KEGG   Parus major (Great Tit): 107212225
Entry
107212225         CDS       T04864                                 
Symbol
EXOSC2
Name
(RefSeq) exosome complex component RRP4
  KO
K03679  exosome complex component RRP4
Organism
pmaj  Parus major (Great Tit)
Pathway
pmaj03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pmaj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    107212225 (EXOSC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmaj03019]
    107212225 (EXOSC2)
Messenger RNA biogenesis [BR:pmaj03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     107212225 (EXOSC2)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     107212225 (EXOSC2)
SSDB
Motif
Pfam: RRP4_S1 ECR1_N KH_6 ECR1_N_2 EXOSC1
Other DBs
NCBI-GeneID: 107212225
NCBI-ProteinID: XP_015500738
Ensembl: ENSPMJG00000006842
LinkDB
Position
17:complement(4852861..4856985)
AA seq 294 aa
MAAVTMRLPAVRAPLDSSAPRGGEKHLVAPGDTITTDTGYMRGHGTYVEDEKLIASVAGV
VERVNKLVCVRALKARYNGEIGDVVVGRITEVQQKRWKVETNSRLDSVLLLSSINLPGGE
LRRKSAEDELAMRDYLQEGDLISAEVQSIFADGAVSLHTRSLKYGKLGQGVLVQVSPSLV
KRQKTHFHDLPCGASVILGNNGFIWIYPTPEQKDDEAGGYTANLEPVPLSDREVISRLRN
CIVALATHKMMLFDTSILYCYEASLPHQIKDILKPEVTEEIILEARQRLLDLEG
NT seq 885 nt   +upstreamnt  +downstreamnt
atggcggcggtcaccatgaggctgccggcggtccgcgcccctctggattccagcgcgccc
cggggcggcgagaagcacctggtggcaccgggggacacgatcaccacggacacgggatat
atgaggggccacggtacttatgtggaggacgagaagctgatcgcctcggtggccggcgtg
gtagagagggtgaacaagctggtgtgtgtcagggcgctgaaggccaggtacaacggcgag
atcggcgacgtcgtggtcgggaggattacggaggttcagcagaagcgatggaaagtggaa
acaaattccaggctggattcagtcctgttactgtcgtctataaatttacctggtggggag
ctgagaaggaaatcagcagaagatgagcttgcaatgagggactacctgcaagaaggcgat
ctcatcagcgcagaggttcagtctatatttgctgatggggctgtatcgctgcacacccgg
agcctgaagtatgggaagcttggccagggtgtgctggttcaggtctctccctcccttgtg
aaacgccagaagactcatttccacgacctgccctgtggtgcatccgtgatcctcggcaac
aatggcttcatctggatctacccaactccggagcagaaggatgacgaggctggaggctac
actgccaacttggagccagttcccttgtctgaccgggaggtgatctcacggctccgaaac
tgcattgtggctctggctactcacaagatgatgctctttgacaccagcatcctgtattgc
tatgaagcatcccttcctcatcagatcaaggacattctgaaaccagaggtgacagaggag
atcattctggaagctcgacagaggttgctggatttggagggatag

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