Parus major (Great Tit): 107211935
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Entry
107211935 CDS
T04864
Symbol
CACNA1B
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj04010
MAPK signaling pathway
pmaj04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107211935 (CACNA1B)
04020 Calcium signaling pathway
107211935 (CACNA1B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmaj04040
]
107211935 (CACNA1B)
Ion channels [BR:
pmaj04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
107211935 (CACNA1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
107211935
NCBI-ProteinID:
XP_015500017
Ensembl:
ENSPMJG00000009757
LinkDB
All DBs
Position
17:complement(8698360..8923712)
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AA seq
2310 aa
AA seq
DB search
MARFGDDLPTRYGGGGPAGAGRGSSRQGGPQAGQRMYKQSMAQRARTMALYNPIPVKQNC
FTVNRSLFIFSEDNVIRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPDGDKTPMSE
RLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILATAGTDFDL
RTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAIIGLEFYMGK
FHKTCFSNETGTTCREYWQGPNYGITNFDNILFAVLTVFQCITMEGWTDILYNTNDAAGN
TWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVENRRAFLKLRRQQQIERELNGYL
EWIFKAEEVMLAEEDKNAEEKSPLDVLKRAAIKKSKNDLIHAEEGEDHFTDICSVGSPFA
RASLKSGKNESSSYFRRKEKMFRFFIRRMVKAQSFYWVVLCVVALNTLCVAMVHYDQPEK
LTTALYFAEFVFLGLFLTEMSLKMYGLGPRNYFHSSFNCFDFGVIVGSIFEVIWAAVKPG
TSFGISVLRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQ
LFGGQFNFQDETPTTNFDTFPAAILTVFQILTGEDWNAVMYHGIESQGGVHSGMFSSIYF
IVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEEEMEEATNQKLALQKAKEVAEVSPMSA
ANISIAAKQQNSSKSKSVWEQRTSQIRMHNFRASCEALYNELDPEERWKVPYARHLRPDM
KTHLDRPLVVEPRSEGRNNITKLSPVDVQEVVEHPKATSADGAEAPRKHHRHREKEKPGE
QEKGDVTKDESGETGPANKEERHRQHRSRSKEVEGGSKEGKSDRSRGQEGGKRHHRRGSV
EEGAEKEHRRHRSHRHSSDRPGKEGNGTANGGRGERRSRHRGGSRSGNRDGEPSAKGENG
EEPHRRHRLRNRALSTYESVEKDSGEKEGEAGEKEHRNHQPKENQCELEASGSGSGPGTV
PVHTLPSTYLQKVPEQPEDADNQKNVTRMIQPPLDKTTTVNIPVTITAPPGETTVIPMNN
VEFESKTEEKKDVDDLTKNGPKPILPYSSMFILSPTNPIRRLFHYIVNLRYFEMVILIVI
ALSSIALAAEDPVQAESPRNDALKYLDYIFTGVFTFEMVIKMIDLGLLLHPGSYFRDLWN
ILDFIVVSGALVAFAFSGTKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLK
NVLNILIVYMLFMFIFAVIAVQLFKGRFFYCTDESKELEKDCRGQYLDYEKNEVEAQPRE
WKKYEFHYDNVLWALLTLFTVSTGEGWPTVLKHSVDATYEEQGPSPGYRMEMSIFYVVYF
VVFPFFFVNIFVALIIITFQEQGDKVMSECSLEKNERACIDFAISAKPLTRYMPQNKQSF
QYKMWKFVVSPPFEYFIMVMIALNTIVLMMKFYDAPEAYEEMLKCLNIVFTSMFSMECVL
KIIAFGVLNYFRDAWNVFDFVTVLGSITDILVTEIADTDNFINLSFLRLFRAARLIKLLR
QGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIALDDETSINRHNNFRT
FLQALMLLFRSATGEAWHEIMLSCLSNRACDPLSGLTKKECGSDFAYFYFVSFIFLCSFL
RSLFSCLLSLLSLPPPFHLLHCVAFSPTPSPFSPPQSDGISVSWCFCLHPCGPSGRISYT
DMYEMLRHMSPPLGLGKKCPARVAYKRLVRMNMPISPEDLTVHFTSTLMALIRTALEIKL
ASGGVKQHQCDAELRKEISLVWPNLSQKTLDLLVPPHKPDEMTVGKVYAALMIFDFYKQN
KNSREQVQPPGGLCQPGPVSLFHPLKATLEQTQPAAFNNAKAFLRQKSSASLNNGGALPP
PEGGIKESSSWGTQRTQDVFYETRSPAFERGHSEEIPIERVVEMKEISPTVANGEPQPGL
ESQGRAASMPRLAAETQPIPDTSPMKRSVSTLTPQRPHPMHLYEYSLERMPPEQGHHHHH
HRCHRRKEKKQKSLDRAAHHLADGQAVAQSGESSKDKKQERGRSQERKQHSSSSSEKQRF
YSCDRYGSRDRAQPKSADQSRPTSPNGGPEHGPHRQGSGSVNGSPLLSTSGASTPCRGRR
QLPQTPLTPRPSITYKTANSSPVHFTTFQTPTFSPGRLSRGLSEHNALLRGEQQPPPPAV
ARIGSDPYLGHRDASDSPQRAVPEDTLTFEEAVATNSGRSSRTSYVSSLTSQSHQIRRVP
NGYHYTLGLNSGPGARGRNYYHEADEDDWC
NT seq
6933 nt
NT seq
+upstream
nt +downstream
nt
atggctcggtttggggatgatctgccaacccgctatggaggtggagggccggccggggct
ggaagagggagcagccggcaaggtggcccccaagccggccaaaggatgtataaacagtcg
atggctcagagagccaggactatggctctctacaaccccatccctgtcaaacagaactgc
ttcacagtcaacagatccctcttcatcttcagtgaagataatgttatacggaaatacgcc
aagcgaataacagagtggcctccatttgaatacatgattttagctacaatcatagccaat
tgtattgtgctggctctggaacaacatttgccggatggagacaagacaccgatgtcagag
agattggacgacaccgagccgtactttattggaatattttgttttgaagctggtatcaaa
atcatcgctctgggctttgtttttcacaaaggctcttacctgcgcaacggctggaacgtg
atggatttcgtcgtggtcctcacagggattctggcgactgctgggacagattttgacctg
cggaccctgcgagccgtgcgggtgctgcggccgctgaaactcgtgtcgggaatcccaagc
ctgcaggtcgtcctcaagtccatcatgaaggccatggtgcccctgctgcagattgggctg
ctcctcttcttcgccatcgtgatgtttgccatcattgggctggagttttacatgggcaaa
ttccataaaacctgcttttccaacgagacagggaccacgtgcagggagtactggcagggc
cccaactacggcatcaccaactttgacaacatcctcttcgctgtgctcaccgtcttccag
tgcatcaccatggagggctggaccgacatcctctacaacacaaatgacgctgcaggaaat
acctggaactggctttacttcatccctctcatcatcattggctctttcttcatgctcaac
ttggtgctgggcgtcttatcaggtgaatttgccaaggagcgggagcgggtggagaaccgc
cgggcgttcctgaagctccgcaggcagcagcaaatcgagcgggagctcaacggatacctg
gagtggatcttcaaagcagaggaggtgatgctggccgaggaggacaagaacgcggaggag
aagtcccctctggacgtgttgaaaagagccgcaataaagaagagcaaaaacgacctgatt
catgcagaagaaggtgaggaccatttcacagacatttgctccgttgggtctccctttgcc
cgcgccagtttgaagagcggcaagaacgagagctcgtcctacttcaggaggaaagagaag
atgttccgcttcttcatccggcgcatggtgaaggctcagagcttctactgggtcgtgctc
tgcgtggtggccctcaacaccctctgtgtggccatggtgcactatgaccagcctgagaag
ctgaccactgctctctatttcgcagagtttgttttcctggggctgttcctcactgagatg
tccttgaagatgtatgggctggggccaaggaattatttccactcttcattcaactgcttt
gactttggggtgatcgtgggcagcatttttgaggtcatttgggccgcagtgaagccggga
acctcctttggcatcagcgtcctgcgagccctgaggctgctgaggatcttcaaagtgaca
aagtactggaattccctgaggaatctggtggtgtccttgctgaattccatgaaatccatc
atcagtttgcttttcctgctgttcctgttcatcgtggtctttgctctgctggggatgcag
ctcttcggaggacagttcaatttccaagatgaaactccaaccaccaatttcgacaccttc
cctgctgccatcctcacagtcttccagatcctgacaggggaggactggaatgctgtgatg
taccacgggatagagtcacagggcggcgtccactcgggaatgttctcctccatctacttc
atcgtcctcaccctgtttggtaactacaccctcctgaacgtcttcctggccatcgccgtg
gacaacctggccaacgcccaggagctgaccaaggacgaggaggagatggaggaagccacc
aaccagaagctggccctgcagaaggccaaggaggtggccgaagtcagccccatgtcggcg
gccaacatctccatagctgccaagcagcagaattcctccaaatccaagtcggtttgggag
cagaggacgagccagatccggatgcacaacttccgagccagctgcgaggccctgtacaac
gagctggaccccgaggagcgctggaaggttccctacgcccgccacctgcgcccggacatg
aagacacacctggaccggccgctggtggtggagccccgcagcgaaggcaggaacaacatc
accaagctgagccccgtggatgtccaggaggtggtggagcaccccaaagccacctctgct
gatggggcagaagcgccacggaagcaccaccggcaccgggagaaggagaagccgggagag
caggagaagggagacgtgaccaaggatgagagcggtgaaaccgggccggccaacaaggag
gagcggcacaggcagcaccgcagccgcagcaaggaggtggaagggggcagcaaggaaggg
aaaagcgaccgtagcagggggcaggaaggggggaagaggcaccaccggcggggctcagtg
gaggaaggggccgagaaggagcatcgcaggcaccgcagccaccggcactcctcagaccgg
ccgggcaaggagggcaacggcaccgccaacggcggccggggcgagcggcgctcccggcac
cgcggagggtcccgctccgggaacagggatggagaaccctcggccaagggggagaacgga
gaggagccccaccggcggcaccggctcaggaacagggccctgtccacctatgagtccgtg
gagaaggacagcggggagaaggaaggggaggctggagagaaggagcaccggaatcaccag
cccaaggagaaccagtgtgagctggaggccagtggcagtggcagtggccctggcactgtc
cctgtgcacaccctgcccagcacgtacctgcagaaggtgcctgagcagcccgaggatgcc
gacaaccagaagaacgtgacgaggatgattcagccccccctggacaaaaccaccactgtg
aacatccctgtcaccatcactgcccctccaggggaaaccactgtcattccaatgaacaac
gtggagtttgaaagcaaaacagaggagaagaaagacgtcgatgacctgacgaaaaatggg
cctaaaccaatcctgccttacagctccatgttcatcctcagtcccacaaacccgatccgg
cgcctgttccactacatcgtcaacctgcgctactttgagatggtgatcctgatcgtcatc
gccctcagcagcatcgccctggctgcagaggatcctgtccaggctgagtctcccaggaat
gatgctctgaaatacctggattatatatttacaggagtcttcacctttgagatggtgatc
aagatgattgacttggggctgctgctccaccctggctcctacttccgtgacctgtggaat
atcctggacttcattgtggtcagtggggccttggtggcttttgccttctcaggaaccaag
ggcaaggacatcaacaccatcaagtccctgcgagtcctgcgtgtgctcaggcccctgaag
accataaaacggctgccaaaactaaaggccgtctttgactgcgtggtgaactccctgaag
aacgtcctcaacatcctcatcgtttacatgctcttcatgttcatcttcgccgtcatcgcc
gtgcagctcttcaagggccgcttcttctactgcacagacgagtccaaggagctggagaag
gactgcaggggtcagtacctcgattatgaaaaaaatgaggtggaggcacagcccagggaa
tggaaaaaatacgaattccactacgacaacgtgctctgggctctgctcacactcttcacc
gtgtccacaggggaagggtggccaactgtgctgaagcactcggtggatgccacctacgag
gaacaggggcccagccctggctaccggatggaaatgtccatcttttacgtggtgtatttt
gttgtcttcccttttttctttgtcaacatctttgtggcgttaatcatcatcaccttccag
gagcaaggagataaagtgatgtcagagtgcagcctcgagaaaaacgagagggcctgcata
gactttgccataagtgccaagcccctgacccgctacatgcctcagaacaagcaatccttc
cagtacaagatgtggaaattcgtggtgtcccctccctttgagtattttatcatggtcatg
attgctctcaacaccatcgtcctcatgatgaagttctatgatgctccagaagcttatgaa
gaaatgctaaaatgcctgaatattgtgtttacatccatgttttccatggaatgtgtgctg
aagatcattgcctttggtgtgctgaattatttccgagatgcctggaatgtctttgatttt
gtaacagtgttgggaagtattactgatattttagtaacagagattgcggacacggacaac
ttcatcaacctcagcttcctgcggctcttccgggcagccaggctcatcaaactgctccgc
cagggctacaccatccgcatcctgctctggaccttcgtgcagtccttcaaggccttgcct
tatgtgtgtctcctcattgcaatgctcttcttcatctatgccattattggcatgcaggta
tttgggaatattgccttagatgatgaaacctccattaatcggcacaacaacttccggacc
ttcctccaagccctgatgctcctgttcaggagcgctacaggggaagcctggcacgagatc
atgttgtcctgcttgagcaacagagcctgtgaccccctctctggcctcaccaaaaaggaa
tgtggcagtgattttgcctatttctactttgtgtcgttcattttcctctgctccttcctg
agatctctgttttcttgtctgctttcccttctctctctccctcctccttttcatttgctc
cattgtgttgccttttcccccaccccttccccgttttccccgcctcaatccgatgggatt
tctgtgtcctggtgcttttgcctccatccctgtggtcccagcgggcgcatcagttacaca
gacatgtatgagatgctgagacacatgtccccacctctaggccttgggaagaaatgccca
gctcgtgttgcctataagcgcctggtgaggatgaacatgcccatctctcctgaggattta
actgtgcacttcacctccacgctgatggccctgatccgcacggccctggagatcaaactg
gcctcaggaggtgtgaagcagcaccagtgtgatgctgagctgaggaaggagatctcgctg
gtctggcccaacctgtcccagaagactctggatttgctggtgcctcctcacaaacctgat
gaaatgactgtggggaaggtctacgcagccctgatgatatttgacttctacaagcagaat
aagaacagcagggagcaagtccagccccctgggggcctgtgccagcccgggcctgtgtcc
ctcttccaccccttgaaggccaccctggagcagacgcagcccgcggccttcaacaacgcc
aaggccttcctgcgccagaagagctcggcctccctcaacaacgggggagccctgccaccc
ccggagggagggatcaaagagtccagttcctgggggacccagcgcacccaggacgtgttc
tatgaaaccaggagcccagcttttgagcggggccactccgaggagatccccattgagagg
gtggtagaaatgaaggagatcagccccacagttgccaacggagagccccagccaggcctg
gagagccagggcagggcggcctccatgccacggctggctgctgaaacccagcccatcccg
gacacgagccccatgaagcgctcggtctccacgctgaccccgcagcgccctcaccccatg
cacctctacgagtattccttggagcggatgcctccggagcagggccaccaccaccaccac
caccgctgccaccggcggaaagagaagaagcagaagtccttggacagggccgcccatcac
ttggctgatggccaagctgtagcccagtctggagagtcttccaaggacaagaagcaggag
cgtggccgctcccaggagaggaagcagcactcctcctcctcctctgaaaagcagcgcttc
tactcctgcgaccgctacggcagccgggaccgtgcccagcccaaatctgctgaccagagc
aggcccacctcccccaacgggggccccgagcacggcccgcacagacagggcagtggttca
gttaatgggagccccttgctgtcgacatctggtgctagtaccccctgccggggtcggagg
cagctcccacagactccactgaccccacgccccagcatcacttacaagaccgctaactcc
tcgcccgtgcacttcaccactttccaaacccccacgttctccccgggccgcctgagccgc
gggctgtccgagcacaacgcgctgctgcggggggagcagcagccgcccccgcccgccgtg
gcccgcatcggttccgacccctacctgggccaccgcgacgccagcgacagcccgcagcgc
gccgtgcccgaggacacgctcaccttcgaggaggccgtggccaccaactcgggccgctcc
tcgaggacttcctacgtctcctccctgacctcgcagtcgcaccaaatccgccgggtgccc
aatgggtaccactacacgctggggctcaactcgggccccggcgcccgaggacgcaattac
taccacgaagccgacgaggatgactggtgctag
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integrated database retrieval system
