Parus major (Great Tit): 107212196
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Entry
107212196 CDS
T04864
Symbol
TTF1
Name
(RefSeq) transcription termination factor 1 isoform X2
KO
K15225
transcription termination factor 1
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmaj03021
]
107212196 (TTF1)
Transcription machinery [BR:
pmaj03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
107212196 (TTF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
DUF7662
Poxvirus_B22R_N
SlyX
TcaA_2nd
Motif
Other DBs
NCBI-GeneID:
107212196
NCBI-ProteinID:
XP_015500688
Ensembl:
ENSPMJG00000006722
LinkDB
All DBs
Position
17:4216831..4229658
Genome browser
AA seq
705 aa
AA seq
DB search
MHICLTKKASAFPRGKIMKGKTDSDNFQVQDFVKKKKRKHNDSNNKHKNSEIVEDPELGH
ASQELFEDAAPEDRKKKKLKKKDEKQQASIENYFGTVEHEISNGTGTGGSLRKKRKRMGQ
DSADELSDVTCVPENQDCQEGAADSACSKKPKKKKKEKQPEVDEVNELSPSEEHSKGHKE
KPKKKKRREGSAQDVQEDTDGAAEQPPLEQDRGWPSDEDGGCDAASAISEVSMELPADFS
TPSKAADRAKKTPVRAKKAYKSRAFVEVGSSSDSDVMTPKASASYKKKKQKQQDNSFAEL
AGSDEVSVDGEEGLDPSSTSFMDLDTARQELEEFIPHVKNISDSSIKKMSGRDLIRFKEF
KKQGIAVKFGRFTQKENKQIQKNVEEFLSLTGVDGAEKLLFTSRYPEDKDTINQLKIKHN
FCEKISEGIPRPWRLVYYRARKMFDPNNYKGRYTMEEKEQLKKYQALHGNDWKKISELMS
RSNLSVAMKFSEIKSAINYGAWTKEETQRLMSAVKEVLRRKMNTENPNSLSSLEQSNTDL
WIDREKLYQSLPWTEIETRVESRYWRQCKQKWNSILMSKLNRQQQLHRGTTGLKAKINLI
KRLYETKAEDASEVNWDELSSAIGDVPRSYAQAKFYRLKVSSVPLWKRKTFSEIIDYLYE
KKLPELEEKLRKEEGKCHSFDNSVASQQQQIFRLSDIFDSSEESD
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgcacatctgtttgacgaagaaggcatcagcttttcctagagggaaaataatgaaaggc
aaaacggattcagataattttcaagtccaggattttgtcaagaaaaagaagagaaaacac
aacgattccaacaacaaacataaaaattctgaaattgtggaagatccagagcttggccac
gcatcccaagagctctttgaagatgcagcaccagaggacaggaaaaagaagaaactgaag
aaaaaggatgagaagcagcaggcttcgatagagaattactttgggactgtggaacatgaa
atcagcaatgggactggaacaggtggttccctgaggaagaagaggaagaggatgggtcag
gacagtgctgatgagctcagcgatgtcacttgtgttcctgagaatcaggactgccaggag
ggtgctgctgattctgcttgttctaaaaaacccaagaagaaaaagaaagaaaagcagcct
gaagtggatgaggtgaatgagctgtctccctctgaggagcacagcaagggccacaaagag
aaacccaaaaagaagaagaggagagagggcagtgcccaggacgtgcaggaggacacggat
ggagcagctgagcagccgcccttagagcaggacagggggtggccttcagatgaggatgga
ggctgtgatgctgcttctgccatcagtgaggtctctatggagctccctgctgatttttct
acacccagtaaagcagctgatagagctaaaaagactccagtacgtgctaaaaaggcatat
aagagccgcgcttttgtcgaggtgggaagctcttcagactctgatgtgatgacaccaaaa
gcctcagcatcatataaaaagaagaagcagaagcagcaagacaattcttttgctgaattg
gcaggctctgatgaggtcagtgtggatggtgaagaaggcctggacccttccagtacttca
ttcatggatttggatactgcaagacaagaactggaagagtttattcctcatgtgaagaat
atatcagacagttcaatcaagaaaatgtctggaagagacctaataaggtttaaggagttt
aaaaaacagggtattgctgtcaagtttggcagatttacccagaaggaaaataaacaaatc
cagaaaaatgttgaagagttcttatcacttactggagtggacggtgctgaaaaacttctg
tttacctcgagatatccagaagataaagacaccatcaatcaactgaaaataaaacataat
ttttgtgaaaaaatctctgagggcattccccggccctggagactggtatattatcgagca
aggaagatgtttgaccctaataattacaaaggaaggtatactatggaagaaaaagaacaa
ttaaagaagtatcaagctctgcatggcaatgattggaagaagatttctgagttgatgtcc
cgttctaacctctcagttgctatgaaattctctgaaatcaagtcagctatcaactatggt
gcttggacaaaggaggagacccagaggttaatgagtgcagtgaaggaagtgctgaggaga
aaaatgaacacagaaaatccgaattctctttcctcattggaacagtcaaacactgatcta
tggatcgaccgtgagaaactgtaccagtcactgccatggactgagattgaaaccagagtg
gaaagtcgatattggagacaatgcaaacagaaatggaattcaattttaatgagcaagttg
aacagacagcagcagttgcacagagggaccactggattaaaggccaagatcaatcttatt
aaaaggttgtatgaaacaaaagcagaggatgccagtgaagtcaactgggatgaactcagt
agtgctattggagatgttcctagatcctatgctcaagcaaagttttataggcttaaagtg
tcctctgtccctttatggaagagaaagactttttctgaaattattgactatctgtatgaa
aagaagctcccagaacttgaagaaaaactaaggaaagaagagggtaaatgccatagtttt
gacaattcagtagccagtcagcagcagcagattttccgactcagtgacatttttgactcc
agtgaagagagtgattaa
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integrated database retrieval system
