Parus major (Great Tit): 107212225
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Entry
107212225 CDS
T04864
Symbol
EXOSC2
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107212225 (EXOSC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmaj03019
]
107212225 (EXOSC2)
Messenger RNA biogenesis [BR:
pmaj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
107212225 (EXOSC2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
107212225 (EXOSC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
ECR1_N_2
EXOSC1
Motif
Other DBs
NCBI-GeneID:
107212225
NCBI-ProteinID:
XP_015500738
Ensembl:
ENSPMJG00000006842
LinkDB
All DBs
Position
17:complement(4852861..4856985)
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AA seq
294 aa
AA seq
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MAAVTMRLPAVRAPLDSSAPRGGEKHLVAPGDTITTDTGYMRGHGTYVEDEKLIASVAGV
VERVNKLVCVRALKARYNGEIGDVVVGRITEVQQKRWKVETNSRLDSVLLLSSINLPGGE
LRRKSAEDELAMRDYLQEGDLISAEVQSIFADGAVSLHTRSLKYGKLGQGVLVQVSPSLV
KRQKTHFHDLPCGASVILGNNGFIWIYPTPEQKDDEAGGYTANLEPVPLSDREVISRLRN
CIVALATHKMMLFDTSILYCYEASLPHQIKDILKPEVTEEIILEARQRLLDLEG
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtcaccatgaggctgccggcggtccgcgcccctctggattccagcgcgccc
cggggcggcgagaagcacctggtggcaccgggggacacgatcaccacggacacgggatat
atgaggggccacggtacttatgtggaggacgagaagctgatcgcctcggtggccggcgtg
gtagagagggtgaacaagctggtgtgtgtcagggcgctgaaggccaggtacaacggcgag
atcggcgacgtcgtggtcgggaggattacggaggttcagcagaagcgatggaaagtggaa
acaaattccaggctggattcagtcctgttactgtcgtctataaatttacctggtggggag
ctgagaaggaaatcagcagaagatgagcttgcaatgagggactacctgcaagaaggcgat
ctcatcagcgcagaggttcagtctatatttgctgatggggctgtatcgctgcacacccgg
agcctgaagtatgggaagcttggccagggtgtgctggttcaggtctctccctcccttgtg
aaacgccagaagactcatttccacgacctgccctgtggtgcatccgtgatcctcggcaac
aatggcttcatctggatctacccaactccggagcagaaggatgacgaggctggaggctac
actgccaacttggagccagttcccttgtctgaccgggaggtgatctcacggctccgaaac
tgcattgtggctctggctactcacaagatgatgctctttgacaccagcatcctgtattgc
tatgaagcatcccttcctcatcagatcaaggacattctgaaaccagaggtgacagaggag
atcattctggaagctcgacagaggttgctggatttggagggatag
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integrated database retrieval system