix protein 2
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107211882 (FREM2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
pmaj04091
]
107211882 (FREM2)
Lectins [BR:
pmaj04091
]
C-Type lectins
Lecticans
107211882 (FREM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Cadherin_4
Big_9
HYR
Motif
Other DBs
NCBI-GeneID:
107211882
NCBI-ProteinID:
XP_015499945
Ensembl:
ENSPMJG00000014982
LinkDB
All DBs
Position
1:complement(63849377..63973982)
Genome browser
AA seq
3164 aa
AA seq
DB search
MQPLPAGLRRLPAGLLLVLAGCAWAGAVEPPLDRSAAVSSPWSPEAAPVVVANRGLRVPL
GRSAWLDPTRDLVLQVQPGDRCHLTVLDEDPLWQRPGRLSPRRFPCDFGAREVQYSHLGG
RSPARDRVRLQLRYDSPSRSLVLPLVLEVEVLFTQLEIVTRNLPLTVERLRGTSNPLDAR
SLEFAFEPGRQRCRVGLLPLLAGLPRYGEILNYPPAAAGGGGEAAGGGPMPSLMWDCEEF
LRLGLRYRHTAAGGSPNRDLVPLVAELREAAGGGALLKREYFQVLVRIRAGTENVAPKPS
FLAMLMMEVDQFVLTALTPDMLSAEDAESPPDLLLFNITSPFGPGQGHMVSTDDRSLPVT
SFSQRDVRELRIAYQPPMEDSDRERLFELELEVLDPEGAASEPFAFVIVVKPMNTLAPVV
TRNTGLVLYEGQSRPLSGPGPSPNLVVSDEDDLEQVQVSVVAGLRHGHLTLLEDTPGSAA
PRKHFTVAELAAGRVIYQHDGSESPLSDNIVLRLEDGGSRHRVEFLFPITLVPTDDQPPL
LNANTGLAMAEGETVPITTRALSATDIDSQDAILLFTVESGPVAGQLLLRQAQPPPGWEE
EEEEEGFSWRKVPGVAGSSLIYEKPVREWLQQDIVEGRLFYHHFGAHSPGPGVVLDQFIF
RVQDDNDPPNRSGPQTFVIRVHPVDRLAPELHSSSSLHLIVAEQQVTPLRRKHLCYTDQD
SVDRELRYTVIQPPTDTDSNHPPDAYGARLGSLVLTEDHSVEVTHFTQAQINHHKISYLP
PQEELGVAPHLIQFQYQVQDAAGNAAKGTFTIYLQPVDNQPPEITNTGFTLPEGGSHVLS
PTELDASDTDTELARLRFILTQAPRYGQLQLSGYSLVPGGTFGLEDIRQGRVVYVHSGAE
TNSDTCRLDVSDGVHFVPITLKMSVHPVDDEIPTLRLPPGTLGSYLDVLENGAAEITASV
IQGTDEDTDDFMLTFIVEDPPQHGSILVQGVPAERFSQRDLLDGTVVYAHTGGEIGLLPK
EDAFNLTLSDLSEKWRVRGNVVQGVSVLVTILPVDSQAPEIFVGEQFMVTEGDKRVITLA
HLRAEDVDTPGDDILCTIVAQPMSGYVENISPAPGSEKSRAGVAISAFTLKDLRQGHIFY
VQSIHKGVEPVEDRFALRCSDGINFSQRHFFPIVIVPINDEEPEIFLREFVVMEGMSLVV
DTPILNAVDADVPADELTFTITRLPRHGHIVNQLVNGTVLVESFTLDQITESSNILYEHD
DSETRVDSFEVQLTDGKHTIRKMVPVMIIPVDDETPRMAINDGLEIEIGETRTINNRILK
ATDLDSEDKTLTYVISYGPGQGLLQRIKPSGGVENITLGMNFTQDEVDRNLIRYVHFGQQ
GVRDLIKFDVTDGINPLIDRYFYVTIGSIDIVFPDVISKGVSLKEGGKVTLTTDLLSTSD
LNSPDENLVFTITRPPVRGHLECTDQPGVPISTFTQLLLAGNKVYYIHTSEDEVKMDSFE
FEVTDGYNPVFRTFRISISDVDNKKPVVTIHNLVVSENEYKLITPFELTAEDRDTPDTLL
KFVITQIPVHGQIMFNNSKPVTTFTKQDLNENLISYKHDGSESAEDSFSFTVTDGTHTDF
YVFPNTVFETRKPQTMKIRIMAVDNSIPQVVINKGAQTLRVLATGHIGFLITNKVLKVED
RDSLHATLKIRITEGPRHGFLIHLGKGNHSISQFTQADIDDMKICYVLRGGDNATSDIFH
FLVEDGGGNKLKNQHFRLNWAWISLEKEYYLVNEDSKYLDVVLKRRGYLGDTSFISISTR
DGTAKKDKDFRGKAQKQVQFNPGQTSATWRVRILSDGEHEHSESFQIVLSEPVMAILEFP
AASTVEIIDPGDESTVFIPQSTYTIEEDVGELFIPVRRSGDVSQELMVICYTQQGTASGT
APTSVLSYSDYISRPEDHISILRFDKDEQEKMCRIVIIDDSLYEEAETFDVFLSMPMGGR
IGAEFPSTRVTIVPDKDDEPAFYFGNDEYYVDESAGYVEVRVWRTGTDLSKAASVTVRSR
KSEPVTAEAGVDYVGISRNLDFSPGVNMQTFRVIILDDLGQPVLEGTEKFELVLRMPMNA
ALGEPSKTTIFINDSVSDLPKMQFKESVYVANENDGQISAMIYRSGDIRYRSTVRCYTRQ
GSAQVMMDFEERPNTDSSIITFLPGETEKPCTLVLMDDTFHEEEEELRLVLGTPRSDSSF
GASIGEQNETLIKIQDDADKAVIKFGETKFSVSEPKDTRQVAIVKIPVLRLGDTSKVSVV
RVHTKDGSATSGEDYHPISEEIEFREGETQHFVEIEVLFDGVREMREAFTVHLKPDENMV
AEIQTAKAIVYIEEMNSMADVTFPSVPQVASLLIYDDTSKAKDRTSPIAGYPVICITACN
PKYEDFDKTGSICASENINNTLTQYRWLVSAPTGPDGVTSPMKEVDFDTFFTSSKMITLD
SIYFQAGSRVQCAARAVNSDGNEGLELMSPIVTISTSEGLCQPRISGVVGAEPFSAKLRY
TGPEDPDYANLIKLTVTMPHIDGMLPVISTRELSNFELTLSPDGTRVGNHKCSNLLDYTE
VKTHHGFLTDSTKNPDVIGETIPYQYSPTIRGFNTLRFYRNLNLEACLWEFTSYYDMSEL
LTDCGGTIGTDGQVLNLVQSYVTLRVPLYVSYVFHSPVGVGGWQHFDLQSELRLTFVYDT
AILWKDGIGSPPEAELQGSLFPTSMRISEEGRLVVNFKTEARFHGLFVMSHPASSLTSMV
MSADHPGLTFSLSLIRSEPTYNLPVQQWSFVSDFAVRDYSGTYTVKLIACTTAPHQEYSL
PVICNPREPITFDLDIRFQQVSDPVAAEFSLNTQMFLLSKKTLWLSDGSMGFGQESDVAF
SEGDVIYGRVMVDPVQNLGDSFYCSIEKVFLCTGADGYVPKYNPSNTEYGCLADSPSLLY
RFKIVDKAQPETQATSFGNVLFNAKLAIDDPEAIPLVKQPGSDGFKVDSTPLFQVSLGRE
WYVHTIYTVRSKENTNRGIGKRSLEHQYHSLLSAGSPGASTQRRQKRGVEQAPELARDIG
AESNRGTNIQHIALDRTGKKQVPRREVALNGGLPRELNNQSAGISIVTIIGGAAAIFLAI
CLIAIIVLLLKWKLNSDKKEHTNESGSNEPMMLPHNYSNDSSEV
NT seq
9495 nt
NT seq
+upstream
nt +downstream
nt
atgcagcctctccccgccgggctgcggcggctgccggccggcttgctgctggtgctggcc
ggctgcgcctgggctggggcggtggagccgccgctagacaggagcgccgcggtctcctcg
ccgtggtcgccggaggcggcccccgtggtggtggccaaccgcgggctgcgggtgcccctg
ggccgctccgcctggctggaccccacgcgggacctggtgctgcaggtgcagccgggtgac
cggtgccacctcaccgtgctggacgaagacccgctgtggcagcgcccgggccgcctgagc
ccccggcgcttcccctgcgacttcggagcccgcgaggtgcagtactcgcacctgggcggc
cgcagccccgcccgggaccgcgtccgcctgcagctgcgctacgactcgccgagccgctcc
ctggtgctgcccctggtgctggaggtggaggtactcttcacccagctggagatcgtcact
cggaaccttcccctcaccgtggagcgtctgcggggcaccagcaacccgctggacgcccgc
agcctggagttcgccttcgagccgggccggcagcgctgccgggtggggctgctgccgctg
ctggccgggctgccccgctacggagagatcctcaactacccgccggcggcggcgggcggg
ggcggggaagcggcggggggcggcccgatgccgtccttgatgtgggactgcgaggagttc
ctgcgcctggggctgcgctaccggcacacggccgccggcggctcccccaaccgcgacctg
gtgccgctggtggccgagctgcgggaggcggcgggcggcggggcactgctgaagcgcgag
tacttccaggtactggtgcggatccgtgccgggactgagaacgtggcccccaaacccagc
ttcttggccatgctcatgatggaggtggaccagttcgtgctcaccgccctcactcctgac
atgctgtcagctgaggatgcagagtcaccacccgatctactgctcttcaacattacctct
ccctttggtcctggccaaggccacatggtcagcacagacgaccggagcttgcctgtcacc
tctttcagccagcgggatgtgcgggagctgcgcattgcctatcagccacccatggaggac
tctgatcgggagcggctctttgagcttgaactggaggtgttggacccagagggtgccgct
tcagagccctttgccttcgtgattgtggtgaagcccatgaacaccctggcacctgtggtg
acccgcaacactggcctcgtgctctatgaagggcagtcaaggcctctctcgggcccaggt
cccagtcccaacctggtggtcagtgatgaggatgaccttgagcaggtgcaggtgagtgtg
gtggcagggctgaggcatggccacctcactctcctggaagacaccccaggatctgctgcc
cctcgtaaacatttcacagtggctgagctggcagcaggccgagtcatttaccagcatgac
ggcagcgagtctccactcagtgacaacattgtgctgcggctggaagatggtggctctcgc
caccgcgttgagttccttttccccattaccctggtgcccactgatgaccagccaccccta
cttaatgctaacacagggcttgccatggctgagggtgaaacagtgcccatcaccacccga
gctcttagtgccactgacattgactcgcaggatgccatcctgctcttcacagtggagtct
ggccctgtggctgggcagctcctgctccgtcaagcacaaccacctcctggctgggaagag
gaggaagaggaggagggcttttcttggaggaaggtaccaggtgtagcagggagctccctc
atctatgaaaagccagtgagagagtggctgcaacaggacattgtggaagggcgtctcttt
taccatcactttggggctcacagccctggccctggggttgtgttggaccagttcatcttt
agagtccaggatgacaatgacccacccaaccgctctggaccacagactttcgtgatcagg
gtacatcctgtggacagattagccccagagctccatagtagcagcagcctgcatttaata
gttgcagagcagcaggtgactcctctgcggaggaagcacttgtgttacacagatcaggac
tcagtggaccgtgagcttcgctacacagtaatccagccccccactgacactgactccaat
caccctcctgatgcatatggagcacgccttggatccctcgtgcttactgaggatcactct
gtggaagttacacacttcacccaagcccagatcaaccatcacaagatctcatacctcccc
ccacaggaagagctgggggtggcccctcatttgattcagtttcagtatcaagtgcaagat
gcagctggcaatgcagccaaagggactttcaccatctacctgcagcctgtagataaccag
cctcctgaaatcactaatactggcttcactttgcctgagggaggcagccacgtccttagt
ccaactgagctggatgccagtgacacggacactgaacttgcccgtctcagatttatcctg
acccaggctcctcggtatggccagttgcagctctctgggtacagtctggttccaggaggt
acctttggcctggaggatatcagacaagggagggtggtgtatgtgcacagtggagctgag
accaacagtgatacctgcaggcttgatgtgagtgatggggttcattttgtgcccatcaca
ctgaaaatgagtgtgcatccagttgatgatgagattcctacactacggctgcccccgggc
acccttggttcctacctagatgtgctggagaatggtgctgctgaaatcacagctagtgtc
attcagggcacggatgaggatacagatgactttatgttgaccttcattgtagaggatcct
cctcagcatggcagcatcctggttcaaggggttccggcagagagattttcccagagagat
ctgctggatggcactgtggtatatgctcacactggtggtgaaataggccttctgcccaaa
gaggatgctttcaaccttaccttgtctgacctctctgagaagtggcgtgtcaggggcaat
gttgttcaaggagtttcagtcttggtgaccattcttcctgttgacagtcaagctccagag
atttttgtgggggagcagttcatggtgacggaaggtgacaaacgggtcattactcttgct
cacctcagggctgaagatgtggatacccctggtgatgatatactatgcacaattgttgct
cagcccatgtctgggtatgtagagaacatctctcctgccccaggatctgaaaaatccagg
gcaggtgtagctataagtgcttttaccttgaaggacctccgccaagggcatattttttat
gtccagagtatacataagggtgtagagcctgttgaagacagatttgccttgcgctgttct
gacggcatcaacttttcccagaggcacttcttccccattgttattgtgccgatcaatgac
gaagagcctgaaatcttcctgcgagaatttgttgtgatggagggcatgagcctggttgtt
gatacccctatcctcaatgcagttgatgcagatgtccctgctgatgagttaacattcaca
atcaccaggcttcccaggcacggccacattgtgaaccagcttgtcaatggaactgtccta
gtggagagcttcaccctggatcagataacagagagctccaacattctctatgaacatgat
gactctgagacgagggtggacagttttgaggtgcaactcacggatggtaaacacaccatt
aggaaaatggtacccgtcatgattattcctgtggatgatgagacgcccagaatggccatc
aatgatggtttggagattgaaataggggaaactagaactattaataacagaatattgaag
gctactgatcttgattctgaggacaaaaccttgacgtatgttataagttacgggccagga
caaggcctcttgcagaggataaagccttcaggtggagttgagaatatcaccctgggaatg
aacttcacccaagatgaagtggatagaaatttgattcgatatgtgcattttggccaacaa
ggagttcgtgatcttatcaagtttgatgtaacagatggaataaatcctctcattgaccgc
tacttttacgtgacaataggcagcattgatattgtcttcccagacgtcatcagcaaagga
gtttctctgaaggaaggagggaaggtaacccttactactgatttgctaagtaccagtgat
ctgaatagtccagatgagaacttagttttcaccattaccagaccacccgttcgtggccat
cttgaatgcacggatcagcctggggtgcccatctccactttcactcaactcctgttggca
ggcaataaagtctattacattcatacttcagaagatgaggtgaaaatggacagctttgag
tttgaggtgactgatggctataaccctgtgtttcgtactttcagaatttctatcagtgat
gtggacaataagaaacctgttgtcacaatccataacctggtggtgagtgaaaatgaatac
aaactgataaccccatttgagctgactgcagaagacagagatacacctgacacactgcta
aaatttgtcatcactcaaataccagttcatggccagatcatgttcaataactccaaacca
gtcaccaccttcactaaacaagatctgaatgaaaatctcatcagctacaaacatgatggc
tcagagtcagctgaggatagtttctctttcactgttacagatggcactcatactgatttc
tatgtcttccccaacactgtttttgaaacaaggaaaccccagactatgaagattcgaata
atggctgtggacaacagtatacctcaagttgtaataaataagggtgctcagactctccgt
gttctggccacaggtcatatcgggtttctgattaccaacaaagtgctcaaagtggaagac
agggacagtttacatgctactcttaagatcagaatcacagaaggtccacgccatggcttc
ctgattcacctggggaaaggcaaccatagcatcagccagttcacccaagctgatattgat
gatatgaagatatgctatgttttacgagggggtgacaatgccaccagtgacattttccat
ttcttggttgaagacggtggaggcaataagctgaagaatcaacattttcgcctaaactgg
gcatggatctctttagaaaaggagtattacttagtaaatgaagactccaaatatcttgat
gttgttcttaaacggagaggttacctgggagatacctcttttataagtattagcaccaga
gatggtactgccaagaaagataaagacttcagaggaaaagcccagaagcaagtgcagttt
aatcctggtcaaacctcagctacgtggcgagtacggatattgagcgacggtgaacatgag
cattctgagtcctttcaaattgttctttctgagcctgtcatggcaattctggaatttcct
gctgcatccacagtggaaattattgacccaggagatgaatcaacggtctttattcctcag
tccacctatactattgaagaagatgttggtgagttatttattccagtcagaagaagtgga
gatgtgagtcaggaactgatggtcatctgctacactcaacaaggaacagcctctggcact
gccccaacctctgtgctttcctactctgactacatatccaggccagaggatcacatcagc
attctacgttttgacaaagacgaacaagaaaaaatgtgtcggatcgtcatcatcgatgat
tccttgtatgaagaggctgagacctttgatgtttttctgagcatgcccatgggtggaaga
attggcgcagaattcccaagtactcgcgttaccattgtacctgacaaggatgatgaacca
gcattctactttggaaatgatgaatactacgttgatgagagtgctggctacgttgaggtc
cgtgtctggaggactggaactgatctgtccaaagctgcctctgttacggtgaggtctcgc
aaatccgaaccagtaactgcagaggctggagtagattatgtaggtatcagtcgtaatttg
gatttttcccctggagtcaatatgcagacgtttcgtgtgataattctggatgatcttgga
cagccagtgttagaaggaacagagaagtttgagcttgtgctaagaatgcccatgaatgct
gcccttggagaacccagcaagaccaccatcttcattaatgactcagtgtctgatttgcca
aagatgcagtttaaagaatctgtgtatgtagccaatgaaaatgatgggcagatttccgcc
atgatatataggagtggggatatccgatacagatccactgtgagatgctatacaaggcaa
ggttcagctcaggttatgatggactttgaagaacgtcctaatactgacagttccatcatc
acattccttcctggtgaaactgagaagccttgcacgctggtgcttatggatgatactttc
catgaggaggaggaagaactacgcctggttcttggcactccaagaagtgattcttccttc
ggtgcctctattggcgagcaaaacgagacgctgataaagattcaggatgatgcagacaag
gctgttattaagtttggtgagaccaaatttagtgtgagtgaaccgaaggacacaaggcaa
gtagcaattgtgaaaatcccggtgcttcgtctgggagacacttccaaagtttctgttgtg
agagttcatacaaaggatggatctgctacttctggagaagactatcaccctatatcagaa
gaaattgagttcagggagggtgaaacacagcactttgtggagattgaagttctctttgat
ggagtaagggagatgagagaagccttcactgttcacctgaaacctgatgagaatatggtt
gcagaaatacagacagccaaggccattgtttacattgaagaaatgaacagcatggcagac
gtcacttttccctctgtccctcaagttgcatctctgttgatatatgatgatacttctaaa
gccaaagacagaaccagtcccattgctggctatcctgtcatctgtatcacagcttgtaat
cccaagtatgaagactttgacaagactggttctatatgtgccagtgagaacatcaataac
actctgacacagtaccggtggcttgtaagtgcccccactggccctgatggtgtgaccagc
cccatgaaggaggttgactttgacaccttcttcacttcctctaagatgattacactcgac
tccatttactttcaagctggttctcgtgtccagtgtgcagctcgggctgtgaattcagat
gggaatgagggtcttgagcttatgagccctattgtcactataagcacatcagaaggtctt
tgtcagcctcgtatatcaggagtagttggagcagagccattctctgccaaactgcgctac
actggcccagaagatcctgactatgccaacctcatcaaactgacagtcacaatgccacat
attgatggcatgctgcctgttatttctacaagagagctctccaactttgagctgacactt
agccctgatggaactagagttggaaaccataagtgctccaacctgttggattacactgaa
gtcaagacccaccatggctttttaactgactctaccaagaatccagatgtgattggagag
accattccctatcagtacagcccaacaattagaggcttcaataccttgcgcttctaccgc
aacctgaacctggaagcatgtttgtgggagtttactagctactatgacatgtctgagctc
ctcacagattgtggaggcaccattgggacagatggacaggttctcaacctagtgcagtcc
tatgtcactctgagagtccctttgtacgtctcttacgttttccactctcctgtgggcgtc
ggaggctggcagcatttcgacctgcagtcagagctccggctgactttcgtgtatgacact
gccatcctgtggaaggatggcatcgggagcccacccgaagcagagctccaaggttccctg
ttcccgaccagcatgcgcatcagtgaagaggggcgcttggttgtcaacttcaagaccgaa
gcccggtttcatggtctgtttgttatgtcccatcctgcttcatctctgacttccatggtt
atgtcagctgaccacccgggcctcacctttagcctcagcctcatccgaagtgagccaacc
tacaacctgccagtccagcagtggagcttcgtttcagacttcgcggttcgagactattct
gggacgtacacggtgaagctgattgcctgcaccactgccccacaccaggagtacagcctg
ccagtgatctgcaacccgagagagcccatcacttttgatctggacatccgattccagcag
gtcagtgacccagtggctgctgaattcagcttgaacacccagatgttcctcctctccaaa
aagacgttgtggctgtctgatggctcgatgggctttgggcaagaaagtgacgttgctttc
tcagaaggtgatgtcatatacggtcgggtgatggtggatccagtgcagaatttgggtgat
tccttctactgtagcatcgagaaggttttcctgtgcacaggagccgatggatatgtaccc
aaatataatccatccaacactgaatatgggtgccttgcagattctccatcccttctgtac
aggtttaagattgtggacaaagctcagccagagacacaagccacaagctttggaaatgta
ctttttaatgcaaaacttgcaatagatgatcctgaagcaattccattagttaaacagcca
ggctctgatggatttaaagtagattcaactcctctgtttcaggtgtctttgggcagggag
tggtatgtccatacaatctacactgtgcgttccaaggagaacactaaccgtggaatcggc
aaaagaagcctggagcaccagtaccactccctcctcagtgctggcagcccaggagcatcc
acacagagaaggcagaagaggggagttgagcaggccccagaacttgcaagagacattgga
gcagagagcaaccgaggaacgaacatacagcacatagccctggatcgcaccggcaagaaa
caggtgccgcgaagggaggttgcactcaatggtggtctccccagggagctgaataaccaa
agtgcaggaatcagcatagtcacaatcattggtggagctgctgccatcttccttgccatc
tgcttaattgcaattattgttttgctgctaaaatggaaactaaattctgacaagaaggaa
catacaaatgagtcgggcagcaacgaaccaatgatgctaccacataattacagcaatgac
agctcagaggtttga
DBGET
integrated database retrieval system
